The U3 small nucleolar ribonucleoprotein component Imp4p is a telomeric DNA-binding protein

Biochemical Journal

Volumn 408, Issue 3, 2007, Pages 387-393

  Hsieh, Yi Ching ^a   Tu, Pei Jung ^a   Lee, Ying Yuan ^a   Kuo, Chun Chen ^a   Lin, Yi Chien ^a   Wu, Chi Fang ^a   Lin, Jing Jer ^a  

^a NATIONAL YANG MING UNIVERSITY   (Taiwan)

Author keywords

DNA binding; Imp4; rRNA; Small nucleolar ribonucleoprotein (snoRNP); Telomere; Yeast

Indexed keywords

BINDING ACTIVITIES; DNA BINDING; ELECTROPHORETIC MOBILITY SHIFT ASSAYS; SMALL NUCLEOLAR RIBONUCLEOPROTEINS;

DNA; ELECTROPHORETIC MOBILITY; RNA; YEAST;

PROTEINS;

INOSINE PHOSPHATE; PROTEIN IMP4P; RECOMBINANT PROTEIN; SINGLE STRANDED DNA; SMALL NUCLEOLAR RIBONUCLEOPROTEIN; TELOMERE BINDING PROTEIN; UNCLASSIFIED DRUG;

ARTICLE; BINDING AFFINITY; CHROMATIN IMMUNOPRECIPITATION; CONTROLLED STUDY; DNA BINDING; GEL MOBILITY SHIFT ASSAY; NONHUMAN; PRIORITY JOURNAL; PROTEIN BINDING; PROTEIN FUNCTION; PROTEIN INTERACTION; TELOMERE;

BASE SEQUENCE; CHROMATIN IMMUNOPRECIPITATION; DNA PRIMERS; DNA-BINDING PROTEINS; ELECTROPHORETIC MOBILITY SHIFT ASSAY; PROTEIN BINDING; RECOMBINANT PROTEINS; RIBONUCLEOPROTEINS, SMALL NUCLEOLAR; RIBOSOMAL PROTEINS; SACCHAROMYCES CEREVISIAE; SACCHAROMYCES CEREVISIAE PROTEINS; TELOMERE; TWO-HYBRID SYSTEM TECHNIQUES;

VERTEBRATA;

EID: 37549012958     PISSN: 02646021     EISSN: None     Source Type: Journal    
DOI: 10.1042/BJ20070968     Document Type: Article

References (47)

1. Cech, T. R. (2004) Beginning to understand the end of the chromosome. Cell 116, 273-279
2. Zakian, V. A. (1995) Telomeres: beginning to understand the end. Science 270, 1601-1607
3. Greider, C. W. and Blackburn, E. H. (1985) Identification of a specific telomere terminal transferase activity in Tetrahymena extracts. Cell 43, 405-413
4. Ferreira, M. G., Miller, K. M. and Cooper, J. P. (2004) Indecent exposure: when telomeres become uncapped. Mol. Cell 13, 7-16
5. 2/M cell cycle arrest in Saccharomyces cerevisiae. J. Biol. Chem. 278, 9318-9321
6. Wellinger, R. J., Ethier, K., Labrecque, P. and Zakian, V. A. (1996) Evidence for a new step in telomere maintenance. Cell 85, 423-433
7. Conrad, M. N., Wright, J. H., Wolf, A. J. and Zakian, V. A. (1990) RAP1 protein interacts with yeast telomeres in vivo: overproduction alters telomere structure and decreases chromosome stability. Cell 63, 739-750
8. Lustig, A. J., Kurtz, S. and Shore, D. (1990) Involvement of the silencer and UAS binding protein RAP1 in regulation of telomere length. Science 250, 549-553
9. Nugent, C. I., Hughes, T. R., Lue, N. F. and Lundblad, V. (1996) Cdc13p: a single-strand telomeric DNA-binding protein with a dual role in yeast telomere maintenance. Science 274, 249-252
10. 1-3 telomeric DNA-binding protein in vitro that affects telomere behavior in vivo. Proc. Natl. Acad. Sci. U.S.A. 93, 13760-13765
11. Grandin, N., Reed, S. I. and Charbonneau, M. (1997) Stn1, a new Saccharomyces cerevisiae protein, is implicated in telomere size regulation in association with Cdc13. Genes Dev. 11, 512-527
12. Grandin, N., Damon, C. and Charbonneau, M. (2001) Ten1 functions in telomere end protection and length regulation in association with Stn1 and Cdc13. EMBO J. 20, 1173-1183
13. Evans, S. K. and Lundblad, V. (1999) Est1 and Cdc13 as comediators of telomerase access. Science 286, 117-120
14. Qi, H. and Zakian, V. A. (2000) The Saccharomyces telomere-binding protein Cdc13p interacts with both the catalytic subunit of DNA polymerase α and the telomerase-associated Est1 protein. Genes Dev. 14, 1777-1788
15. Hsu, C.-L., Chen, Y.-S., Tsai, S.-Y., Tu, P.-J., Wang, M.-J. and Lin, J.-J. (2004) Interaction of Saccharomyces Cdc13p with Pol1p, Imp4p, Sir4p, and Zds2p is involved in telomere replication, telomere maintenance and cell growth control. Nucleic Acids Res. 32, 511-521
16. Virta-Pearlman, V., Morris, D. K. and Lundblad, V. (1996) Est1 has the properties of a single-stranded telomere end-binding protein. Genes Dev. 10, 3094-3104
17. n single strand telomeric DNA in vitro. Nucleic Acids Res. 22, 4906-4913
18. Konkel, L. M. C., Enomoto, S., Chamberlain, E. M., McCune-Zierath, P., Iyadurai, S. J. P. and Berman, J. (1995) A class of single-stranded telomeric DNA-binding proteins required for Rap1p localization in yeast nuclei. Proc. Natl. Acad. Sci. U.S.A. 92, 5558-5562
19. Schramke, V., Luciano, P., Brevet, V., Guillot, S., Corda, Y., Longhese, M. P., Gilson, E. and Geli, V. (2004) RPA regulates telomerase action by providing Est1p access to chromosome ends. Nat. Genet. 36, 46-54
20. Roy, N. and Runge, K. W. (1999) The ZDS1 and ZDS2 proteins require the Sir3p component of yeast silent chromatin to enhance the stability of short linear centromeric plasmids. Chromosoma 108, 146-161
21. Aparicio, O. M., Billington, B. L. and Gottschling, D. E. (1991) Modifiers of position effect are shared between telomeric and silent mating-type loci in S. cerevisiae. Cell 66, 1279-1287
22. Dragon, F., Gallagher, J. E. G., Compagnone-Post, P. A., Mitchell, B. M., Porwancher, K. A., Wehner, K. A., Wormsley, S., Settlage, R. E., Shabanowitz, J., Beyer, A. L. et al. (2002) A large nucleolar U3 ribonucleoprotein required for 18S ribosomal RNA biogenesis. Nature 417, 967-970
23. Venema, J. and Tollervey, D. (1999) Ribosome synthesis in Saccharomyces cerevisiae. Annu. Rev. Genet. 33, 261-311
24. Lee, S. J. and Baserga, S. J. (1999) Imp3p and Imp4p, two specific components of the U3 small nucleolar ribonucleoprotein that are essential for pre-18S rRNA processing. Mol. Cell. Biol. 19, 5441-5452
25. Granneman, S., Gallagher, J. E. G., Vogelzangs, J., Horstman, W., van Venrooij, W. J., Baserga, S. J. and Pruijn, G. J. M. (2003) The human Imp3 and Imp4 proteins form a ternary complex with hMpp10, which only interacts with the U3 snoRNA in 60-80S ribonucleoprotein complexes. Nucleic Acids Res. 31, 1877-1887
26. Wormsley, S., Samarsky, D. A., Fournier, M. J. and Baserga, S. J. (2001) An unexpected, conserved element of the U3 snoRNA is required for Mpp10p association. RNA 7, 904-919
27. Wehner, K. A., Gallagher, J. E. G. and Baserga, S. J. (2002) Components of an interdependent unit within the SSU processome regulate and mediate its activity. Mol. Cell. Biol. 22, 7258-7267
28. Gerczei, T. and Correll, C. C. (2004) Imp3p and Imp4p mediate formation of essential U3-precursor rRNA (pre-rRNA) duplexes, possibly to recruit the small subunit processome to the pre-rRNA. Proc. Natl. Acad. Sci. U.S.A. 101, 15301-15306
29. Eisenhaber, F., Wechsellberger, C. and Kreil, G. (2001) The Brix domain protein family: a key to the ribosomal biogenesis pathway? Trends Biochem. Sci. 26, 345-347
30. Ng, C. L., Waterman, D., Koonin, E. V., Antson, A. A. and Ortiz-Lombardia, M. (2005) Crystal structure of Mil (Mth680): internal duplication and similarity between the Imp4/Brix domain and the anticodon-binding domain of class IIa aminoacyl-tRNA synthetase. EMBO Rep. 6, 140-146
31. 70-like motif: a eukaryotic RNA binding domain unique to a superfamily of proteins required for ribosome biogenesis. Mol. Cell 9, 329-339
32. Baumann, P. and Cech, T. R. (2001) Pot1, the putative telomere end-binding protein in fission yeast and humans. Science 292, 1171-1175
33. Sikorski, R. S. and Hieter, P. (1989) A system of shuttle vectors and yeast host strains designed for efficient manipulation of DNA in Saccharomyces cerevisiae. Genetics 122, 19-27
34. Taggart, A. K. P., Teng, S.-C. and Zakian, V. A. (2002) Est1p as a cell cycle-regulated activator of telomere-bound telomerase. Science 297, 1023-1026
35. n. Nucleic Acids Res. 20, 6461-6464
36. n. Mol. Cell. Biol. 13, 4301-4310
37. Larrivee, M., LeBel, C. and Wellinger, R. J. (2004) The generation of proper constitutive G-tails on yeast telomeres is dependent on the MRX complex. Genes Dev. 18, 1391-1396
38. 1-3 tails late in S phase. Cell 72, 51-60
39. Gottschling, D. E. and Zakian, V. A. (1986) Telomere proteins: specific recognition and protection of the natural termini of Oxytricha macronuclear DNA. Cell 47, 195-205
40. Lin, Y.-C., Hsu, C.-L., Shih, J.-W. and Lin, J.-J. (2001) Specific binding of single-stranded telomeric DNA by Cdc13p of Saccharomyces cerevisiae. J. Biol. Chem. 276, 24588-24593
41. Fang, G., Gray, J. T. and Cech, T. R. (1993) Oxytricha telomere-binding protein: separable DNA-binding and dimerization domains of the α-subunif. Genes Dev. 7, 870-882
42. Fang, G. and Cech, T. R. (1993) Oxytricha telomere-binding protein: DNA-dependent dirnerization of the α and β subunits. Proc. Natl. Acad. Sci. U.S.A. 90, 6056-6060
43. Gao, H., Cervantes, R. B., Mandell, E. K., Otero, J. H. and Lundblad, V. (2007) RPA-like proteins mediate yeast telomere function. Nat. Struct. Mol. Biol. 14, 208-214
44. Ford, L. P., Wright, W. E. and Shay, J. W. (2002) A model for heterogeneous nuclear ribonucleoproteins in telomere and telomerase regulation. Oncogene 21, 580-583
45. Seto, A. G., Zaug, A. J., Sobel, S. G., Wolin, S. L. and Cech, T. R. (1999) Saccharomyces cerevisiae telomerase is an Sm small nuclear ribonucleoprotein particle. Nature 401, 177-180
46. LaBranche, H., Dupuis, S., Ben-Davis, Y., Bani, M.-R., Wellinger, R. J. and Chabot, B. (2001) Telomere elongation by hnRNP A1 and a derivative that interacts with telomeric repeats and telomerase. Nat. Genet. 19, 199-202
47. Zhang, Q.-S., Manche, L., Xu, R.-M. and Krainer, A. R. (2006) hnRNP A1 associates with telomere ends and stimulates telomerase activity. RNA 12, 1116-1128