메뉴 건너뛰기




Volumn 17, Issue 2, 2008, Pages 284-296

Revealing biogeographical patterns by nonlinear ordinations and derived anisotropic spatial filters

Author keywords

Anisotropic spatial autocorrelation; Floristic survey; FLORKART; Germany; Hierarchicalvariance partitioning; Isomap; Nonlinear dimensionality reduction; PC(An)NM; Sampling artefacts

Indexed keywords

ANISOTROPY; AUTOCORRELATION; BIOGEOGRAPHY; CLUSTER ANALYSIS; EIGENVALUE; ENVIRONMENTAL GRADIENT; FAUNISTICS; FLORISTICS; GEOGRAPHICAL DISTRIBUTION; MODELING; ORDINATION; PRECIPITATION (CLIMATOLOGY); SAMPLING BIAS; SPECIES OCCURRENCE; TEMPERATURE; VASCULAR PLANT;

EID: 38949111356     PISSN: 1466822X     EISSN: 14668238     Source Type: Journal    
DOI: 10.1111/j.1466-8238.2007.00368.x     Document Type: Article
Times cited : (31)

References (59)
  • 4
    • 0037099954 scopus 로고    scopus 로고
    • All-scale spatial analysis of ecological data by means of principal coordinates of neighbour matrices
    • Borcard, D. & Legendre, P. (2002) All-scale spatial analysis of ecological data by means of principal coordinates of neighbour matrices. Ecological Modelling, 153, 51-68.
    • (2002) Ecological Modelling , vol.153 , pp. 51-68
    • Borcard, D.1    Legendre, P.2
  • 6
    • 0023520729 scopus 로고
    • Nonlinear ordination using flexible shortest path adjustments of ecological distances
    • Bradfield, D.E. & Kenkel, N.C. (1987) Nonlinear ordination using flexible shortest path adjustments of ecological distances. Ecology, 68, 750-753.
    • (1987) Ecology , vol.68 , pp. 750-753
    • Bradfield, D.E.1    Kenkel, N.C.2
  • 8
    • 0038106091 scopus 로고    scopus 로고
    • Czech National Phytosociological Database: Basic statistics of the available vegetation-plot data
    • Chytrý, M. & Rafajová, M. (2003) Czech National Phytosociological Database: Basic statistics of the available vegetation-plot data. Preslia, 75, 1-15.
    • (2003) Preslia , vol.75 , pp. 1-15
    • Chytrý, M.1    Rafajová, M.2
  • 10
    • 0032091512 scopus 로고    scopus 로고
    • Non-linear dimensionality reduction techniques for unsupervised feature extraction
    • De Backer, S., Naud, A. & Scheunders, P. (1998) Non-linear dimensionality reduction techniques for unsupervised feature extraction. Pattern Recognition Letters, 19, 711-720.
    • (1998) Pattern Recognition Letters , vol.19 , pp. 711-720
    • De Backer, S.1    Naud, A.2    Scheunders, P.3
  • 11
    • 0032877527 scopus 로고    scopus 로고
    • Extended dissimilarity: A method of robust estimation of ecological distances from high beta diversity data
    • De'ath, G. (1999a) Extended dissimilarity: A method of robust estimation of ecological distances from high beta diversity data. Plant Ecology, 144, 191-199.
    • (1999) Plant Ecology , vol.144 , pp. 191-199
    • De'ath, G.1
  • 12
    • 0032849056 scopus 로고    scopus 로고
    • Principal curves: A new technique for indirect and direct gradient analysis
    • De'ath, G. (1999b) Principal curves: A new technique for indirect and direct gradient analysis. Ecology, 80, 2237-2253.
    • (1999) Ecology , vol.80 , pp. 2237-2253
    • De'ath, G.1
  • 13
    • 34147120474 scopus 로고
    • A note on two problems in connexion with graphs
    • Dijkstra, E.W. (1959) A note on two problems in connexion with graphs. Numerische Mathematik, 1, 269-271.
    • (1959) Numerische Mathematik , vol.1 , pp. 269-271
    • Dijkstra, E.W.1
  • 14
    • 14844358016 scopus 로고    scopus 로고
    • Modelling geographical patterns in species richness using eigenvector-based spatial filters
    • Diniz-Filho, J.A.F. & Bini, M.L. (2005) Modelling geographical patterns in species richness using eigenvector-based spatial filters. Global Ecology and Biogeography, 14, 177-185.
    • (2005) Global Ecology and Biogeography , vol.14 , pp. 177-185
    • Diniz-Filho, J.A.F.1    Bini, M.L.2
  • 15
    • 27744502935 scopus 로고    scopus 로고
    • Biodiversity science evolves
    • Dirzo, R. & Loreau, M. (2005) Biodiversity science evolves. Science, 310, 943.
    • (2005) Science , vol.310 , pp. 943
    • Dirzo, R.1    Loreau, M.2
  • 16
    • 33745213566 scopus 로고    scopus 로고
    • Spatial modelling: A Comprehensive framework for principal coordinate analysis of neighbour matrices (PCNM)
    • Dray, S., Legendre, P. & Peres-Neto, P.R. (2006) Spatial modelling: a comprehensive framework for principal coordinate analysis of neighbour matrices (PCNM). Ecological Modelling, 196, 483-493.
    • (2006) Ecological Modelling , vol.196 , pp. 483-493
    • Dray, S.1    Legendre, P.2    Peres-Neto, P.R.3
  • 18
    • 18444395902 scopus 로고    scopus 로고
    • Connecting fine- and broad-scale species-area relationships of Southeastern US Flora
    • Fridley, J.D., Peet, R.K., Wentworth, T.R. & White, P.S. (2005) Connecting fine- and broad-scale species-area relationships of Southeastern US Flora. Ecology, 86, 1172-1177.
    • (2005) Ecology , vol.86 , pp. 1172-1177
    • Fridley, J.D.1    Peet, R.K.2    Wentworth, T.R.3    White, P.S.4
  • 20
    • 0035673991 scopus 로고    scopus 로고
    • A comparison of self-organizing map algorithm and some conventional statistical methods for ecological community ordination
    • Giraudel, J.L. & Lek, S. (2001) A comparison of self-organizing map algorithm and some conventional statistical methods for ecological community ordination. Ecological Modelling, 146, 329-339.
    • (2001) Ecological Modelling , vol.146 , pp. 329-339
    • Giraudel, J.L.1    Lek, S.2
  • 21
    • 33845354872 scopus 로고    scopus 로고
    • Spatial modeling on ecology: The flexibility of eigenfunction spatial analysis
    • Griffith, D.A. & Peres-Neto, P.R. (2006) Spatial modeling on ecology: The flexibility of eigenfunction spatial analysis. Ecology, 87, 2603-2613.
    • (2006) Ecology , vol.87 , pp. 2603-2613
    • Griffith, D.A.1    Peres-Neto, P.R.2
  • 22
    • 8344231589 scopus 로고    scopus 로고
    • Efficient Locally Linear Embeddings of Imperfect Manifolds
    • (ed. by J.G. Carbonell & J. Siekmann), Springer, Berlin
    • Hadid, A. & Pietikäinen, M. (2003) Efficient Locally Linear Embeddings of Imperfect Manifolds. Machine learning and data mining in pattern recognition (ed. by J.G. Carbonell & J. Siekmann), pp. 188-201. Springer, Berlin.
    • (2003) Machine Learning and Data Mining in Pattern Recognition , pp. 188-201
    • Hadid, A.1    Pietikäinen, M.2
  • 26
    • 33746600649 scopus 로고    scopus 로고
    • Reducing the dimensionality of data with neural networks
    • Hinton, G.E. & Salakhutdinov, R.R. (2006) Reducing the dimensionality of data with neural networks. Science, 313, 504-507.
    • (2006) Science , vol.313 , pp. 504-507
    • Hinton, G.E.1    Salakhutdinov, R.R.2
  • 27
    • 33845765151 scopus 로고    scopus 로고
    • Using self-organizing maps to explore patterns in species richness and protection
    • Hopton, M.E. & Mayer, A.L. (2006) Using self-organizing maps to explore patterns in species richness and protection. Biodiversity and Conservation, 15, 4477-4494.
    • (2006) Biodiversity and Conservation , vol.15 , pp. 4477-4494
    • Hopton, M.E.1    Mayer, A.L.2
  • 28
    • 0003891604 scopus 로고
    • (Vol. 12) (eds) Akateeminen Kirjakauppa, Helsinki vols 1
    • Jalas, J., Suominen, J., Lampinen, R. (Vol. 11ff.) & Kurtto, A. (Vol. 12) (eds) (1972-1999) Atlas Florae Europaeae, Vols 1-12. Akateeminen Kirjakauppa, Helsinki.
    • (1972) Atlas Florae Europaeae , vol.12
    • Jalas, J.1    Suominen, J.2    Lampinen, R.3
  • 31
    • 0041654220 scopus 로고
    • Multidimensional scaling by optimizing goodness of fit to a nonmetric hypothesis
    • Kruskal, J.B. (1964) Multidimensional scaling by optimizing goodness of fit to a nonmetric hypothesis. Psychometrika, 29, 1-27.
    • (1964) Psychometrika , vol.29 , pp. 1-27
    • Kruskal, J.B.1
  • 32
    • 33846039745 scopus 로고    scopus 로고
    • Incorporating spatial autocorrelation may invert observed patterns
    • Kühn, I. (2007) Incorporating spatial autocorrelation may invert observed patterns. Diversity and Distributions, 13, 66-69.
    • (2007) Diversity and Distributions , vol.13 , pp. 66-69
    • Kühn, I.1
  • 33
    • 17044455031 scopus 로고    scopus 로고
    • The flora of German cities is naturally species rich
    • Kühn, I., Durka, W. & Klotz, S. (2004) The flora of German cities is naturally species rich. Evolutionary Ecology Research, 6, 749-764.
    • (2004) Evolutionary Ecology Research , vol.6 , pp. 749-764
    • Kühn, I.1    Durka, W.2    Klotz, S.3
  • 34
    • 33747585561 scopus 로고    scopus 로고
    • Relating geographical variation in pollination types to environmental and spatial factors using novel statistical methods
    • Kühn, I., Bierman, S.M., Durka, W. & Klotz, S. (2006) Relating geographical variation in pollination types to environmental and spatial factors using novel statistical methods. New Phytologist, 172, 127-139.
    • (2006) New Phytologist , vol.172 , pp. 127-139
    • Kühn, I.1    Bierman, S.M.2    Durka, W.3    Klotz, S.4
  • 35
    • 1542680971 scopus 로고    scopus 로고
    • Nonlinear projection with curvilinear distances: Isomap versus curvilinear distance analysis
    • Lee, J.A., Lendasse, A. & Verleysen, M. (2004) Nonlinear projection with curvilinear distances: Isomap versus curvilinear distance analysis, Neurocomputing, 57, 49-76.
    • (2004) Neurocomputing , vol.57 , pp. 49-76
    • Lee, J.A.1    Lendasse, A.2    Verleysen, M.3
  • 37
    • 0027881344 scopus 로고
    • Spatial autocorrelation: Trouble or new paradigm?
    • Legendre, P. (1993) Spatial autocorrelation: Trouble or new paradigm? Ecology, 74, 1659-1673.
    • (1993) Ecology , vol.74 , pp. 1659-1673
    • Legendre, P.1
  • 38
    • 0034126611 scopus 로고    scopus 로고
    • Regression and model-building in conservation biology, biogeography and ecology: The distinction between -and reconciliation of -'predictive'and 'explanatory'models
    • MacNally, R. (2000) Regression and model-building in conservation biology, biogeography and ecology: The distinction between -and reconciliation of -'predictive'and 'explanatory'models. Biodiversity and Conservation, 9, 655-671.
    • (2000) Biodiversity and Conservation , vol.9 , pp. 655-671
    • MacNally, R.1
  • 39
    • 34548471783 scopus 로고    scopus 로고
    • Nonlinear dimensionality reduction: Alternative ordination approaches for extracting and visualizing biodiversity patterns in tropical montane forest vegetation data
    • Mahecha, M.D., Martínez, A., Lischeid, G. & Beck, E. (2007) Nonlinear dimensionality reduction: Alternative ordination approaches for extracting and visualizing biodiversity patterns in tropical montane forest vegetation data. Ecological Informatics. 2, 138-149.
    • (2007) Ecological Informatics. , vol.2 , pp. 138-149
    • Mahecha, M.D.1    Martínez, A.2    Lischeid, G.3    Beck, E.4
  • 41
    • 0023519385 scopus 로고
    • An evaluation of the relative robustness of techniques for ecological ordination
    • Minchin, P.R. (1987) An evaluation of the relative robustness of techniques for ecological ordination. Vegetatio, 69, 89-107.
    • (1987) Vegetatio , vol.69 , pp. 89-107
    • Minchin, P.R.1
  • 43
    • 0027842269 scopus 로고
    • A numerical analysis of the distribution patterns of Salix L species in Europe
    • Myklestad, A. & Birks, H.J.B. (1993) A numerical analysis of the distribution patterns of Salix L species in Europe. Journal of Biogeography, 20, 1-32.
    • (1993) Journal of Biogeography , vol.20 , pp. 1-32
    • Myklestad, A.1    Birks, H.J.B.2
  • 44
    • 0036321801 scopus 로고    scopus 로고
    • A high-resolution data set of surface climate over global land areas
    • New, M., Lister, D., Hulme, M. & Makin, I. (2002) A high-resolution data set of surface climate over global land areas. Climate Research, 21, 1-25.
    • (2002) Climate Research , vol.21 , pp. 1-25
    • New, M.1    Lister, D.2    Hulme, M.3    Makin, I.4
  • 45
    • 33845607360 scopus 로고    scopus 로고
    • Homogenisierung und Aktualisierung des Klimadatensatzes der Climate Research Unit of East Anglia, Norwich
    • (in German)
    • Österle, H., Gerstengarbe, F.W. & Werner, P.C. (2003) Homogenisierung und Aktualisierung des Klimadatensatzes der Climate Research Unit of East Anglia, Norwich. Terra Nostra, 6, 326-329 (in German).
    • (2003) Terra Nostra , vol.6 , pp. 326-329
    • Österle, H.1    Gerstengarbe, F.W.2    Werner, P.C.3
  • 46
    • 0036779386 scopus 로고    scopus 로고
    • Illustrations and guidelines for selecting statistical methods for quantifying spatial pattern in ecological data
    • Perry, J.N., Liebhold, A.M., Rosenberg, M.S., Dungan, J., Miriti, M., Jakomulska, A. & Citron-Pousty, S. (2002) Illustrations and guidelines for selecting statistical methods for quantifying spatial pattern in ecological data. Ecography, 25, 578-600.
    • (2002) Ecography , vol.25 , pp. 578-600
    • Perry, J.N.1    Liebhold, A.M.2    Rosenberg, M.S.3    Dungan, J.4    Miriti, M.5    Jakomulska, A.6    Citron-Pousty, S.7
  • 47
    • 34347327238 scopus 로고    scopus 로고
    • Sampling design in large-scale vegetation studies: Do not sacrifice ecological thinking to statistical purism!
    • Roleèek, J., Chytrý, M., Hájek, M., Lvonèík, S. & Tichý, L. (2007) Sampling design in large-scale vegetation studies: Do not sacrifice ecological thinking to statistical purism! Folia Geobotanica, 42, 199-208.
    • (2007) Folia Geobotanica , vol.42 , pp. 199-208
    • Roleèek, J.1    Chytrý, M.2    Hájek, M.3    Lvonèík, S.4    Tichý, L.5
  • 48
    • 2342517502 scopus 로고    scopus 로고
    • Think globally, fit locally: Unsupervised learning of low dimensional manifolds
    • Saul, L.K. & Roweis, S.T. (2003) Think globally, fit locally: unsupervised learning of low dimensional manifolds. Journal of Machine Learning Research, 4, 119-155.
    • (2003) Journal of Machine Learning Research , vol.4 , pp. 119-155
    • Saul, L.K.1    Roweis, S.T.2
  • 49
    • 0141920586 scopus 로고    scopus 로고
    • Landscape patterns of indicator plants for soil acidity in the Bavarian Alps
    • Schmidtlein, S. & Ewald, J. (2003) Landscape patterns of indicator plants for soil acidity in the Bavarian Alps. Journal of Biogeography, 30, 1493-1503.
    • (2003) Journal of Biogeography , vol.30 , pp. 1493-1503
    • Schmidtlein, S.1    Ewald, J.2
  • 50
    • 3242892214 scopus 로고    scopus 로고
    • Coarse-scale substrate mapping using plant functional response types
    • Schmidtlein, S. (2004) Coarse-scale substrate mapping using plant functional response types. Erdkunde, 58, 137-155.
    • (2004) Erdkunde , vol.58 , pp. 137-155
    • Schmidtlein, S.1
  • 51
    • 34250920725 scopus 로고
    • The analysis of proximities: Multidimensional scaling with an unknown distance function. II
    • Shepard, R.N. (1962) The analysis of proximities: Multidimensional scaling with an unknown distance function. II. Psychometrika, 27, 219-246.
    • (1962) Psychometrika , vol.27 , pp. 219-246
    • Shepard, R.N.1
  • 52
    • 85156202169 scopus 로고    scopus 로고
    • Global versus local methods for nonlinear dimensionality reduction
    • (ed. by S. Becker, S. Thrunand & K. Obermayer), MIT Press, Cambridge, MA
    • de Silva, V. & Tenenbaum, J.B. (2002) Global versus local methods for nonlinear dimensionality reduction. Advances in neural information processing systems (ed. by S. Becker, S. Thrunand & K. Obermayer), pp. 705-712. MIT Press, Cambridge, MA.
    • (2002) Advances in Neural Information Processing Systems , pp. 705-712
    • de Silva, V.1    Tenenbaum, J.B.2
  • 53
    • 84898986732 scopus 로고    scopus 로고
    • Mapping a manifold of perceptual observations
    • (ed. by M. Jordan, M. Kearnsand & S. Solla), MIT Press, Cambridge, MA
    • Tenenbaum, J.B. (1998) Mapping a manifold of perceptual observations. Advances in neural information processing systems (ed. by M. Jordan, M. Kearnsand & S. Solla), pp. 682-687. MIT Press, Cambridge, MA.
    • (1998) Advances in Neural Information Processing Systems , pp. 682-687
    • Tenenbaum, J.B.1
  • 54
    • 0034704229 scopus 로고    scopus 로고
    • A global geometric framework for nonlinear dimensionality reduction
    • Tenenbaum, J.B., de Silva, V. & Langford, J.C. (2000) A global geometric framework for nonlinear dimensionality reduction. Science, 290, 2319-2323.
    • (2000) Science , vol.290 , pp. 2319-2323
    • Tenenbaum, J.B.1    de Silva, V.2    Langford, J.C.3
  • 55
    • 23644449120 scopus 로고    scopus 로고
    • Spatial analysis of landscapes: Concepts and statistics
    • Wagner, H.H. & Fortin, M.J. (2005) Spatial analysis of landscapes: concepts and statistics. Ecology, 86, 1975-1987.
    • (2005) Ecology , vol.86 , pp. 1975-1987
    • Wagner, H.H.1    Fortin, M.J.2
  • 56
    • 0842328874 scopus 로고    scopus 로고
    • Stormwater drainage pipes as a threat to a stream-dwelling amphipod of conservation significance, Austrogammarus australis, in southeastern Australia
    • Walsh, C.J., Papas, P.J., Crowther, D., Sim, P.T. & Yoo, J. (2004) Stormwater drainage pipes as a threat to a stream-dwelling amphipod of conservation significance, Austrogammarus australis, in southeastern Australia. Biodiversity and Conservation, 13, 781-793.
    • (2004) Biodiversity and Conservation , vol.13 , pp. 781-793
    • Walsh, C.J.1    Papas, P.J.2    Crowther, D.3    Sim, P.T.4    Yoo, J.5
  • 57
    • 33845699690 scopus 로고    scopus 로고
    • Geographical gradients of species richness: A test of the water-energy conjecture of Hawkins et al. (2003) using European data for five taxa
    • Whittaker, R.J., Nogués-Bravo, D. & Araújo, M.B. (2007) Geographical gradients of species richness: A test of the water-energy conjecture of Hawkins et al. (2003) using European data for five taxa. Global Ecology and Biogeography, 16, 76-89.
    • (2007) Global Ecology and Biogeography , vol.16 , pp. 76-89
    • Whittaker, R.J.1    Nogués-Bravo, D.2    Araújo, M.B.3
  • 58
    • 0000897150 scopus 로고
    • The ordination of incidence data
    • Williamson, M.H. (1978) The ordination of incidence data. Journal of Ecology, 66, 911-920.
    • (1978) Journal of Ecology , vol.66 , pp. 911-920
    • Williamson, M.H.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.