-
1
-
-
34250785284
-
Genetic properties influencing the evolvability of gene expression
-
Landry, C.R., Lemos, B., Rifkin, S.A., Dickinson, W.J. & Hartl, D.L. Genetic properties influencing the evolvability of gene expression. Science 317, 118-121 (2007).
-
(2007)
Science
, vol.317
, pp. 118-121
-
-
Landry, C.R.1
Lemos, B.2
Rifkin, S.A.3
Dickinson, W.J.4
Hartl, D.L.5
-
2
-
-
0037177625
-
Genetic dissection of transcriptional regulation in budding yeast
-
Brem, R.B., Yvert, G., Clinton, R. & Kruglyak, L. Genetic dissection of transcriptional regulation in budding yeast. Science 296, 752-755 (2002).
-
(2002)
Science
, vol.296
, pp. 752-755
-
-
Brem, R.B.1
Yvert, G.2
Clinton, R.3
Kruglyak, L.4
-
3
-
-
13444306165
-
The landscape of genetic complexity across 5,700 gene expression traits in yeast
-
Brem, R.B. & Kruglyak, L. The landscape of genetic complexity across 5,700 gene expression traits in yeast. Proc. Natl. Acad. Sci. USA 102, 1572-1577 (2005).
-
(2005)
Proc. Natl. Acad. Sci. USA
, vol.102
, pp. 1572-1577
-
-
Brem, R.B.1
Kruglyak, L.2
-
4
-
-
33745583768
-
A genetic signature of interspecies variations in gene expression
-
Tirosh, I., Weinberger, A., Carmi, M. & Barkai, N. A genetic signature of interspecies variations in gene expression. Nat. Genet. 38, 830-834 (2006)
-
(2006)
Nat. Genet
, vol.38
, pp. 830-834
-
-
Tirosh, I.1
Weinberger, A.2
Carmi, M.3
Barkai, N.4
-
5
-
-
34249006235
-
Chromatin structure and evolution in the human genome
-
Prendergast, J.G. et al. Chromatin structure and evolution in the human genome. BMC Evol. Biol. 7, 72 (2007).
-
(2007)
BMC Evol. Biol
, vol.7
, pp. 72
-
-
Prendergast, J.G.1
-
6
-
-
33847357312
-
A genome-wide analysis in Saccharomyces cerevisiae demonstrates the influence of chromatin modifiers on transcription
-
Steinfeld, I., Shamir, R. & Kupiec, M. A genome-wide analysis in Saccharomyces cerevisiae demonstrates the influence of chromatin modifiers on transcription. Nat. Genet. 39, 303-309 (2007).
-
(2007)
Nat. Genet
, vol.39
, pp. 303-309
-
-
Steinfeld, I.1
Shamir, R.2
Kupiec, M.3
-
7
-
-
0000634854
-
Use of the Kolmogorov-Smirnov, Cramer-von Mises and related statistics without extensive tables
-
Stephens, M.A. Use of the Kolmogorov-Smirnov, Cramer-von Mises and related statistics without extensive tables. J. R. Stat. Soc. (B) 32, 115-122 (1970).
-
(1970)
J. R. Stat. Soc. (B)
, vol.32
, pp. 115-122
-
-
Stephens, M.A.1
-
8
-
-
33749037129
-
Identifying regulatory mechanisms using individual variation reveals key role for chromatin modification
-
Lee, S-I., Pe'er, D., Dudley, A.M., Church, G.M. & Koller, D. Identifying regulatory mechanisms using individual variation reveals key role for chromatin modification. Proc. Natl. Acad. Sci. USA 103, 14062-14067 (2006).
-
(2006)
Proc. Natl. Acad. Sci. USA
, vol.103
, pp. 14062-14067
-
-
Lee, S.-I.1
Pe'er, D.2
Dudley, A.M.3
Church, G.M.4
Koller, D.5
-
9
-
-
0042856391
-
Trans-acting regulatory variation in Saccharomyces cerevisiae and the role of transcription factors
-
Yvert, G. et al. Trans-acting regulatory variation in Saccharomyces cerevisiae and the role of transcription factors. Nat. Genet. 35, 57-64 (2003).
-
(2003)
Nat. Genet
, vol.35
, pp. 57-64
-
-
Yvert, G.1
-
10
-
-
34247629588
-
Genetic reconstruction of a functional transcriptional regulatory network
-
Hu, Z., Killion, P.J. & Iyer, V.R. Genetic reconstruction of a functional transcriptional regulatory network. Nat. Genet. 39, 683-687 (2007).
-
(2007)
Nat. Genet
, vol.39
, pp. 683-687
-
-
Hu, Z.1
Killion, P.J.2
Iyer, V.R.3
-
11
-
-
4544352942
-
Transcriptional regulatory code of a eukaryotic genome
-
Harbison, C.T. et al. Transcriptional regulatory code of a eukaryotic genome. Nature 431, 99-104 (2004)
-
(2004)
Nature
, vol.431
, pp. 99-104
-
-
Harbison, C.T.1
-
12
-
-
1542328960
-
Identification and distinct regulation of yeast TATA box-containing genes
-
Basehoar, A.D., Zanton, S.J. & Pugh, B.F. Identification and distinct regulation of yeast TATA box-containing genes. Cell 116, 699-709 (2004).
-
(2004)
Cell
, vol.116
, pp. 699-709
-
-
Basehoar, A.D.1
Zanton, S.J.2
Pugh, B.F.3
-
13
-
-
1542285166
-
A genome-wide housekeeping role for TFIID and a highly regulated stress-related role for SAGA in Saccharomyces cerevisiae
-
Huisinga, K.L. & Pugh, B.F. A genome-wide housekeeping role for TFIID and a highly regulated stress-related role for SAGA in Saccharomyces cerevisiae. Mol. Cell 13, 573-585 (2004).
-
(2004)
Mol. Cell
, vol.13
, pp. 573-585
-
-
Huisinga, K.L.1
Pugh, B.F.2
-
14
-
-
0036810412
-
Interplay of TBP inhibitors in global transcriptional control
-
Chitikila, C., Huisinga, K.L., Irvin, J.D., Basehoar, A.D. & Pugh, B.F. Interplay of TBP inhibitors in global transcriptional control. Mol. Cell 10, 871-882 (2002).
-
(2002)
Mol. Cell
, vol.10
, pp. 871-882
-
-
Chitikila, C.1
Huisinga, K.L.2
Irvin, J.D.3
Basehoar, A.D.4
Pugh, B.F.5
-
15
-
-
0033152140
-
A role for TBP dimerization in preventing unregulated gene expression
-
Jackson-Fisher, A.J., Chitikila, C., Mitra, M. & Pugh, B.F. A role for TBP dimerization in preventing unregulated gene expression. Mol. Cell 3, 717-727 (1999).
-
(1999)
Mol. Cell
, vol.3
, pp. 717-727
-
-
Jackson-Fisher, A.J.1
Chitikila, C.2
Mitra, M.3
Pugh, B.F.4
-
16
-
-
33645224956
-
Genome-wide relationships between TAF1 and histone acetyltransferases in Saccharomyces cerevisiae
-
Durant, M. & Pugh, B.F. Genome-wide relationships between TAF1 and histone acetyltransferases in Saccharomyces cerevisiae. Mol. Cell. Biol. 26, 2791-2802 (2006).
-
(2006)
Mol. Cell. Biol
, vol.26
, pp. 2791-2802
-
-
Durant, M.1
Pugh, B.F.2
-
17
-
-
0042697343
-
The evolution of transcriptional regulation in eukaryotes
-
Wray, G.A. et al. The evolution of transcriptional regulation in eukaryotes. Mol. Biol. Evol. 20, 1377-1419 (2003).
-
(2003)
Mol. Biol. Evol
, vol.20
, pp. 1377-1419
-
-
Wray, G.A.1
-
18
-
-
34249035861
-
Environmental effects on gene expression phenotype have regional biases in the human genome
-
Choi, J.K. & Kim, S.C. Environmental effects on gene expression phenotype have regional biases in the human genome. Genetics 175, 1607-1613 (2007).
-
(2007)
Genetics
, vol.175
, pp. 1607-1613
-
-
Choi, J.K.1
Kim, S.C.2
-
19
-
-
23044514669
-
Epigenetic differences arise during the lifetime of monozygotic twins
-
Fraga, M.F. et al. Epigenetic differences arise during the lifetime of monozygotic twins. Proc. Natl. Acad. Sci. USA 102, 10604-10609 (2005).
-
(2005)
Proc. Natl. Acad. Sci. USA
, vol.102
, pp. 10604-10609
-
-
Fraga, M.F.1
-
20
-
-
48949094754
-
-
Ronald, J., Brem, R.B., Whittle, J. & Kruglyak, L. Local regulatory variation in Saccharomyces cerevisiae. PLoS Genet. 1, e25 (2005).
-
Ronald, J., Brem, R.B., Whittle, J. & Kruglyak, L. Local regulatory variation in Saccharomyces cerevisiae. PLoS Genet. 1, e25 (2005).
-
-
-
-
21
-
-
0032567081
-
Dissecting the regulatory circuitry of a eukaryotic genome
-
Holstege, F.C. et al. Dissecting the regulatory circuitry of a eukaryotic genome. Cell 95, 717-728 (1998).
-
(1998)
Cell
, vol.95
, pp. 717-728
-
-
Holstege, F.C.1
-
22
-
-
0033604609
-
Chromosomal landscape of nucleosome-dependent gene expression and silencing in yeast
-
Wyrick, J.J. et al. Chromosomal landscape of nucleosome-dependent gene expression and silencing in yeast. Nature 402, 418-421 (1999).
-
(1999)
Nature
, vol.402
, pp. 418-421
-
-
Wyrick, J.J.1
-
23
-
-
23944462969
-
Genome-wide map of nucleosome acetylation and methylation in yeast
-
Pokholok, D.K. et al. Genome-wide map of nucleosome acetylation and methylation in yeast. Cell 122, 517-527 (2005).
-
(2005)
Cell
, vol.122
, pp. 517-527
-
-
Pokholok, D.K.1
-
24
-
-
0037389799
-
Gloal and specific transcriptional repression by the histone H3 amino terminus in yeast
-
Sabet, N. et al. Gloal and specific transcriptional repression by the histone H3 amino terminus in yeast. Proc. Natl. Acad. Sci. USA 100, 4084-4089 (2003).
-
(2003)
Proc. Natl. Acad. Sci. USA
, vol.100
, pp. 4084-4089
-
-
Sabet, N.1
-
25
-
-
0032750220
-
Diverse and dynamic functions of the Sir silencing complex
-
Guarente, L. Diverse and dynamic functions of the Sir silencing complex. Nat. Genet. 23, 281-285 (1999).
-
(1999)
Nat. Genet
, vol.23
, pp. 281-285
-
-
Guarente, L.1
-
26
-
-
14844282303
-
Central role of Ifh1p-Fhl1p interaction in the synthesis of yeast ribosomal proteins
-
Rudra, D., Zhao, Y. & Warner, J.R. Central role of Ifh1p-Fhl1p interaction in the synthesis of yeast ribosomal proteins. EMBO J. 24, 533-542 (2005).
-
(2005)
EMBO J
, vol.24
, pp. 533-542
-
-
Rudra, D.1
Zhao, Y.2
Warner, J.R.3
-
27
-
-
0037050004
-
Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry
-
Ho, Y. e.a. Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry. Nature 415, 180-183 (2002).
-
(2002)
Nature
, vol.415
, pp. 180-183
-
-
Ho, Y.E.A.1
-
28
-
-
33644555054
-
Proteome survey reveals modularity of the yeast cell machinery
-
Gavin, A.C. e.a. Proteome survey reveals modularity of the yeast cell machinery. Nature 440, 631-636 (2006).
-
(2006)
Nature
, vol.440
, pp. 631-636
-
-
Gavin, A.C.E.A.1
-
29
-
-
0036269973
-
Proteomics of the eukaryotic transcription machinery: Identification of proteins associated with components of yeast TFIID by multidimensional mass spectrometry
-
Sanders, S.L., Jennings, J., Canutescu, A., Link, A.J. & Weil, P.A. Proteomics of the eukaryotic transcription machinery: identification of proteins associated with components of yeast TFIID by multidimensional mass spectrometry. Mol. Cell. Biol. 22, 4723-4738 (2002).
-
(2002)
Mol. Cell. Biol
, vol.22
, pp. 4723-4738
-
-
Sanders, S.L.1
Jennings, J.2
Canutescu, A.3
Link, A.J.4
Weil, P.A.5
-
30
-
-
0343924289
-
Repression by Ume6 involves recruitment of a complex containing Sin3 corepressor and Rpd3 histone deacetylase to target promoters
-
Kadosh, D. & Struhl, K. Repression by Ume6 involves recruitment of a complex containing Sin3 corepressor and Rpd3 histone deacetylase to target promoters. Cell 89, 365-371 (1997).
-
(1997)
Cell
, vol.89
, pp. 365-371
-
-
Kadosh, D.1
Struhl, K.2
-
31
-
-
0034817393
-
Widespread collaboration of Isw2 and Sin3-Rpd3 chromatin remodeling complexes in transcriptional repression
-
Fazzio, T.G. et al. Widespread collaboration of Isw2 and Sin3-Rpd3 chromatin remodeling complexes in transcriptional repression. Mol. Cell. Biol. 21, 6450-6460 (2001).
-
(2001)
Mol. Cell. Biol
, vol.21
, pp. 6450-6460
-
-
Fazzio, T.G.1
|