Genetic resources in maritime pine (Pinus pinaster Aiton): Molecular and quantitative measures of genetic variation and differentiation among maternal lineages

Forest Ecology and Management

Volumn 197, Issue 1-3, 2004, Pages 103-115

  González Martínez, Santiago C ^a   Mariette, Stéphanie ^b   Ribeiro, Maria Margarida ^c   Burban, Christian ^b   Raffin, Annie ^b   Chambel, Maria Regina ^a   Ribeiro, Carla Alexandra M ^c   Aguiar, Alexandre ^d   Plomion, Christophe ^b   Alía, Ricardo ^a   Gil, Luis ^e   Vendramin, Giovanni Giuseppe ^f   Kremer, Antoine ^b  

^a Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria   (Spain)

^b CEMAGREF   (France)

^c Escola Superior Agrá ria   (Portugal)

^d Estacao Florestal Nacional   (Portugal)

^e Fisiologia y Genetica Forestal   (Spain)

^f Instituto di Genetica Vegetale   (Italy)

Author keywords

Genetic resources; Management Units; Molecular markers; Pinus pinaster; Quantitative variation

Indexed keywords

DISEASES; DNA; GENES;

ALLOZYMES; DISEASE RESISTANCE; LINEAGES;

GENETIC ENGINEERING;

CONSERVATION GENETICS; GENE FLOW; GENETIC DIFFERENTIATION; GENETIC MARKER; GENETIC VARIATION; NATIVE SPECIES;

DISEASES; GENES; GENETIC ENGINEERING; NUCLEIC ACIDS;

EURASIA; EUROPE; FRANCE; PORTUGAL; SOUTHERN EUROPE; SPAIN; WESTERN EUROPE;

CONIFEROPHYTA; MUS; PINUS PINASTER;

EID: 3843139509     PISSN: 03781127     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.foreco.2004.05.008     Document Type: Conference Paper

References (54)

1. Aguiar A., Roldão M.I., Esteves I., Baeta J. Ensaio de proveniências de Pinus pinaster Ait. Resultados de quatro anos de ensaio. Silva Lusitana. 7:1999;39-47
2. Aguiar A., Almeida H., Borralho N. Genetic control of growth, wood density and stem characteristics of Pinus pinaster in Portugal. Silva Lusitana. 11:2003;131-139
3. Alía R., Gil L., Pardos J.A. Performance of 43 Pinus pinaster provenances on 5 locations in Central Spain. Silvae Genet. 44:1995;75-81
4. Alía R., Moro J., Denis J.B. Performance of Pinus pinaster provenances in Spain: interpretation of the genotype by environment interaction. Can. J. For. Res. 27:1997;1548-1559
5. Barba, D., González-Martínez, S.C., Ribeiro, M.M., Agúndez, D., Salvador, L., Alía, R., Gil, L., 2001. Variación genética de Pinus pinaster Ait.: aplicación a la identificación y caracterización del material forestal de reproducción (MFR). In: Proceedings of the Third Spanish Forestry Congress, vol. V, pp. 263-269.
6. Bekessy S.A., Ennos R.A., Burgman M.A., Newton A.C., Ades P.K. Neutral DNA markers fail to detect genetic divergence in an ecologically important trait. Biol. Conserv. 110:2003;267-275
7. Burban C., Petit R.J. Phylogeography of maritime pine inferred with organelle markers having contrasted inheritance. Mol. Ecol. 12:2003;1487-1495
8. Burban C., Petit R.J., Carcreff E., Jactel H. Rangewide variation of the maritime pine bast scale Matsucoccus feytaudi Duc. (Homoptera: Matsucoccidae) in relation to the genetic structure of its host. Mol. Ecol. 8:1999;1593-1602
9. Chong D.K.X., Yang R.-C., Yeh F.C. Nucleotide divergence between populations of trembling aspen (Populus tremuloides) estimated with RAPDs. Curr. Genet. 26:1994;374-376
10. Crandall K.A., Bininda-Emonds O.R.P., Mace G.M., Wayne R.K. Considering evolutionary processes in conservation biology. TREE. 15:2000;290-295
11. Danjon F. Stand features and height growth in a 36-year-old maritime pine (Pinus pinaster Ait.) provenance test. Silvae Genet. 43:1994;52-62
12. Derory J., Mariette S., González-Martínez S.C., Chagné D., Madur D., Gerber S., Ribeiro M.M., Plomion C. What can nuclear microsatellites tell us about maritime pine genetic resources conservation and provenances certification strategies. Ann. For. Sci. 59:2002;699-708
13. Desprez L.M., Baradat P. Variation in susceptibility to twisting rust of maritime pine. Ann. Sci. For. 48:1991;497-511
14. El-Kassaby Y.A. Associations between allozyme genotypes and quantitative traits in Douglas-fir (Pseudotsuga menziesii (Mirb.) Franco). Genetics. 101:1982;103-115
15. Ennos R.A. Estimating the relative rates of pollen and seed migration among plant populations. Heredity. 72:1994;250-259
16. Fraser D.J., Bernatchez L. Adaptive evolutionary conservation: towards a unified concept for defining conservation units. Mol. Ecol. 10:2001;2741-2752
17. González-Martínez, S.C., 2001. Estructura poblacional y flujo genético de Pinus pinaster Aiton en el noroeste de la Península Ibérica. Ph.D. Thesis. Universidad Politécnica de Madrid, Madrid.
18. González-Martínez S.C., Alía R., Gil L. Population genetic structure in a Mediterranean pine (Pinus pinaster Ait.): a comparison of allozyme markers and quantitative traits. Heredity. 89:2002;199-206
19. González-Martínez S.C., Gerber S., Cervera M.T., Martínez-Zapater J.M., Gil L., Alía R. Seed gene flow and fine-scale structure in a Mediterranean pine (Pinus pinaster Ait.) using nuclear microsatellite markers. Theor. Appl. Genet. 104:2002;1290-1297
20. González-Martínez S.C., Gerber S., Cervera M.T., Martínez-Zapater J.M., Gil L., Alía R. Selfing and sibship structure in a two-cohort stand of maritime pine (Pinus pinaster Ait.) using nuclear SSR markers. Ann. For. Sci. 60:2003;115-121
21. Guyon J.P., Kremer A. Stabilité phénotipique de la croissance en hauteur et cinétique journalière de la pression de sève et de la transpiration chez le Pin maritime (Pinus pinaster Ait.). Can. J. For. Res. 12:1982;936-946
22. Hamman A., El-Kassaby Y.A., Koshy M.P., Namkoong G. Multivariate analysis of allozymic and quantitative trait variation in Alnus rubra: geographic patterns and evolutionary implications. Can. J. For. Res. 28:1998;1557-1565
23. Hewitt G.M. Some genetic consequences of ice ages, and their role in divergence and speciation. Biol. J. Linn. Soc. 58:1996;247-276
24. Hewitt G.M. Speciation, hybrid zones and phylogeography - or seeing genes in space and time. Mol. Ecol. 10:2001;537-549
25. Hu X.-S., Ennos R.A. Impacts of seed and pollen flow on population genetic structure for plant genomes with three contrasting modes of inheritance. Genetics. 152:1999;441-450
26. Kremer A. Déterminisme génétique de la croissance en hauteur du Pin maritime (Pinus pinaster Ait.). Comportement interannuel. Interaction genotype x année. Ann. Sci. For. 38:1981;331-335
27. Kremer A. Diversité génétique et variabilité des caractères phénotypiques chez les arbres forestiers. Genet. Sel. Evol. 26:1994;105-123
28. Kremer A., Kleinschmit J., Cottrell J., Cundall E.P., Deans J.D., Ducousso A., König A.O., Lowe A.J., Munro R.C., Petit R.J., Stephan B.R. Is there a correlation between chloroplastic and nuclear divergence, or what are the roles of history and selection on genetic diversity in European oaks. For. Ecol. Manage. 156:2002;75-87
29. Lagercrantz U., Ryman N. Genetic structure of Norway Spruce (Picea abies): concordance of morphological and allozymic variation. Evolution. 44:1990;38-53
30. Latta R.G., Mitton J.B. A comparison of population differentiation across four classes of gene marker in Limber pine (Pinus flexilis James). Genetics. 146:1997;1153-1163
31. Liepelt S., Bialozyt R., Ziegenhagen B. Wind-dispersed pollen mediates postglacial gene flow among refugia. Proc. Natl. Acad. Sci. U.S.A. 99:2002;14590-14594
32. Lynch, M., 1996. A quantitative-genetic perspective on conservation issues. In: Conservation genetics: case histories from nature. Chapman & Hall, New York, pp. 471-501.
33. Mariette S., Chagné D., Lézier C., Pastuszka P., Raffin A., Plomion C., Kremer A. Genetic diversity within and among Pinus pinaster populations: comparison between AFLP and microsatellite markers. Heredity. 86:2001;469-479
34. Mariette S., Le Corre V., Austerlitz F., Kremer A. Sampling within the genome for measuring within-population diversity: trade-offs between markers. Mol. Ecol. 11:2002;1145-1156
35. McKay J.K., Latta R.G. Adaptive population divergence: markers, QTL and traits. TREE. 17:2002;285-291
36. Morgan K.K., Hicks J., Spitze K., Latta L., Pfrender M.E., Weaver C.S., Ottone M., Lynch M. Patterns of genetic architecture for life-history traits and molecular markers in a subdivided species. Evolution. 55:2001;1753-1761
37. Moritz C. Defining 'Evolutionary Significant Units' for conservation. TREE. 9:1994;373-375
38. Nei, M., 1987. Molecular Evolutionary Genetics. Columbia University Press, New York.
39. Newton A.C., Allnutt T.R., Gillies A.C.M., Lowe A.J., Ennos R.A. Molecular phylogeography, intraspecific variation and the conservation of tree species. TREE. 14:1999;140-145
40. Nguyen Q.A., Derre N., Lamant A., Seillac P. Tolerance to sodium chloride and Na/K selectivity in 3 provenances of maritime pine (Pinus pinaster Ait.). Ann. Sci. For. 52:1995;465-475
41. Petit R.J., El-Mousadik A., Pons O. Identifying populations for conservation on the basis of genetic markers. Conserv. Biol. 12:1998;844-855
42. Pfrender M.E., Spitze K., Hicks J., Morgan K., Latta L., Lynch M. Lack of concordance between genetic diversity estimates at the molecular and quantitative-trait levels. Conserv. Genet. 1:2000;263-269
43. Reed D.H., Frankham R. How closely related are molecular and quantitative measures of genetic variation? A meta-analysis. Evolution. 55:2001;1095-1103
44. Ribeiro, M.M., 2001. Genetics of Pinus pinaster Aiton with cytoplasmic and nuclear markers. Ph.D. Thesis. Swedish University of Agricultural Sciences, Umeå.
45. Ribeiro M.M., Plomion C., Petit R.J., Vendramin G.G., Szmidt A.E. Variation in chloroplast single-sequence repeats in Portuguese maritime pine (Pinus pinaster Ait.). Theor. Appl. Genet. 102:2001;97-103
46. Ribeiro M.M., Mariette S., Vendramin G.G., Szmidt A.E., Plomion C., Kremer A. Comparison of genetic diversity estimates within and among populations of maritime pine using chloroplast simple-sequence repeats and amplified fragment length polymorphism data. Mol. Ecol. 11:2002;869-877
47. Rice W.R. Analysing tables of statistical tests. Evolution. 43:1989;223-225
48. Salvador L., Alía R., Agúndez D., Gil L. Genetic variation and migration pathways of maritime pine (Pinus pinaster Ait.) in the Iberian Peninsula. Theor. Appl. Genet. 100:2000;89-95
49. Schubert R., Mueller-Starck G., Riegel R. Development of EST-PCR markers and monitoring their intrapopulational genetic variation in Picea abies (L.) Karst. Theor. Appl. Genet. 103:2001;1223-1231
50. Schvester D. Incidence of Matsucoccus feytaudi Duc. on maritime pine of different origins (Pinus pinaster Ait.) in the Mediterranean region. Comptes Rendus des Séances de l'Académie d'Agriculture de France. 68:1982;1324-1333
51. Sinclair W.T., Morman J.D., Ennos R.A. The postglacial history of Scots pine (Pinus sylvestris L.) in western Europe: evidence from mitochondrial DNA variation. Mol. Ecol. 8:1999;83-88
52. van Tienderen P.H., de Haan A.A., van der Linden C.G., Vosman B. Biodiversity assessment using markers for ecologically important traits. TREE. 17:2002;577-582
53. Vendramin G.G., Anzidei M., Madaghiele A., Bucci G. Distribution of genetic diversity in Pinus pinaster Ait. as revealed by chloroplast microsatellites. Theor. Appl. Genet. 97:1998;456-463
54. Willis J.H., Orr H.A. Increased heritable variation following population bottlenecks: the role of dominance. Evolution. 47:1993;949-957