-
1
-
-
0024988375
-
Protein database searches for multiple alignments
-
Altschul SF, Lipman DJ (1990) Protein database searches for multiple alignments. Proc Natl Acad Sci U S A 87:5509-5513
-
(1990)
Proc Natl Acad Sci U S a
, vol.87
, pp. 5509-5513
-
-
Altschul, S.F.1
Lipman, D.J.2
-
2
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
-
Altschul SF, Madden TL, Schaffer AA, Zhang J, Zhang Z, Miller W, Lipman DJ (1997) Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res 25:3389-3402
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schaffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
3
-
-
33748743530
-
Insights into extreme thermoacidophily based on genome analysis of Picrophilus torridus and other thermoacidophilic archaea
-
Angelov A, Liebl W (2006) Insights into extreme thermoacidophily based on genome analysis of Picrophilus torridus and other thermoacidophilic archaea. J Biotechnol 126:3-10
-
(2006)
J Biotechnol
, vol.126
, pp. 3-10
-
-
Angelov, A.1
Liebl, W.2
-
5
-
-
33748037939
-
Amylases alpha and beta
-
Bernfeld P (1955) Amylases alpha and beta. Methods Enzymol 1:149-158
-
(1955)
Methods Enzymol
, vol.1
, pp. 149-158
-
-
Bernfeld, P.1
-
6
-
-
0142119484
-
Viewing and annotating sequence data with Artemis
-
Berriman M, Rutherford K (2003) Viewing and annotating sequence data with Artemis. Brief Bioinform 4:124-132
-
(2003)
Brief Bioinform
, vol.4
, pp. 124-132
-
-
Berriman, M.1
Rutherford, K.2
-
7
-
-
0036525719
-
Starch-hydrolyzing enzymes from thermophilic archaea and bacteria
-
Bertoldo C, Antranikian G (2002) Starch-hydrolyzing enzymes from thermophilic archaea and bacteria. Curr Opin Chem Biol 6:151-160
-
(2002)
Curr Opin Chem Biol
, vol.6
, pp. 151-160
-
-
Bertoldo, C.1
Antranikian, G.2
-
8
-
-
37049156324
-
Universal buffer solutions and the dissociation constant of Veronal
-
Britton HTS, Robinson RA (1931) Universal buffer solutions and the dissociation constant of Veronal. J Chem Soc 1931:1456-1462
-
(1931)
J Chem Soc
, vol.1931
, pp. 1456-1462
-
-
Britton, H.T.S.1
Robinson, R.A.2
-
9
-
-
0028943302
-
Purification and properties of extracellular amylase from the hyperthermophilic archaeon Thermococcus profundus DT5432
-
Chung YC, Kobayashi T, Kanai H, Akiba T, Kudo T (1995) Purification and properties of extracellular amylase from the hyperthermophilic archaeon Thermococcus profundus DT5432. Appl Environ Microbiol 61:1502-1506
-
(1995)
Appl Environ Microbiol
, vol.61
, pp. 1502-1506
-
-
Chung, Y.C.1
Kobayashi, T.2
Kanai, H.3
Akiba, T.4
Kudo, T.5
-
10
-
-
0001973467
-
Carbohydrate-active enzymes: An integrated database approach
-
The Royal Society of Chemistry Cambridge
-
Coutinho PM, Henrissat B (1999) Carbohydrate-active enzymes: an integrated database approach. In: Gilbert HJ, Davies G, Henrissat B, Svensson B (eds) Recent advances in carbohydrate bioengineering. The Royal Society of Chemistry, Cambridge, pp 3-12
-
(1999)
Recent Advances in Carbohydrate Bioengineering
, pp. 3-12
-
-
Coutinho, P.M.1
Henrissat, B.2
Gilbert, H.J.3
Davies, G.4
Henrissat, B.5
Svensson, B.6
-
11
-
-
0028183010
-
Structural similarities in glucoamylase by hydrophobic cluster analysis
-
Coutinho PM, Reilly PJ (1994a) Structural similarities in glucoamylase by hydrophobic cluster analysis. Protein Eng 7:749-760
-
(1994)
Protein Eng
, vol.7
, pp. 749-760
-
-
Coutinho, P.M.1
Reilly, P.J.2
-
12
-
-
0028158011
-
Structure-function relationships in the catalytic and starch binding domains of glucoamylase
-
Coutinho PM, Reilly PJ (1994b) Structure-function relationships in the catalytic and starch binding domains of glucoamylase. Protein Eng 7:393-400
-
(1994)
Protein Eng
, vol.7
, pp. 393-400
-
-
Coutinho, P.M.1
Reilly, P.J.2
-
13
-
-
0035988323
-
The genome of Methanosarcina mazei: Evidence for lateral gene transfer between bacteria and archaea
-
Deppenmeier U, Johann A, Hartsch T, Merkl R, Schmitz RA, Martinez-Arias R, Henne A, Wiezer A, Baumer S, Jacobi C et al (2002) The genome of Methanosarcina mazei: evidence for lateral gene transfer between bacteria and archaea. J Mol Microbiol Biotechnol 4:453-461
-
(2002)
J Mol Microbiol Biotechnol
, vol.4
, pp. 453-461
-
-
Deppenmeier, U.1
Johann, A.2
Hartsch, T.3
Merkl, R.4
Schmitz, R.A.5
Martinez-Arias, R.6
Henne, A.7
Wiezer, A.8
Baumer, S.9
Jacobi, C.10
-
14
-
-
3242771843
-
Characterization of Ferroplasma isolates and Ferroplasma acidarmanus sp. nov., extreme acidophiles from acid mine drainage and industrial bioleaching environments
-
Dopson M, Baker-Austin C, Hind A, Bowman JP, Bond PL (2004) Characterization of Ferroplasma isolates and Ferroplasma acidarmanus sp. nov., extreme acidophiles from acid mine drainage and industrial bioleaching environments. Appl Environ Microbiol 70:2079-2088
-
(2004)
Appl Environ Microbiol
, vol.70
, pp. 2079-2088
-
-
Dopson, M.1
Baker-Austin, C.2
Hind, A.3
Bowman, J.P.4
Bond, P.L.5
-
15
-
-
2942682647
-
Genome sequence of Picrophilus torridus and its implications for life around pH 0
-
Futterer O, Angelov A, Liesegang H, Gottschalk G, Schleper C, Schepers B, Dock C, Antranikian G, Liebl W (2004) Genome sequence of Picrophilus torridus and its implications for life around pH 0. Proc Natl Acad Sci U S A 101:9091-9096
-
(2004)
Proc Natl Acad Sci U S a
, vol.101
, pp. 9091-9096
-
-
Futterer, O.1
Angelov, A.2
Liesegang, H.3
Gottschalk, G.4
Schleper, C.5
Schepers, B.6
Dock, C.7
Antranikian, G.8
Liebl, W.9
-
16
-
-
37449005390
-
-
GOLD Available at Accessed on October 11th 2006
-
GOLD (2006) The Genomes On Line Database. Available at www.genomesonline.org. Accessed on October 11th 2006
-
(2006)
The Genomes on Line Database
-
-
-
17
-
-
4944254822
-
Complete genome sequence of the genetically tractable hydrogenotrophic methanogen Methanococcus maripaludis
-
Hendrickson EL, Kaul R, Zhou Y, Bovee D, Chapman P, Chung J, Conway de Macario E, Dodsworth JA, Gillett W, Graham DE et al (2004) Complete genome sequence of the genetically tractable hydrogenotrophic methanogen Methanococcus maripaludis. J Bacteriol 186:6956-6969
-
(2004)
J Bacteriol
, vol.186
, pp. 6956-6969
-
-
Hendrickson, E.L.1
Kaul, R.2
Zhou, Y.3
Bovee, D.4
Chapman, P.5
Chung, J.6
Conway De MacArio, E.7
Dodsworth, J.A.8
Gillett, W.9
Graham, D.E.10
-
18
-
-
0026055308
-
A classification of glycosyl hydrolases based on amino acid sequence similarities
-
Pt 2
-
Henrissat B (1991) A classification of glycosyl hydrolases based on amino acid sequence similarities. Biochem J 280(Pt 2):309-316
-
(1991)
Biochem J
, vol.280
, pp. 309-316
-
-
Henrissat, B.1
-
19
-
-
0027225980
-
New families in the classification of glycosyl hydrolases based on amino acid sequence similarities
-
Pt 3
-
Henrissat B, Bairoch A (1993) New families in the classification of glycosyl hydrolases based on amino acid sequence similarities. Biochem J 293(Pt 3):781-788
-
(1993)
Biochem J
, vol.293
, pp. 781-788
-
-
Henrissat, B.1
Bairoch, A.2
-
20
-
-
0011720368
-
Construction and characterization of mutant glucoamylases from the yeast Saccharomycopsis fibuligera
-
Itoh T, Sakata Y, Akada R, Nimi O, Yamashita I (1989) Construction and characterization of mutant glucoamylases from the yeast Saccharomycopsis fibuligera. Agric Biol Chem 53:3159-3167
-
(1989)
Agric Biol Chem
, vol.53
, pp. 3159-3167
-
-
Itoh, T.1
Sakata, Y.2
Akada, R.3
Nimi, O.4
Yamashita, I.5
-
21
-
-
14344277180
-
Archaeal adaptation to higher temperatures revealed by genomic sequence of Thermoplasma volcanium
-
Kawashima T, Amano N, Koike H, Makino S, Higuchi S, Kawashima-Ohya Y, Watanabe K, Yamazaki M, Kanehori K, Kawamoto T et al (2000) Archaeal adaptation to higher temperatures revealed by genomic sequence of Thermoplasma volcanium. Proc Natl Acad Sci U S A 97:14257-14262
-
(2000)
Proc Natl Acad Sci U S a
, vol.97
, pp. 14257-14262
-
-
Kawashima, T.1
Amano, N.2
Koike, H.3
Makino, S.4
Higuchi, S.5
Kawashima-Ohya, Y.6
Watanabe, K.7
Yamazaki, M.8
Kanehori, K.9
Kawamoto, T.10
-
22
-
-
3242754487
-
Properties of a novel thermostable glucoamylase from the hyperthermophilic archaeon Sulfolobus solfataricus in relation to starch processing
-
Kim MS, Park JT, Kim YW, Lee HS, Nyawira R, Shin HS, Park CS, Yoo SH, Kim YR, Moon TW et al (2004) Properties of a novel thermostable glucoamylase from the hyperthermophilic archaeon Sulfolobus solfataricus in relation to starch processing. Appl Environ Microbiol 70:3933-3940
-
(2004)
Appl Environ Microbiol
, vol.70
, pp. 3933-3940
-
-
Kim, M.S.1
Park, J.T.2
Kim, Y.W.3
Lee, H.S.4
Nyawira, R.5
Shin, H.S.6
Park, C.S.7
Yoo, S.H.8
Kim, Y.R.9
Moon, T.W.10
-
23
-
-
0014949207
-
Cleavage of structural proteins during the assembly of the head of bacteriophage T4
-
Laemmli UK (1970) Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature 227:680-685
-
(1970)
Nature
, vol.227
, pp. 680-685
-
-
Laemmli, U.K.1
-
24
-
-
0029361087
-
Enzyme and microbial systems involved in starch processing
-
Nigam P, Singh D (1995) Enzyme and microbial systems involved in starch processing. Enzyme Microb Technol 17:770-778
-
(1995)
Enzyme Microb Technol
, vol.17
, pp. 770-778
-
-
Nigam, P.1
Singh, D.2
-
26
-
-
0034727087
-
The genome sequence of the thermoacidophilic scavenger Thermoplasma acidophilum
-
Ruepp A, Graml W, Santos-Martinez ML, Koretke KK, Volker C, Mewes HW, Frishman D, Stocker S, Lupas AN, Baumeister W (2000) The genome sequence of the thermoacidophilic scavenger Thermoplasma acidophilum. Nature 407:508-513
-
(2000)
Nature
, vol.407
, pp. 508-513
-
-
Ruepp, A.1
Graml, W.2
Santos-Martinez, M.L.3
Koretke, K.K.4
Volker, C.5
Mewes, H.W.6
Frishman, D.7
Stocker, S.8
Lupas, A.N.9
Baumeister, W.10
-
29
-
-
0034731427
-
Glucoamylase: Structure/function relationships, and protein engineering
-
Sauer J, Sigurskjold BW, Christensen U, Frandsen TP, Mirgorodskaya E, Harrison M, Roepstorff P, Svensson B (2000) Glucoamylase: structure/function relationships, and protein engineering. Biochim Biophys Acta 1543:275-293
-
(2000)
Biochim Biophys Acta
, vol.1543
, pp. 275-293
-
-
Sauer, J.1
Sigurskjold, B.W.2
Christensen, U.3
Frandsen, T.P.4
Mirgorodskaya, E.5
Harrison, M.6
Roepstorff, P.7
Svensson, B.8
-
30
-
-
33746053841
-
Characterization of a novel glucoamylase from the thermoacidophilic archaeon Picrophilus torridus heterologously expressed in E. coli
-
Schepers B, Thiemann V, Antranikian G (2006) Characterization of a novel glucoamylase from the thermoacidophilic archaeon Picrophilus torridus heterologously expressed in E. coli. Eng Life Sci 6:311-317
-
(2006)
Eng Life Sci
, vol.6
, pp. 311-317
-
-
Schepers, B.1
Thiemann, V.2
Antranikian, G.3
-
31
-
-
0017183140
-
Thermoplasma acidophilum: Intracellular pH and potassium concentration
-
Searcy DG (1976) Thermoplasma acidophilum: intracellular pH and potassium concentration. Biochim Biophys Acta 451:278-286
-
(1976)
Biochim Biophys Acta
, vol.451
, pp. 278-286
-
-
Searcy, D.G.1
-
32
-
-
0036419048
-
Novel thermoactive glucoamylases from the thermoacidophilic archaea Thermoplasma acidophilum, Picrophilus torridus and Picrophilus oshimae
-
Serour E, Antranikian G (2002) Novel thermoactive glucoamylases from the thermoacidophilic archaea Thermoplasma acidophilum, Picrophilus torridus and Picrophilus oshimae. Antonie Van Leeuwenhoek 81:73-83
-
(2002)
Antonie Van Leeuwenhoek
, vol.81
, pp. 73-83
-
-
Serour, E.1
Antranikian, G.2
-
33
-
-
0027400361
-
Functional roles of the invariant aspartic acid 55, tyrosine 306, and aspartic acid 309 in glucoamylase from Aspergillus awamori studied by mutagenesis
-
Sierks MR, Svensson B (1993) Functional roles of the invariant aspartic acid 55, tyrosine 306, and aspartic acid 309 in glucoamylase from Aspergillus awamori studied by mutagenesis. Biochemistry 32:113-1117
-
(1993)
Biochemistry
, vol.32
, pp. 113-1117
-
-
Sierks, M.R.1
Svensson, B.2
-
34
-
-
0027968068
-
CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
-
Thompson JD, Higgins DG, Gibson TJ (1994) CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22:4673-4680
-
(1994)
Nucleic Acids Res
, vol.22
, pp. 4673-4680
-
-
Thompson, J.D.1
Higgins, D.G.2
Gibson, T.J.3
-
35
-
-
0031574072
-
The CLUSTAL_X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
-
Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG (1997) The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25:4876-4882
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 4876-4882
-
-
Thompson, J.D.1
Gibson, T.J.2
Plewniak, F.3
Jeanmougin, F.4
Higgins, D.G.5
-
36
-
-
0034891857
-
Novel glucoamylase-type enzymes from Thermoactinomyces vulgaris and Methanococcus jannaschii whose genes are found in the flanking region of the alpha-amylase genes
-
Uotsu-Tomita R, Tonozuka T, Sakai H, Sakano Y (2001) Novel glucoamylase-type enzymes from Thermoactinomyces vulgaris and Methanococcus jannaschii whose genes are found in the flanking region of the alpha-amylase genes. Appl Microbiol Biotechnol 56:465-473
-
(2001)
Appl Microbiol Biotechnol
, vol.56
, pp. 465-473
-
-
Uotsu-Tomita, R.1
Tonozuka, T.2
Sakai, H.3
Sakano, Y.4
|