-
1
-
-
33747463656
-
The unfolded state of NTL9 is compact in the absence of denaturant
-
Anil, B., Li, Y., Cho, J.H., and Raleigh, D.P. 2006. The unfolded state of NTL9 is compact in the absence of denaturant. Biochemistry 45: 10110-10116.
-
(2006)
Biochemistry
, vol.45
, pp. 10110-10116
-
-
Anil, B.1
Li, Y.2
Cho, J.H.3
Raleigh, D.P.4
-
2
-
-
0028305457
-
Prediction of pH-dependent properties of proteins
-
Antosiewicz, J., McCammon, J.A., and Gilson, M.K. 1994. Prediction of pH-dependent properties of proteins. J. Mol. Biol. 238: 415-436.
-
(1994)
J. Mol. Biol
, vol.238
, pp. 415-436
-
-
Antosiewicz, J.1
McCammon, J.A.2
Gilson, M.K.3
-
3
-
-
0025197061
-
pKa's of ionizable groups in proteins: Atomic detail from a continuum electrostatic model
-
Bashford, D. and Karplus, M. 1990. pKa's of ionizable groups in proteins: Atomic detail from a continuum electrostatic model. Biochemistry 29: 10219-10225.
-
(1990)
Biochemistry
, vol.29
, pp. 10219-10225
-
-
Bashford, D.1
Karplus, M.2
-
4
-
-
33751499830
-
Multiple-site titration curves of proteins: An analysis of exact and approximate methods for their calculation
-
Bashford, D. and Karplus, M. 1991. Multiple-site titration curves of proteins: An analysis of exact and approximate methods for their calculation. J. Phys. Chem. 95: 9556-9561.
-
(1991)
J. Phys. Chem
, vol.95
, pp. 9556-9561
-
-
Bashford, D.1
Karplus, M.2
-
5
-
-
0032570873
-
Forcing thermodynamically unfolded proteins to fold
-
Baskakov, I. and Bolen, D.W. 1998. Forcing thermodynamically unfolded proteins to fold. J. Biol. Chem. 273: 4831-4834.
-
(1998)
J. Biol. Chem
, vol.273
, pp. 4831-4834
-
-
Baskakov, I.1
Bolen, D.W.2
-
6
-
-
0042511005
-
A graph-theory algorithm for rapid protein side-chain prediction
-
Canutescu, A.A., Shelenkov, A.A., and Dunbrack Jr., R.L. 2003. A graph-theory algorithm for rapid protein side-chain prediction. Protein Sci. 12: 2001-2014.
-
(2003)
Protein Sci
, vol.12
, pp. 2001-2014
-
-
Canutescu, A.A.1
Shelenkov, A.A.2
Dunbrack Jr., R.L.3
-
7
-
-
33746377894
-
Protein misfolding, functional amyloid, and human disease
-
Chiti, F. and Dobson, C.M. 2006. Protein misfolding, functional amyloid, and human disease. Annu. Rev. Biochem. 75: 333-366.
-
(2006)
Annu. Rev. Biochem
, vol.75
, pp. 333-366
-
-
Chiti, F.1
Dobson, C.M.2
-
8
-
-
25144470141
-
Mutational analysis demonstrates that specific electrostatic interactions can play a key role in the denatured state ensemble of proteins
-
Cho, J.H. and Raleigh, D.P. 2005. Mutational analysis demonstrates that specific electrostatic interactions can play a key role in the denatured state ensemble of proteins. J. Mol. Biol. 353: 174-185.
-
(2005)
J. Mol. Biol
, vol.353
, pp. 174-185
-
-
Cho, J.H.1
Raleigh, D.P.2
-
9
-
-
1942521649
-
Thermodynamics and kinetics of non-native interactions in protein folding: A single-point mutant significantly stabilizes the N-terminal domain of L9 by modulating nonnative interactions in the denatured state
-
Cho, J.H., Sato, S., and Raleigh, D.P. 2004. Thermodynamics and kinetics of non-native interactions in protein folding: A single-point mutant significantly stabilizes the N-terminal domain of L9 by modulating nonnative interactions in the denatured state. J. Mol. Biol. 338: 827-837.
-
(2004)
J. Mol. Biol
, vol.338
, pp. 827-837
-
-
Cho, J.H.1
Sato, S.2
Raleigh, D.P.3
-
10
-
-
0022423920
-
Theory for the folding and stability of globular proteins
-
Dill, K.A. 1985. Theory for the folding and stability of globular proteins. Biochemistry 24: 1501-1509.
-
(1985)
Biochemistry
, vol.24
, pp. 1501-1509
-
-
Dill, K.A.1
-
11
-
-
0035022941
-
Intrinsically disordered protein
-
Dunker, A.K., Lawson, J.D., Brown, C.J., Williams, R.M., Romero, P., Oh, J.S., Oldfield, C.J., Campen, A.M., Ratliff, C.M., Hipps, K.W., et al. 2001. Intrinsically disordered protein. J. Mol. Graph. Model. 19: 26-59.
-
(2001)
J. Mol. Graph. Model
, vol.19
, pp. 26-59
-
-
Dunker, A.K.1
Lawson, J.D.2
Brown, C.J.3
Williams, R.M.4
Romero, P.5
Oh, J.S.6
Oldfield, C.J.7
Campen, A.M.8
Ratliff, C.M.9
Hipps, K.W.10
-
12
-
-
0033850087
-
High apparent dielectric constants in the interior of a protein reflect water penetration
-
Dwyer, J.J., Gittis, A.G., Karp, D.A., Lattman, E.E., Spencer, D.S., Stites, W.E., and García-Moreno E., B. 2000. High apparent dielectric constants in the interior of a protein reflect water penetration. Biophys. J. 79: 1610-1620.
-
(2000)
Biophys. J
, vol.79
, pp. 1610-1620
-
-
Dwyer, J.J.1
Gittis, A.G.2
Karp, D.A.3
Lattman, E.E.4
Spencer, D.S.5
Stites, W.E.6
García-Moreno, E.B.7
-
13
-
-
0033544710
-
Realistic modeling of the denatured states of proteins allows accurate calculations of the pH dependence of protein stability
-
Elcock, A.H. 1999. Realistic modeling of the denatured states of proteins allows accurate calculations of the pH dependence of protein stability. J. Mol. Biol. 294: 1051-1062.
-
(1999)
J. Mol. Biol
, vol.294
, pp. 1051-1062
-
-
Elcock, A.H.1
-
14
-
-
0036099192
-
Experimental pK(a) values of buried residues: Analysis with continuum methods and role of water penetration
-
Fitch, C.A., Karp, D.A., Lee, K.K., Stites, W.E., Lattman, E.E., and García-Moreno, E.B. 2002. Experimental pK(a) values of buried residues: Analysis with continuum methods and role of water penetration. Biophys. J. 82: 3289-3304.
-
(2002)
Biophys. J
, vol.82
, pp. 3289-3304
-
-
Fitch, C.A.1
Karp, D.A.2
Lee, K.K.3
Stites, W.E.4
Lattman, E.E.5
García-Moreno, E.B.6
-
15
-
-
33645034410
-
Molecular mechanisms of pH-driven conformational transitions of proteins: Insights from continuum electrostatics calculations of acid unfolding
-
Fitch, C.A., Whitten, S.T., Hilser, V.J., and García-Moreno, E.B. 2006. Molecular mechanisms of pH-driven conformational transitions of proteins: Insights from continuum electrostatics calculations of acid unfolding. Proteins 63: 113-126.
-
(2006)
Proteins
, vol.63
, pp. 113-126
-
-
Fitch, C.A.1
Whitten, S.T.2
Hilser, V.J.3
García-Moreno, E.B.4
-
16
-
-
4344704080
-
Reassessing random-coil statistics in unfolded proteins
-
Fitzkee, N.C. and Rose, G.D. 2004. Reassessing random-coil statistics in unfolded proteins. Proc. Natl. Acad. Sci. 101: 12497-12502.
-
(2004)
Proc. Natl. Acad. Sci
, vol.101
, pp. 12497-12502
-
-
Fitzkee, N.C.1
Rose, G.D.2
-
17
-
-
26844480393
-
Sterics and solvation winnow accessible conformational space for unfolded proteins
-
Fitzkee, N.C. and Rose, G.D. 2005. Sterics and solvation winnow accessible conformational space for unfolded proteins. J. Mol. Biol. 353: 873-887.
-
(2005)
J. Mol. Biol
, vol.353
, pp. 873-887
-
-
Fitzkee, N.C.1
Rose, G.D.2
-
18
-
-
22244449669
-
Do all backbone polar groups in proteins form hydrogen bonds?
-
Fleming, P.J. and Rose, G.D. 2005. Do all backbone polar groups in proteins form hydrogen bonds? Protein Sci. 14: 1911-1917.
-
(2005)
Protein Sci
, vol.14
, pp. 1911-1917
-
-
Fleming, P.J.1
Rose, G.D.2
-
19
-
-
11144230087
-
A novel method reveals that solvent water favors polyproline II over β-strand conformation in peptides and unfolded proteins: Conditional hydrophobic accessible surface area (CHASA)
-
Fleming, P.J., Fitzkee, N.C., Mezei, M., Srinivasan, R., and Rose, G.D. 2005. A novel method reveals that solvent water favors polyproline II over β-strand conformation in peptides and unfolded proteins: Conditional hydrophobic accessible surface area (CHASA). Protein Sci. 14: 111-118.
-
(2005)
Protein Sci
, vol.14
, pp. 111-118
-
-
Fleming, P.J.1
Fitzkee, N.C.2
Mezei, M.3
Srinivasan, R.4
Rose, G.D.5
-
21
-
-
0040321024
-
Experimental measurement of the effective dielectric in the hydrophobic core of a protein
-
García-Moreno E., B., Dwyer, J.J., Gittis, A.G., Lattman, E.E., Spencer, D.S., and Stites, W.E. 1997. Experimental measurement of the effective dielectric in the hydrophobic core of a protein. Biophys. Chem. 64: 211-224.
-
(1997)
Biophys. Chem
, vol.64
, pp. 211-224
-
-
García-Moreno, E.B.1
Dwyer, J.J.2
Gittis, A.G.3
Lattman, E.E.4
Spencer, D.S.5
Stites, W.E.6
-
22
-
-
0031585992
-
Characterization of long-range structure in the denatured state of staphylococcal nuclease. II. Distance restraints from paramagnetic relaxation and calculation of an ensemble of structures
-
Gillespie, J.R. and Shortle, D. 1997. Characterization of long-range structure in the denatured state of staphylococcal nuclease. II. Distance restraints from paramagnetic relaxation and calculation of an ensemble of structures. J. Mol. Biol. 268: 170-184.
-
(1997)
J. Mol. Biol
, vol.268
, pp. 170-184
-
-
Gillespie, J.R.1
Shortle, D.2
-
23
-
-
0027477251
-
Multiple-site titration and molecular modeling: Two rapid methods for computing energies and forces for ionizable groups in proteins
-
Gilson, M.K. 1993. Multiple-site titration and molecular modeling: Two rapid methods for computing energies and forces for ionizable groups in proteins. Proteins 15: 266-282.
-
(1993)
Proteins
, vol.15
, pp. 266-282
-
-
Gilson, M.K.1
-
24
-
-
0025026407
-
Phase diagram for acidic conformational states of apomyoglobin
-
Goto, Y. and Fink, A.L. 1990. Phase diagram for acidic conformational states of apomyoglobin. J. Mol. Biol. 214: 803-805.
-
(1990)
J. Mol. Biol
, vol.214
, pp. 803-805
-
-
Goto, Y.1
Fink, A.L.2
-
25
-
-
0025101548
-
Acid-induced folding of proteins
-
Goto, Y., Calciano, L.J., and Fink, A.L. 1990. Acid-induced folding of proteins. Proc. Natl. Acad. Sci. 87: 573-577.
-
(1990)
Proc. Natl. Acad. Sci
, vol.87
, pp. 573-577
-
-
Goto, Y.1
Calciano, L.J.2
Fink, A.L.3
-
26
-
-
0025877987
-
The crystal structure of staphylococcal nuclease refined at 1.7 Å resolution
-
Hynes, T.R. and Fox, R.O. 1991. The crystal structure of staphylococcal nuclease refined at 1.7 Å resolution. Proteins 10: 92-105.
-
(1991)
Proteins
, vol.10
, pp. 92-105
-
-
Hynes, T.R.1
Fox, R.O.2
-
27
-
-
24944542708
-
Statistical coil model of the unfolded state: Resolving the reconciliation problem
-
Jha, A.K., Colubri, A., Freed, K.F., and Sosnick, T.R. 2005. Statistical coil model of the unfolded state: Resolving the reconciliation problem. Proc. Natl. Acad. Sci. 102: 13099-13104.
-
(2005)
Proc. Natl. Acad. Sci
, vol.102
, pp. 13099-13104
-
-
Jha, A.K.1
Colubri, A.2
Freed, K.F.3
Sosnick, T.R.4
-
28
-
-
4344716256
-
Random-coil behavior and the dimensions of chemically unfolded proteins
-
Kohn, J.E., Millett, I.S., Jacob, J., Zagrovic, B., Dillon, T.M., Cingel, N., Dothager, R.S., Seifert, S., Thiyagarajan, P., Sosnick, T.R., et al. 2004. Random-coil behavior and the dimensions of chemically unfolded proteins. Proc. Natl. Acad. Sci. 101: 12491-12496.
-
(2004)
Proc. Natl. Acad. Sci
, vol.101
, pp. 12491-12496
-
-
Kohn, J.E.1
Millett, I.S.2
Jacob, J.3
Zagrovic, B.4
Dillon, T.M.5
Cingel, N.6
Dothager, R.S.7
Seifert, S.8
Thiyagarajan, P.9
Sosnick, T.R.10
-
29
-
-
0026244229
-
Molscript: A program to produce both detailed and schematic plots of protein structures
-
Kraulis, P.J. 1991. Molscript: A program to produce both detailed and schematic plots of protein structures. J. Appl. Crystallogr. 24: 946-950.
-
(1991)
J. Appl. Crystallogr
, vol.24
, pp. 946-950
-
-
Kraulis, P.J.1
-
30
-
-
0033551039
-
pKa values and the pH dependent stability of the N-terminal domain of L9 as probes of electrostatic interactions in the denatured state. Differentiation between local and nonlocal interactions
-
Kuhlman, B., Luisi, D.L., Young, P., and Raleigh, D.P. 1999. pKa values and the pH dependent stability of the N-terminal domain of L9 as probes of electrostatic interactions in the denatured state. Differentiation between local and nonlocal interactions. Biochemistry 38: 4896-4903.
-
(1999)
Biochemistry
, vol.38
, pp. 4896-4903
-
-
Kuhlman, B.1
Luisi, D.L.2
Young, P.3
Raleigh, D.P.4
-
31
-
-
41349115238
-
Model for calculation of electrostatic interactions in unfolded proteins
-
doi: 10.1103/PhysRevE.65.011901
-
Kundrotas, P.J. and Karshikoff, A. 2002. Model for calculation of electrostatic interactions in unfolded proteins. Phys. Rev. E Stat. Nonlin. Soft Matter Phys. 65: 011901. doi: 10.1103/PhysRevE.65.011901.
-
(2002)
Phys. Rev. E Stat. Nonlin. Soft Matter Phys
, vol.65
, pp. 011901
-
-
Kundrotas, P.J.1
Karshikoff, A.2
-
32
-
-
4644306055
-
Charge sequence coding in statistical modeling of unfolded proteins
-
Kundrotas, P.J. and Karshikoff, A. 2004. Charge sequence coding in statistical modeling of unfolded proteins. Biochim. Biophys. Acta 1702: 1-8.
-
(2004)
Biochim. Biophys. Acta
, vol.1702
, pp. 1-8
-
-
Kundrotas, P.J.1
Karshikoff, A.2
-
33
-
-
38649118611
-
Ionization equilibria and electrostatic effects in native and denatured staphylococcal nuclease
-
The Johns Hopkins University, Baltimore, MD
-
Lee, K.K. 2001. Ionization equilibria and electrostatic effects in native and denatured staphylococcal nuclease. In T.C. Jenkins Department of Biophysics. The Johns Hopkins University, Baltimore, MD.
-
(2001)
T.C. Jenkins Department of Biophysics
-
-
Lee, K.K.1
-
34
-
-
0015222647
-
The interpretation of protein structures: Estimation of static accessibility
-
Lee, B. and Richards, F.M. 1971. The interpretation of protein structures: Estimation of static accessibility. J. Mol. Biol. 55: 379-400.
-
(1971)
J. Mol. Biol
, vol.55
, pp. 379-400
-
-
Lee, B.1
Richards, F.M.2
-
35
-
-
0036228118
-
Distance dependence and salt sensitivity of pairwise, coulombic interactions in a protein
-
Lee, K.K., Fitch, C.A., and García-Moreno, E.B. 2002. Distance dependence and salt sensitivity of pairwise, coulombic interactions in a protein. Protein Sci. 11: 1004-1016.
-
(2002)
Protein Sci
, vol.11
, pp. 1004-1016
-
-
Lee, K.K.1
Fitch, C.A.2
García-Moreno, E.B.3
-
37
-
-
0034663722
-
The penultimate rotamer library
-
Lovell, S.C., Word, J.M., Richardson, J.S., and Richardson, D.C. 2000. The penultimate rotamer library. Proteins 40: 389-408.
-
(2000)
Proteins
, vol.40
, pp. 389-408
-
-
Lovell, S.C.1
Word, J.M.2
Richardson, J.S.3
Richardson, D.C.4
-
38
-
-
0021782348
-
pH-dependent processes in proteins
-
Matthew, J.B., Gurd, F.R., García-Moreno, E.B., Flanagan, M.A., March, K.L., and Shire, S.J. 1985. pH-dependent processes in proteins. CRC Crit. Rev. Biochem. 18: 91-197.
-
(1985)
CRC Crit. Rev. Biochem
, vol.18
, pp. 91-197
-
-
Matthew, J.B.1
Gurd, F.R.2
García-Moreno, E.B.3
Flanagan, M.A.4
March, K.L.5
Shire, S.J.6
-
39
-
-
0029967068
-
Contributions of the ionizable amino acids to the stability of staphylococcal nuclease
-
Meeker, A.K., García-Moreno E., B., and Shortle, D. 1996. Contributions of the ionizable amino acids to the stability of staphylococcal nuclease. Biochemistry 35: 6443-6449.
-
(1996)
Biochemistry
, vol.35
, pp. 6443-6449
-
-
Meeker, A.K.1
García-Moreno, E.B.2
Shortle, D.3
-
40
-
-
0030815133
-
Raster3D: Photorealistic molecular graphics
-
Merritt, E.A. and Bacon, D.J. 1997. Raster3D: Photorealistic molecular graphics. Macromol. Crystallogr. B 277: 505-524.
-
(1997)
Macromol. Crystallogr. B
, vol.277
, pp. 505-524
-
-
Merritt, E.A.1
Bacon, D.J.2
-
41
-
-
0014203395
-
Proteins as random coils. II. Hydrogen ion titration curve of ribonuclease in 6 M guanidine hydrochloride
-
Nozaki, Y. and Tanford, C. 1967. Proteins as random coils. II. Hydrogen ion titration curve of ribonuclease in 6 M guanidine hydrochloride. J. Am. Chem. Soc. 89: 742-749.
-
(1967)
J. Am. Chem. Soc
, vol.89
, pp. 742-749
-
-
Nozaki, Y.1
Tanford, C.2
-
42
-
-
0021114569
-
Molten-globule state: A compact form of globular proteins with mobile side-chains
-
Ohgushi, M. and Wada, A. 1983. Molten-globule state: A compact form of globular proteins with mobile side-chains. FEBS Lett. 164: 21-24.
-
(1983)
FEBS Lett
, vol.164
, pp. 21-24
-
-
Ohgushi, M.1
Wada, A.2
-
43
-
-
0028983182
-
pKa values of carboxyl groups in the native and denatured states of barnase: The pKa values of the denatured state are on average 0.4 units lower than those of model compounds
-
Oliveberg, M., Arcus, V.L., and Fersht, A.R. 1995. pKa values of carboxyl groups in the native and denatured states of barnase: The pKa values of the denatured state are on average 0.4 units lower than those of model compounds. Biochemistry 34: 9424-9433.
-
(1995)
Biochemistry
, vol.34
, pp. 9424-9433
-
-
Oliveberg, M.1
Arcus, V.L.2
Fersht, A.R.3
-
44
-
-
0033852796
-
Charge-charge interactions influence the denatured state ensemble and contribute to protein stability
-
Pace, C.N., Alston, R.W., and Shaw, K.L. 2000. Charge-charge interactions influence the denatured state ensemble and contribute to protein stability. Protein Sci. 9: 1395-1398.
-
(2000)
Protein Sci
, vol.9
, pp. 1395-1398
-
-
Pace, C.N.1
Alston, R.W.2
Shaw, K.L.3
-
45
-
-
0033730431
-
The Flory isolated-pair hypothesis is not valid for polypeptide chains: Implications for protein folding
-
Pappu, R.V., Srinivasan, R., and Rose, G.D. 2000. The Flory isolated-pair hypothesis is not valid for polypeptide chains: Implications for protein folding. Proc. Natl. Acad. Sci. 97: 12565-12570.
-
(2000)
Proc. Natl. Acad. Sci
, vol.97
, pp. 12565-12570
-
-
Pappu, R.V.1
Srinivasan, R.2
Rose, G.D.3
-
46
-
-
27744450628
-
pH dependence of amide chemical shifts in natively disordered polypeptides detects medium-range interactions with ionizable residues
-
Pujato, M., Bracken, C., Mancusso, R., Cataldi, M., and Tasayco, M.L. 2005. pH dependence of amide chemical shifts in natively disordered polypeptides detects medium-range interactions with ionizable residues. Biophys. J. 89: 3293-3302.
-
(2005)
Biophys. J
, vol.89
, pp. 3293-3302
-
-
Pujato, M.1
Bracken, C.2
Mancusso, R.3
Cataldi, M.4
Tasayco, M.L.5
-
47
-
-
0015247070
-
Hydrogen ion titration curve of lysozyme in 6 M guanidine hydrochloride
-
Roxby, R. and Tanford, C. 1971. Hydrogen ion titration curve of lysozyme in 6 M guanidine hydrochloride. Biochemistry 10: 3348-3352.
-
(1971)
Biochemistry
, vol.10
, pp. 3348-3352
-
-
Roxby, R.1
Tanford, C.2
-
48
-
-
0016699207
-
Macromolecular binding
-
Schellman, J.A. 1975. Macromolecular binding. Biopolymers 14: 999-1018.
-
(1975)
Biopolymers
, vol.14
, pp. 999-1018
-
-
Schellman, J.A.1
-
49
-
-
0037047134
-
Polyproline II structure in a sequence of seven alanine residues
-
Shi, Z., Olson, C.A., Rose, G.D., Baldwin, R.L., and Kallenbach, N.R. 2002. Polyproline II structure in a sequence of seven alanine residues. Proc. Natl. Acad. Sci. 99: 9190-9195.
-
(2002)
Proc. Natl. Acad. Sci
, vol.99
, pp. 9190-9195
-
-
Shi, Z.1
Olson, C.A.2
Rose, G.D.3
Baldwin, R.L.4
Kallenbach, N.R.5
-
50
-
-
0035919635
-
Persistence of native-like topology in a denatured protein in 8 M urea
-
Shortle, D. and Ackerman, M.S. 2001. Persistence of native-like topology in a denatured protein in 8 M urea. Science 293: 487-489.
-
(2001)
Science
, vol.293
, pp. 487-489
-
-
Shortle, D.1
Ackerman, M.S.2
-
51
-
-
1642505606
-
Ab initio protein folding using LINUS
-
Srinivasan, R., Fleming, P.J., and Rose, G.D. 2004. Ab initio protein folding using LINUS. Methods Enzymol. 383: 48-66.
-
(2004)
Methods Enzymol
, vol.383
, pp. 48-66
-
-
Srinivasan, R.1
Fleming, P.J.2
Rose, G.D.3
-
52
-
-
0028904906
-
Hydrogen bonds and the pH dependence of ovomucoid third domain stability
-
Swint-Kruse, L. and Robertson, A.D. 1995. Hydrogen bonds and the pH dependence of ovomucoid third domain stability. Biochemistry 34: 4724-4732.
-
(1995)
Biochemistry
, vol.34
, pp. 4724-4732
-
-
Swint-Kruse, L.1
Robertson, A.D.2
-
53
-
-
0029416954
-
Perturbed pKa-values in the denatured states of proteins
-
Tan, Y.J., Oliveberg, M., Davis, B., and Fersht, A.R. 1995. Perturbed pKa-values in the denatured states of proteins. J. Mol. Biol. 254: 980-992.
-
(1995)
J. Mol. Biol
, vol.254
, pp. 980-992
-
-
Tan, Y.J.1
Oliveberg, M.2
Davis, B.3
Fersht, A.R.4
-
54
-
-
0014364651
-
Protein denaturation
-
Tanford, C. 1968. Protein denaturation. Adv. Protein Chem. 23: 121-282.
-
(1968)
Adv. Protein Chem
, vol.23
, pp. 121-282
-
-
Tanford, C.1
-
55
-
-
0014718113
-
Protein denaturation. C. Theoretical models for the mechanism of denaturation
-
Tanford, C. 1970. Protein denaturation. C. Theoretical models for the mechanism of denaturation. Adv. Protein Chem. 24: 1-95.
-
(1970)
Adv. Protein Chem
, vol.24
, pp. 1-95
-
-
Tanford, C.1
-
56
-
-
0015520587
-
Interpretation of protein titration curves. Application to lysozyme
-
Tanford, C. and Roxby, R. 1972. Interpretation of protein titration curves. Application to lysozyme. Biochemistry 11: 2192-2198.
-
(1972)
Biochemistry
, vol.11
, pp. 2192-2198
-
-
Tanford, C.1
Roxby, R.2
-
57
-
-
33646145955
-
pK values of the ionizable groups of proteins
-
Thurlkill, R.L., Grimsley, G.R., Scholtz, J.M., and Pace, C.N. 2006. pK values of the ionizable groups of proteins. Protein Sci. 15: 1214-1218.
-
(2006)
Protein Sci
, vol.15
, pp. 1214-1218
-
-
Thurlkill, R.L.1
Grimsley, G.R.2
Scholtz, J.M.3
Pace, C.N.4
-
58
-
-
0037157124
-
Measurement of side-chain carboxyl pK(a) values of glutamate and aspartate residues in an unfolded protein by multinuclear NMR spectroscopy
-
Tollinger, M., Forman-Kay, J.D., and Kay, L.E. 2002. Measurement of side-chain carboxyl pK(a) values of glutamate and aspartate residues in an unfolded protein by multinuclear NMR spectroscopy. J. Am. Chem. Soc. 124: 5714-5717.
-
(2002)
J. Am. Chem. Soc
, vol.124
, pp. 5714-5717
-
-
Tollinger, M.1
Forman-Kay, J.D.2
Kay, L.E.3
-
59
-
-
0037446852
-
Site-specific contributions to the pH dependence of protein stability
-
Tollinger, M., Crowhurst, K.A., Kay, L.E., and Forman-Kay, J.D. 2003. Site-specific contributions to the pH dependence of protein stability. Proc. Natl. Acad. Sci. 100: 4545-4550.
-
(2003)
Proc. Natl. Acad. Sci
, vol.100
, pp. 4545-4550
-
-
Tollinger, M.1
Crowhurst, K.A.2
Kay, L.E.3
Forman-Kay, J.D.4
-
60
-
-
33748454896
-
Toward an accurate theoretical framework for describing ensembles for proteins under strongly denaturing conditions
-
Tran, H.T. and Pappu, R.V. 2006. Toward an accurate theoretical framework for describing ensembles for proteins under strongly denaturing conditions. Biophys. J. 91: 1868-1886.
-
(2006)
Biophys. J
, vol.91
, pp. 1868-1886
-
-
Tran, H.T.1
Pappu, R.V.2
-
61
-
-
23944453852
-
Reconciling observations of sequence-specific conformational propensities with the generic polymeric behavior of denatured proteins
-
Tran, H.T., Wang, X., and Pappu, R.V. 2005. Reconciling observations of sequence-specific conformational propensities with the generic polymeric behavior of denatured proteins. Biochemistry 44: 11369-11380.
-
(2005)
Biochemistry
, vol.44
, pp. 11369-11380
-
-
Tran, H.T.1
Wang, X.2
Pappu, R.V.3
-
62
-
-
0034700307
-
pH dependence of stability of staphylococcal nuclease: Evidence of substantial electrostatic interactions in the denatured state
-
Whitten, S.T. and García-Moreno E., B. 2000. pH dependence of stability of staphylococcal nuclease: Evidence of substantial electrostatic interactions in the denatured state. Biochemistry 39: 14292-14304.
-
(2000)
Biochemistry
, vol.39
, pp. 14292-14304
-
-
Whitten, S.T.1
García-Moreno, E.B.2
-
63
-
-
0035933338
-
The origin of pH-dependent changes in m-values for the denaturant-induced unfolding of proteins
-
Whitten, S.T., Wooll, J.O., Razeghifard, R., García-Moreno E., B., and Hilser, V.J. 2001. The origin of pH-dependent changes in m-values for the denaturant-induced unfolding of proteins. J. Mol. Biol. 309: 1165-1175.
-
(2001)
J. Mol. Biol
, vol.309
, pp. 1165-1175
-
-
Whitten, S.T.1
Wooll, J.O.2
Razeghifard, R.3
García-Moreno, E.B.4
Hilser, V.J.5
-
64
-
-
67650040559
-
Linked functions and reciprocal effects in hemoglobin: A second look
-
Wyman Jr., J. 1964. Linked functions and reciprocal effects in hemoglobin: A second look. Adv. Protein Chem. 19: 223-286.
-
(1964)
Adv. Protein Chem
, vol.19
, pp. 223-286
-
-
Wyman Jr., J.1
-
65
-
-
0027563464
-
On the calculation of pKas in proteins
-
Yang, A.S., Gunner, M.R., Sampogna, R., Sharp, K., and Honig, B. 1993. On the calculation of pKas in proteins. Proteins 15: 252-265.
-
(1993)
Proteins
, vol.15
, pp. 252-265
-
-
Yang, A.S.1
Gunner, M.R.2
Sampogna, R.3
Sharp, K.4
Honig, B.5
-
66
-
-
0037133605
-
A Gaussian-chain model for treating residual charge-charge interactions in the unfolded state of proteins
-
Zhou, H.X. 2002a. A Gaussian-chain model for treating residual charge-charge interactions in the unfolded state of proteins. Proc. Natl. Acad. Sci. 99: 3569-3574.
-
(2002)
Proc. Natl. Acad. Sci
, vol.99
, pp. 3569-3574
-
-
Zhou, H.X.1
-
67
-
-
0036927473
-
Residual charge interactions in unfolded staphylococcal nuclease can be explained by the Gaussian-chain model
-
Zhou, H.X. 2002b. Residual charge interactions in unfolded staphylococcal nuclease can be explained by the Gaussian-chain model. Biophys. J. 83: 2981-2986.
-
(2002)
Biophys. J
, vol.83
, pp. 2981-2986
-
-
Zhou, H.X.1
-
68
-
-
0037467111
-
Direct test of the Gaussian-chain model for treating residual charge-charge interactions in the unfolded state of proteins
-
Zhou, H.X. 2003. Direct test of the Gaussian-chain model for treating residual charge-charge interactions in the unfolded state of proteins. J. Am. Chem. Soc. 125: 2060-2061.
-
(2003)
J. Am. Chem. Soc
, vol.125
, pp. 2060-2061
-
-
Zhou, H.X.1
|