메뉴 건너뛰기




Volumn 8, Issue , 2007, Pages

AphanoDB: A genomic resource for Aphanomyces pathogens

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACID SEQUENCE; APHANO DATABASE; APHANOMYCES; ARTICLE; COMPUTER PREDICTION; COMPUTER PROGRAM; DNA LIBRARY; EXPRESSED SEQUENCE TAG; FUNGAL GENETICS; GENETIC DATABASE; INFORMATION RETRIEVAL; LEGUME; NONHUMAN; PHYLOGENY; PLANT DISEASE; PROTEIN DOMAIN; COMPUTER INTERFACE; DNA SEQUENCE; GENE; GENE LIBRARY; GENETICS; GENOME; GENOMICS;

EID: 38949143702     PISSN: None     EISSN: 14712164     Source Type: Journal    
DOI: 10.1186/1471-2164-8-471     Document Type: Article
Times cited : (29)

References (33)
  • 1
    • 0030693871 scopus 로고    scopus 로고
    • Re-emergence of potato and tomato late blight in the United States
    • 10.1094/PDIS.1997.81.12.1349
    • Fry W Goodwin S Re-emergence of potato and tomato late blight in the United States Plant Dis 1997, 81:1349-1357. 10.1094/PDIS.1997.81.12.1349
    • (1997) Plant Dis , vol.81 , pp. 1349-1357
    • Fry, W.1    Goodwin, S.2
  • 2
    • 0033361145 scopus 로고    scopus 로고
    • The return of Phytophthora infestans, a potato pathogen that just won't quit
    • 10.1007/BF02357858
    • Fry W Smart C The return of Phytophthora infestans, a potato pathogen that just won't quit Potato Res 1999, 42:279-282. 10.1007/BF02357858
    • (1999) Potato Res , vol.42 , pp. 279-282
    • Fry, W.1    Smart, C.2
  • 3
    • 33748475118 scopus 로고    scopus 로고
    • Saprolegnia parasitica, an oomycete pathogen with a fishy appetite: New challenges for an old problem
    • 10.1016/j.mycol.2006.06.004
    • van West P Saprolegnia parasitica, an oomycete pathogen with a fishy appetite: New challenges for an old problem Mycologist 2006, 20:99-104. 10.1016/j.mycol.2006.06.004
    • (2006) Mycologist , vol.20 , pp. 99-104
    • van West, P.1
  • 4
    • 33751535847 scopus 로고    scopus 로고
    • Can Phytophthora quercina have a negative impact on mature pedunculate oaks under field conditions?
    • 10.1051/forest:2006047
    • Jönsson-Belyazio U Rosengren U Can Phytophthora quercina have a negative impact on mature pedunculate oaks under field conditions? Ann For Sci 2006, 63:661-672. 10.1051/forest:2006047
    • (2006) Ann For Sci , vol.63 , pp. 661-672
    • Jönsson-Belyazio, U.1    Rosengren, U.2
  • 6
    • 0034933304 scopus 로고    scopus 로고
    • Nonhost resistance to Phytophthora: Novel prospects for a classical problem
    • 10.1016/S1369-5266(00)00176-X 11418338
    • Kamoun S Nonhost resistance to Phytophthora: Novel prospects for a classical problem Curr Opin Plant Biol 2001, 4:295-300. 10.1016/ S1369-5266(00)00176-X 11418338
    • (2001) Curr Opin Plant Biol , vol.4 , pp. 295-300
    • Kamoun, S.1
  • 8
    • 33751583804 scopus 로고    scopus 로고
    • Phytophthora genomics: The plant destroyers' genome decoded
    • 10.1094/MPMI-19-1295 17153913
    • Govers F Gijzen M Phytophthora genomics: The plant destroyers' genome decoded Mol Plant Microbe Interact 2006, 19:1295-1301. 10.1094/ MPMI-19-1295 17153913
    • (2006) Mol Plant Microbe Interact , vol.19 , pp. 1295-1301
    • Govers, F.1    Gijzen, M.2
  • 9
    • 33644875275 scopus 로고    scopus 로고
    • Phytophthora functional genomics database (PFGD): Functional genomics of Phytophthora-plant interactions
    • 1347481 16381913 10.1093/nar/gkj119
    • Gajendran K Gonzales MD Farmer A Archuleta E Win J Waugh ME Kamoun S Phytophthora functional genomics database (PFGD): Functional genomics of Phytophthora-plant interactions Nucleic Acids Res 2006, 34:D465-70. 1347481 16381913 10.1093/nar/gkj119
    • (2006) Nucleic Acids Res , vol.34
    • Gajendran, K.1    Gonzales, M.D.2    Farmer, A.3    Archuleta, E.4    Win, J.5    Waugh, M.E.6    Kamoun, S.7
  • 12
    • 24044500593 scopus 로고    scopus 로고
    • Expressed sequence tags from the oomycete fish pathogen Saprolegnia parasitica reveal putative virulence factors
    • 1192801 16076392 10.1186/1471-2180-5-46
    • Torto-Alalibo T Tian M Gajendran K Waugh ME van West P Kamoun S Expressed sequence tags from the oomycete fish pathogen Saprolegnia parasitica reveal putative virulence factors BMC Microbiol 2005, 5:46-58. 1192801 16076392 10.1186/1471-2180-5-46
    • (2005) BMC Microbiol , vol.5 , pp. 46-58
    • Torto-Alalibo, T.1    Tian, M.2    Gajendran, K.3    Waugh, M.E.4    van West, P.5    Kamoun, S.6
  • 13
    • 34548128375 scopus 로고    scopus 로고
    • Root rot disease of legumes caused by Aphanomyces euteiches
    • 10.1111/j.1364-3703.2007.00413.x
    • Gaulin E Jacquet C Bottin A Dumas B Root rot disease of legumes caused by Aphanomyces euteiches Molecular Plant Pathol 2007, 8:539-548. 10.1111/ j.1364-3703.2007.00413.x
    • (2007) Molecular Plant Pathol , vol.8 , pp. 539-548
    • Gaulin, E.1    Jacquet, C.2    Bottin, A.3    Dumas, B.4
  • 14
    • 0034989488 scopus 로고    scopus 로고
    • Characteristics and frequency of Aphanomyces euteiches races 1 and 2 associated with alfalfa in the Midwestern United States
    • 10.1094/PDIS.2001.85.7.740
    • Malvick D Grau C Characteristics and frequency of Aphanomyces euteiches races 1 and 2 associated with alfalfa in the Midwestern United States Plant dis 2001, 85:740-744. 10.1094/PDIS.2001.85.7.740
    • (2001) Plant Dis , vol.85 , pp. 740-744
    • Malvick, D.1    Grau, C.2
  • 15
    • 0006262723 scopus 로고    scopus 로고
    • Use of polyclonal antibodies to detect oospores of Aphanomyces
    • Petersen A Use of polyclonal antibodies to detect oospores of Aphanomyces Mycol Res 1996, 100:495-499.
    • (1996) Mycol Res , vol.100 , pp. 495-499
    • Petersen, A.1
  • 16
    • 0031978181 scopus 로고    scopus 로고
    • Base-calling of automated sequencer traces using Phred. II. Error probabilities
    • 9521922
    • Ewing B Green P Base-calling of automated sequencer traces using Phred. II. Error probabilities Genome Res 1998, 8:186-194. 9521922
    • (1998) Genome Res , vol.8 , pp. 186-194
    • Ewing, B.1    Green, P.2
  • 17
    • 0032849859 scopus 로고    scopus 로고
    • CAP3: A DNA sequence assembly program
    • 310812 10508846 10.1101/gr.9.9.868
    • Huang X Madan A CAP3: A DNA sequence assembly program Genome Res 1999, 9:868-877. 310812 10508846 10.1101/gr.9.9.868
    • (1999) Genome Res , vol.9 , pp. 868-877
    • Huang, X.1    Madan, A.2
  • 18
    • 0030801002 scopus 로고    scopus 로고
    • Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
    • 146917 9254694 10.1093/nar/25.17.3389
    • Altschul SF Madden TL Schaffer AA Zhang J Zhang Z Miller W Lipman DJ Gapped BLAST and PSI-BLAST: A new generation of protein database search programs Nucleic Acids Res 1997, 25:3389-3402. 146917 9254694 10.1093/ nar/25.17.3389
    • (1997) Nucleic Acids Res , vol.25 , pp. 3389-3402
    • Altschul, S.F.1    Madden, T.L.2    Schaffer, A.A.3    Zhang, J.4    Zhang, Z.5    Miller, W.6    Lipman, D.J.7
  • 20
    • 0037250241 scopus 로고    scopus 로고
    • ToxoDB: Accessing the Toxoplasma gondii genome
    • 165519 12519989 10.1093/nar/gkg072
    • Kissinger JC Gajria B Li L Paulsen IT Roos DS ToxoDB: Accessing the Toxoplasma gondii genome Nucleic Acids Res 2003, 31:234-236. 165519 12519989 10.1093/nar/gkg072
    • (2003) Nucleic Acids Res , vol.31 , pp. 234-236
    • Kissinger, J.C.1    Gajria, B.2    Li, L.3    Paulsen, I.T.4    Roos, D.S.5
  • 23
    • 0034800374 scopus 로고    scopus 로고
    • InterProScan - An integration platform for the signature-recognition methods in InterPro
    • 10.1093/bioinformatics/17.9.847 11590104
    • Zdobnov EM Apweiler R InterProScan - an integration platform for the signature-recognition methods in InterPro Bioinformatics 2001, 17:847-848. 10.1093/bioinformatics/17.9.847 11590104
    • (2001) Bioinformatics , vol.17 , pp. 847-848
    • Zdobnov, E.M.1    Apweiler, R.2
  • 26
    • 38949180163 scopus 로고    scopus 로고
    • interpro2go file
    • interpro2go file http://www.geneontology.org/external2go/interpro2go
  • 27
    • 38949138366 scopus 로고    scopus 로고
    • Gene Ontology SQL database
    • Gene Ontology SQL database http://www.geneontology.org/GO.downloads.shtml
  • 28
    • 0033194958 scopus 로고    scopus 로고
    • Nomenclature committee of the international union of biochemistry and molecular biology (NC-IUBMB), Enzyme Supplement 5 (1999)
    • 10.1046/j.1432-1327.1999.nomen.x 10491110
    • Nomenclature committee of the international union of biochemistry and molecular biology (NC-IUBMB), Enzyme Supplement 5 (1999) Eur J Biochem 1999, 264:610-650. 10.1046/j.1432-1327.1999.nomen.x 10491110
    • (1999) Eur J Biochem , vol.264 , pp. 610-650
  • 29
    • 38949191882 scopus 로고    scopus 로고
    • ec2go file http://www.geneontology.org/external2go/ec2go
    • Ec2go File
  • 30
    • 0037805576 scopus 로고    scopus 로고
    • The KEGG database
    • discussion 101-3, 119-28, 244-52 12539951
    • Kanehisa M The KEGG database Novartis Found Symp 2002, 247:91-101. discussion 101-3, 119-28, 244-52 12539951
    • (2002) Novartis Found Symp , vol.247 , pp. 91-101
    • Kanehisa, M.1
  • 31
    • 0034523499 scopus 로고    scopus 로고
    • MaskerAid: A performance enhancement to RepeatMasker
    • 10.1093/bioinformatics/16.11.1040 11159316
    • Bedell JA Korf I Gish W MaskerAid: A performance enhancement to RepeatMasker Bioinformatics 2000, 16:1040-1041. 10.1093/bioinformatics/ 16.11.1040 11159316
    • (2000) Bioinformatics , vol.16 , pp. 1040-1041
    • Bedell, J.A.1    Korf, I.2    Gish, W.3
  • 32
    • 5044247757 scopus 로고    scopus 로고
    • Estimating and comparing the rates of gene discovery and expressed sequence tag (EST) frequencies in EST surveys
    • 10.1093/bioinformatics/bth239 15059814
    • Susko E Roger AJ Estimating and comparing the rates of gene discovery and expressed sequence tag (EST) frequencies in EST surveys Bioinformatics 2004, 20:2279-2287. 10.1093/bioinformatics/bth239 15059814
    • (2004) Bioinformatics , vol.20 , pp. 2279-2287
    • Susko, E.1    Roger, A.J.2
  • 33
    • 0001677717 scopus 로고
    • Controlling the false discovery rate: A practical and powerful approach to multiple testing
    • Benjamini Y Hochberg Y Controlling the false discovery rate: A practical and powerful approach to multiple testing J R Statist Soc 1995, 57:289-300.
    • (1995) J R Statist Soc , vol.57 , pp. 289-300
    • Benjamini, Y.1    Hochberg, Y.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.