메뉴 건너뛰기




Volumn 8, Issue , 2007, Pages

Discovery of novel alternatively spliced C. elegans transcripts by computational analysis of SAGE data

Author keywords

[No Author keywords available]

Indexed keywords

CAENORHABDITIS ELEGANS PROTEIN; MESSENGER RNA; PRIMER DNA;

EID: 38649091699     PISSN: None     EISSN: 14712164     Source Type: Journal    
DOI: 10.1186/1471-2164-8-447     Document Type: Article
Times cited : (6)

References (29)
  • 1
    • 3042642783 scopus 로고    scopus 로고
    • Splice variants as cancer biomarkers
    • 10.1016/j.clinbiochem.2004.05.015 15234240
    • Brinkman BMN Splice variants as cancer biomarkers Clinical Biochemistry 2004, 37(7):584-594. 10.1016/j.clinbiochem.2004.05.015 15234240
    • (2004) Clinical Biochemistry , vol.37 , Issue.7 , pp. 584-594
    • Brinkman, B.M.N.1
  • 2
    • 7444220147 scopus 로고    scopus 로고
    • Aberrant and alternative splicing in cancer
    • 10.1158/0008-5472.CAN-04-1910 15520162
    • Venables JP Aberrant and alternative splicing in cancer Cancer Research 2004, 64(21):7647-7654. 10.1158/0008-5472.CAN-04-1910 15520162
    • (2004) Cancer Research , vol.64 , Issue.21 , pp. 7647-7654
    • Venables, J.P.1
  • 3
    • 0033287168 scopus 로고    scopus 로고
    • RNA processing and the control of spermatogenesis
    • 10941401
    • Walker WH DFJ Habener JF. RNA processing and the control of spermatogenesis Front Horm Res 1999, 25:34-58. 10941401
    • (1999) Front Horm Res , vol.25 , pp. 34-58
    • Walker, W.H.D.F.J.1    Habener, J.F.2
  • 4
    • 33746731655 scopus 로고    scopus 로고
    • The predominant CD44 splice variant in prostate cancer binds fibronectin, and calcitonin stimulates its expression
    • 16886606
    • Iczkowski KA Omara-Opyene AL Shah GV The predominant CD44 splice variant in prostate cancer binds fibronectin, and calcitonin stimulates its expression Anticancer Res 2006, 26(4B):2863-2872. 16886606
    • (2006) Anticancer Res , vol.26 , Issue.4 B , pp. 2863-2872
    • Iczkowski, K.A.1    Omara-Opyene, A.L.2    Shah, G.V.3
  • 5
    • 5044222204 scopus 로고    scopus 로고
    • How did alternative splicing evolve?
    • 10.1038/nrg1451 15510168
    • Ast G How did alternative splicing evolve? Nat Rev Genet 2004, 5(10):773-782. 10.1038/nrg1451 15510168
    • (2004) Nat Rev Genet , vol.5 , Issue.10 , pp. 773-782
    • Ast, G.1
  • 6
    • 0013394889 scopus 로고    scopus 로고
    • Mechanisms of alternative pre-messenger RNA splicing
    • 10.1146/annurev.biochem.72.121801.161720
    • Black DL Mechanisms of alternative pre-messenger RNA splicing. Annual Revew Biochemistry 2003, 72:291-336. 10.1146/ annurev.biochem.72.121801.161720
    • (2003) Annual Revew Biochemistry , vol.72 , pp. 291-336
    • Black, D.L.1
  • 7
    • 2442694425 scopus 로고    scopus 로고
    • Transcriptome and genome conservation of alternative splicing events in humans and mice
    • 14992493
    • Sugnet CW Kent WJ Ares M Jr Haussler D Transcriptome and genome conservation of alternative splicing events in humans and mice Pac Symp Biocomput 2004, 66-77. 14992493
    • (2004) Pac Symp Biocomput , pp. 66-77
    • Sugnet, C.W.1    Kent, W.J.2    Ares Jr., M.3    Haussler, D.4
  • 8
    • 1642473041 scopus 로고    scopus 로고
    • How prevalent is functional alternative splicing in the human genome?
    • 10.1016/j.tig.2003.12.004 14746986
    • Sorek R Shamir R Ast G How prevalent is functional alternative splicing in the human genome? Trends in Genetics 2004, 20(2):68-71. 10.1016/ j.tig.2003.12.004 14746986
    • (2004) Trends in Genetics , vol.20 , Issue.2 , pp. 68-71
    • Sorek, R.1    Shamir, R.2    Ast, G.3
  • 9
    • 38649118970 scopus 로고    scopus 로고
    • Wormbase http://www.wormbase.org
    • Wormbase
  • 10
    • 0033977575 scopus 로고    scopus 로고
    • The intronerator: Exploring introns and alternative splicing in Caenorabditis elegans
    • 102389 10592190 10.1093/nar/28.1.91
    • Kent WJ Zahler AM The intronerator: Exploring introns and alternative splicing in Caenorabditis elegans Nucleic Acids Res 2000, 28:91-93. 102389 10592190 10.1093/nar/28.1.91
    • (2000) Nucleic Acids Res , vol.28 , pp. 91-93
    • Kent, W.J.1    Zahler, A.M.2
  • 11
    • 0342723790 scopus 로고    scopus 로고
    • Frequent alternative splicing of human genes
    • 310997 10613851 10.1101/gr.9.12.1288
    • Mironov AA Fickett JW Gelfand MS Frequent alternative splicing of human genes Genome Research 1999, 9(12):1288-1293. 310997 10613851 10.1101/ gr.9.12.1288
    • (1999) Genome Research , vol.9 , Issue.12 , pp. 1288-1293
    • Mironov, A.A.1    Fickett, J.W.2    Gelfand, M.S.3
  • 12
    • 0036337915 scopus 로고    scopus 로고
    • A genomic view of alternative splicing
    • 10.1038/ng0102-13 11753382
    • Modrek B Lee C A genomic view of alternative splicing Nature Genetics 2002, 30(1):13-19. 10.1038/ng0102-13 11753382
    • (2002) Nature Genetics , vol.30 , Issue.1 , pp. 13-19
    • Modrek, B.1    Lee, C.2
  • 13
    • 0028789793 scopus 로고
    • Serial analysis of gene expression
    • 10.1126/science.270.5235.484 7570003
    • Velculescu VE Zhang L Vogelstein B Kinzler KW Serial analysis of gene expression Science 1995, 270(5235):484-487. 10.1126/science.270.5235.484 7570003
    • (1995) Science , vol.270 , Issue.5235 , pp. 484-487
    • Velculescu, V.E.1    Zhang, L.2    Vogelstein, B.3    Kinzler, K.W.4
  • 18
    • 19944365069 scopus 로고    scopus 로고
    • Revealing Global Regulatory Features of Mammalian Alternative Splicing Using a Quantitative Microarray Platform
    • 10.1016/j.molcel.2004.12.004 15610736
    • Pan Q Shai O Misquitta C Zhang W Saltzman AL Mohammad N Babak T Siu H Hughes TR Morris QD Revealing Global Regulatory Features of Mammalian Alternative Splicing Using a Quantitative Microarray Platform Molecular Cell 2004, 16(6):929-941. 10.1016/j.molcel.2004.12.004 15610736
    • (2004) Molecular Cell , vol.16 , Issue.6 , pp. 929-941
    • Pan, Q.1    Shai, O.2    Misquitta, C.3    Zhang, W.4    Saltzman, A.L.5    Mohammad, N.6    Babak, T.7    Siu, H.8    Hughes, T.R.9    Morris, Q.D.10
  • 20
    • 0036081355 scopus 로고    scopus 로고
    • Gene Expression Omnibus: NCBI gene expression and hybridization array data repository
    • 99122 11752295 10.1093/nar/30.1.207
    • Edgar R Domrachev M Lash AE Gene Expression Omnibus: NCBI gene expression and hybridization array data repository Nucl Acids Res 2002, 30(1):207-210. 99122 11752295 10.1093/nar/30.1.207
    • (2002) Nucl Acids Res , vol.30 , Issue.1 , pp. 207-210
    • Edgar, R.1    Domrachev, M.2    Lash, A.E.3
  • 22
    • 0043009663 scopus 로고    scopus 로고
    • SAGE surveys C. elegans carbohydrate metabolism: Evidence for an anaerobic shift in the long-lived dauer larva
    • 10.1016/S0047-6374(03)00132-5 12875742
    • Holt SJ Riddle DL SAGE surveys C. elegans carbohydrate metabolism: evidence for an anaerobic shift in the long-lived dauer larva Mech Ageing Dev 2003, 124(7):779-800. 10.1016/S0047-6374(03)00132-5 12875742
    • (2003) Mech Ageing Dev , vol.124 , Issue.7 , pp. 779-800
    • Holt, S.J.1    Riddle, D.L.2
  • 24
    • 0037803473 scopus 로고    scopus 로고
    • Assessment of SAGE in transcript identification
    • 403648 12743019 10.1101/gr.873003
    • Pleasance ED Marra MA Jones SJ Assessment of SAGE in transcript identification. Genome Res 2003, 13(6A):1203-1215. 403648 12743019 10.1101/gr.873003
    • (2003) Genome Res , vol.13 , Issue.6 A , pp. 1203-1215
    • Pleasance, E.D.1    Marra, M.A.2    Jones, S.J.3
  • 26
    • 0031978181 scopus 로고    scopus 로고
    • Base-calling of automated sequencer traces using phred. II. Error probabilities
    • 9521922
    • Ewing B Green P Base-calling of automated sequencer traces using phred. II. Error probabilities Genome Res 1998, 8(3):186-194. 9521922
    • (1998) Genome Res , vol.8 , Issue.3 , pp. 186-194
    • Ewing, B.1    Green, P.2
  • 27
    • 0031955518 scopus 로고    scopus 로고
    • Base-calling of automated sequencer traces using phred. I. Accuracy assessment
    • 9521921
    • Ewing B Hillier L Wendl MC Green P Base-calling of automated sequencer traces using phred. I. Accuracy assessment Genome Res 1998, 8(3):175-185. 9521921
    • (1998) Genome Res , vol.8 , Issue.3 , pp. 175-185
    • Ewing, B.1    Hillier, L.2    Wendl, M.C.3    Green, P.4
  • 28
  • 29
    • 34447341453 scopus 로고    scopus 로고
    • Genes that may modulate longevity in C. elegans in both dauer larvae and long-lived daf-2 adults
    • 10.1016/j.exger.2007.04.002 17543485
    • Ruzanov P Riddle DL Marra MA McKay SJ Jones SM Genes that may modulate longevity in C. elegans in both dauer larvae and long-lived daf-2 adults Experimental Gerontology 2007, 42(8):825-839. 10.1016/ j.exger.2007.04.002 17543485
    • (2007) Experimental Gerontology , vol.42 , Issue.8 , pp. 825-839
    • Ruzanov, P.1    Riddle, D.L.2    Marra, M.A.3    McKay, S.J.4    Jones, S.M.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.