-
1
-
-
0035920119
-
Escherichia coli CreBC is a global regulator of gene expression that responds to growth in minimal media
-
Avison, M. B., R. E. Horton, T. R. Walsh, and P. M. Bennett. 2001. Escherichia coli CreBC is a global regulator of gene expression that responds to growth in minimal media. J. Biol. Chem. 276:26955-26961.
-
(2001)
J. Biol. Chem
, vol.276
, pp. 26955-26961
-
-
Avison, M.B.1
Horton, R.E.2
Walsh, T.R.3
Bennett, P.M.4
-
2
-
-
7744226739
-
Increased motility of Escherichia coli by insertion sequence element integration into the regulatory region of the flhD operon
-
Barker, C. S., B. M. Prüss, and P. Matsumura. 2004. Increased motility of Escherichia coli by insertion sequence element integration into the regulatory region of the flhD operon. J. Bacteriol. 186:7529-7537.
-
(2004)
J. Bacteriol
, vol.186
, pp. 7529-7537
-
-
Barker, C.S.1
Prüss, B.M.2
Matsumura, P.3
-
3
-
-
37449030303
-
A comparison of Shiga-toxin negative Escherichia coli O157 aflagellate and intimin deficient mutants in porcine in vitro and in vivo models of infection
-
Best, A., R. M. La Reggione, D. Clifford, W. A. Cooley, A. R. Sayers, and M. J. Woodward. 2006. A comparison of Shiga-toxin negative Escherichia coli O157 aflagellate and intimin deficient mutants in porcine in vitro and in vivo models of infection. Infect. Immun. 113:67-72.
-
(2006)
Infect. Immun
, vol.113
, pp. 67-72
-
-
Best, A.1
La Reggione, R.M.2
Clifford, D.3
Cooley, W.A.4
Sayers, A.R.5
Woodward, M.J.6
-
4
-
-
15544382099
-
Role for flagella but not intimin in the persistent infection of the gastrointestinal tissues of specific-pathogen-free chicks by Shiga toxin-negative Escherichia coli O157:H7
-
Best, A., R. M. La Reggione, A. R. Sayers, and M. J. Woodward. 2005. Role for flagella but not intimin in the persistent infection of the gastrointestinal tissues of specific-pathogen-free chicks by Shiga toxin-negative Escherichia coli O157:H7. Infect. Immun. 73:1836-1846.
-
(2005)
Infect. Immun
, vol.73
, pp. 1836-1846
-
-
Best, A.1
La Reggione, R.M.2
Sayers, A.R.3
Woodward, M.J.4
-
5
-
-
15444350252
-
The complete genome sequence of Escherichia coli K-12
-
Blattner, F. R., G. Plunkett III, C. A. Bloch, N. T. Perna, V. Burland, M. Riley, J. Collado-Vides, J. D. Glasner, C. K. Rode, G. F. Mayhew, J. Gregor, N. W. Davis, H. A. Kirkpatrick, M. A. Goeden, D. J. Rose, B. Mau, and Y. Shao. 1997. The complete genome sequence of Escherichia coli K-12. Science 277:1453-1474.
-
(1997)
Science
, vol.277
, pp. 1453-1474
-
-
Blattner, F.R.1
Plunkett III, G.2
Bloch, C.A.3
Perna, N.T.4
Burland, V.5
Riley, M.6
Collado-Vides, J.7
Glasner, J.D.8
Rode, C.K.9
Mayhew, G.F.10
Gregor, J.11
Davis, N.W.12
Kirkpatrick, H.A.13
Goeden, M.A.14
Rose, D.J.15
Mau, B.16
Shao, Y.17
-
6
-
-
0034911878
-
Phenotype microarrays for high-throughput phenotypic testing and assay of gene function
-
Bochner, B. R., P. Gadzinski, and E. Panomitros. 2001. Phenotype microarrays for high-throughput phenotypic testing and assay of gene function. Genome Res. 11:1246-1255.
-
(2001)
Genome Res
, vol.11
, pp. 1246-1255
-
-
Bochner, B.R.1
Gadzinski, P.2
Panomitros, E.3
-
7
-
-
33646184857
-
A reassessment of the FNR regulon and transcriptomics analysis of the effects of nitrate, nitrite, NarXL, and NarQP, as Escherichia coli K-12 adapts from aerobic to anaerobic growth
-
Constantinidou, C., J. L. Hobman, L. Griffiths, M. D. Patel, C. W. Penn, J. A. Cole, and T. W. Overton. 2006. A reassessment of the FNR regulon and transcriptomics analysis of the effects of nitrate, nitrite, NarXL, and NarQP, as Escherichia coli K-12 adapts from aerobic to anaerobic growth. J. Biol. Chem. 281:4802-4815.
-
(2006)
J. Biol. Chem
, vol.281
, pp. 4802-4815
-
-
Constantinidou, C.1
Hobman, J.L.2
Griffiths, L.3
Patel, M.D.4
Penn, C.W.5
Cole, J.A.6
Overton, T.W.7
-
8
-
-
0034612342
-
One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products
-
Datsenko, K., and B. L. Wanner. 2000. One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products. Proc. Natl. Acad. Sci. USA 97:6640-6645.
-
(2000)
Proc. Natl. Acad. Sci. USA
, vol.97
, pp. 6640-6645
-
-
Datsenko, K.1
Wanner, B.L.2
-
9
-
-
33646349988
-
The Escherichia coli O157 flagellar regulatory gene flhC and not the flagellin gene fliC impacts colonization of cattle
-
Dobbin, H. S., C. J. Hovde, C. J. Williams, and S. A. Minnich. 2006. The Escherichia coli O157 flagellar regulatory gene flhC and not the flagellin gene fliC impacts colonization of cattle. Infect. Immun. 74:2894-2905.
-
(2006)
Infect. Immun
, vol.74
, pp. 2894-2905
-
-
Dobbin, H.S.1
Hovde, C.J.2
Williams, C.J.3
Minnich, S.A.4
-
10
-
-
2942571207
-
Extensive genomic diversity in pathogenic Escherichia coli and Shigella strains revealed by comparative genomic hybridization microarray
-
Fukiya, S., H. Mizoguchi, T. Tobe, and H. Mori. 2004. Extensive genomic diversity in pathogenic Escherichia coli and Shigella strains revealed by comparative genomic hybridization microarray. J. Bacteriol. 186:3911-3921.
-
(2004)
J. Bacteriol
, vol.186
, pp. 3911-3921
-
-
Fukiya, S.1
Mizoguchi, H.2
Tobe, T.3
Mori, H.4
-
11
-
-
3843116530
-
Analysis of the genome structure of the nonpathogenic probiotic Escherichia coli strain Nissle 1917
-
Grozdanov, L., C. Raasch, J. Schulze, U. Sonnenborn, G. Gottschalk, J. Hacker, and U. Dobrindt. 2004. Analysis of the genome structure of the nonpathogenic probiotic Escherichia coli strain Nissle 1917. J. Bacteriol. 186:5432-5441.
-
(2004)
J. Bacteriol
, vol.186
, pp. 5432-5441
-
-
Grozdanov, L.1
Raasch, C.2
Schulze, J.3
Sonnenborn, U.4
Gottschalk, G.5
Hacker, J.6
Dobrindt, U.7
-
12
-
-
2442664712
-
Evolution of pathogenic Escherichia coli
-
M. S. Donnenberg ed, Academic Press, Inc, San Diego, CA
-
Johnson, J. 2002. Evolution of pathogenic Escherichia coli, p. 55-77. In M. S. Donnenberg (ed.), Escherichia coli: virulence mechanisms of a versatile pathogen. Academic Press, Inc., San Diego, CA.
-
(2002)
Escherichia coli: Virulence mechanisms of a versatile pathogen
, pp. 55-77
-
-
Johnson, J.1
-
13
-
-
0042890366
-
High-frequency secondary mutations after suicide-driven allelic exchange mutagenesis in extraintestinal pathogenic Escherichia coli
-
Johnson, J. R., H. A. Lockman, K. Owens, S. Jelacic, and P. I. Tarr. 2003. High-frequency secondary mutations after suicide-driven allelic exchange mutagenesis in extraintestinal pathogenic Escherichia coli. J. Bacteriol. 185: 5301-5305.
-
(2003)
J. Bacteriol
, vol.185
, pp. 5301-5305
-
-
Johnson, J.R.1
Lockman, H.A.2
Owens, K.3
Jelacic, S.4
Tarr, P.I.5
-
14
-
-
28444483927
-
Mouse intestine selects nonmotile flhDC mutants of Escherichia coli MG1655 with increased colonizing ability and better utilization of carbon sources
-
Leatham, M. P., S. J. Stevenson, E. J. Gauger, K. A. Krogfelt, J. J. Lins, T. L. Haddock, S. M. Autieri, T. Conway, and P. S. Cohen. 2005. Mouse intestine selects nonmotile flhDC mutants of Escherichia coli MG1655 with increased colonizing ability and better utilization of carbon sources. Infect. Immun. 73:8039-8049.
-
(2005)
Infect. Immun
, vol.73
, pp. 8039-8049
-
-
Leatham, M.P.1
Stevenson, S.J.2
Gauger, E.J.3
Krogfelt, K.A.4
Lins, J.J.5
Haddock, T.L.6
Autieri, S.M.7
Conway, T.8
Cohen, P.S.9
-
15
-
-
0028132187
-
The FlhD/FlhC complex, a transcriptional activator of the Escherichia coli flagellar class II operons
-
Liu, X., and P. Matsumura. 1994. The FlhD/FlhC complex, a transcriptional activator of the Escherichia coli flagellar class II operons. J. Bacteriol. 176: 7345-7351.
-
(1994)
J. Bacteriol
, vol.176
, pp. 7345-7351
-
-
Liu, X.1
Matsumura, P.2
-
16
-
-
0031924072
-
Use of bacteriophage λ recombination functions to promote gene replacement in Escherichia coli
-
Murphy, K. C. 1998. Use of bacteriophage λ recombination functions to promote gene replacement in Escherichia coli. J. Bacteriol. 180:2063-2071.
-
(1998)
J. Bacteriol
, vol.180
, pp. 2063-2071
-
-
Murphy, K.C.1
-
17
-
-
1942480531
-
Lambda Red-mediated recombinogenic engineering of enterohemorrhagic and enteropathogenic Escherichia coli
-
Murphy, K. C., and K. G. Campellone. 2003. Lambda Red-mediated recombinogenic engineering of enterohemorrhagic and enteropathogenic Escherichia coli. BMC Mol. Biol. 4:11.
-
(2003)
BMC Mol. Biol
, vol.4
, pp. 11
-
-
Murphy, K.C.1
Campellone, K.G.2
-
18
-
-
33847103119
-
Probing bactericidal mechanisms induced by cold atmospheric plasmas with Escherichia coli mutants
-
Perni, S., G. Sharma, J. L. Hobman, P. A. Lund, C. J. Kershaw, G. A. Hidalgo-Arroya, C. W. Penn, X. T. Deng, J. L. Walsh, and M. G. Kong. 2007. Probing bactericidal mechanisms induced by cold atmospheric plasmas with Escherichia coli mutants. Appl. Phys. Lett. 90:7392.
-
(2007)
Appl. Phys. Lett
, vol.90
, pp. 7392
-
-
Perni, S.1
Sharma, G.2
Hobman, J.L.3
Lund, P.A.4
Kershaw, C.J.5
Hidalgo-Arroya, G.A.6
Penn, C.W.7
Deng, X.T.8
Walsh, J.L.9
Kong, M.G.10
-
19
-
-
0037336121
-
Definition of the Escherichia coli MC4100 genome by use of a DNA array
-
Peters, J. E., T. E. Thate, and N. L. Craig. 2003. Definition of the Escherichia coli MC4100 genome by use of a DNA array. J. Bacteriol. 185:2017-2021.
-
(2003)
J. Bacteriol
, vol.185
, pp. 2017-2021
-
-
Peters, J.E.1
Thate, T.E.2
Craig, N.L.3
-
20
-
-
26444466741
-
Chromosomal duplications and cointegrates generated by the bacteriophage lambda Red system in Escherichia coli K-12
-
Poteete, A. R., A. C. Fenton, and A. Nadkarni. 2004. Chromosomal duplications and cointegrates generated by the bacteriophage lambda Red system in Escherichia coli K-12. BMC Mol. Biol. 5:22.
-
(2004)
BMC Mol. Biol
, vol.5
, pp. 22
-
-
Poteete, A.R.1
Fenton, A.C.2
Nadkarni, A.3
-
21
-
-
0036282739
-
Phage λ Red-mediated adaptive mutation
-
Poteete, A. R., H. R. Wang, and P. L. Foster. 2002. Phage λ Red-mediated adaptive mutation. J. Bacteriol. 184:3753-3755.
-
(2002)
J. Bacteriol
, vol.184
, pp. 3753-3755
-
-
Poteete, A.R.1
Wang, H.R.2
Foster, P.L.3
-
22
-
-
0037226537
-
FlhD/FlhC is a regulator of anaerobic respiration and the Entner-Doudoroff pathway through induction of the methyl-accepting Chemotaxis protein Aer
-
Prüss, B. M., J. W. Campbell, T. K. Van Dyck, C. Zhu, Y. Kogan, and P. Matsumura. 2003. FlhD/FlhC is a regulator of anaerobic respiration and the Entner-Doudoroff pathway through induction of the methyl-accepting Chemotaxis protein Aer. J. Bacteriol. 185:534-543.
-
(2003)
J. Bacteriol
, vol.185
, pp. 534-543
-
-
Prüss, B.M.1
Campbell, J.W.2
Van Dyck, T.K.3
Zhu, C.4
Kogan, Y.5
Matsumura, P.6
-
23
-
-
0004136246
-
-
2nd ed. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY
-
Sambrook, J., E. F. Fritsch, and T. Maniatis. 1989. Molecular cloning: a laboratory manual, 2nd ed. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
-
(1989)
Molecular cloning: A laboratory manual
-
-
Sambrook, J.1
Fritsch, E.F.2
Maniatis, T.3
-
24
-
-
0041335300
-
Physiological studies of Escherichia coli strain MG1655: Growth defects and apparent cross-regulation of gene expression
-
Soupene, E., W. C. van Heeswijk, J. Plumbridge, V. Stewart, D. Bertenthal, H. Lee, G. Prasad, O. Paliy, P. Charernnoppakul, and S. Kustu. 2003. Physiological studies of Escherichia coli strain MG1655: growth defects and apparent cross-regulation of gene expression. J. Bacteriol. 185:5611-5626.
-
(2003)
J. Bacteriol
, vol.185
, pp. 5611-5626
-
-
Soupene, E.1
van Heeswijk, W.C.2
Plumbridge, J.3
Stewart, V.4
Bertenthal, D.5
Lee, H.6
Prasad, G.7
Paliy, O.8
Charernnoppakul, P.9
Kustu, S.10
-
25
-
-
0032796421
-
Multiple control of flagellum biosynthesis in Escherichia coli: Role of H-NS protein and the cyclic AMP-catabolite activator protein complex in transcription of the flhDC master operon
-
Soutourina, O., A. Kolb, E. Krin, C. Laurent-Winter, S. Rimsky, A. Danchin, and P. Bertin. 1999. Multiple control of flagellum biosynthesis in Escherichia coli: role of H-NS protein and the cyclic AMP-catabolite activator protein complex in transcription of the flhDC master operon. J. Bacteriol. 181:7500-7508.
-
(1999)
J. Bacteriol
, vol.181
, pp. 7500-7508
-
-
Soutourina, O.1
Kolb, A.2
Krin, E.3
Laurent-Winter, C.4
Rimsky, S.5
Danchin, A.6
Bertin, P.7
-
26
-
-
14244251962
-
Evolution of genomic content in the stepwise emergence of Escherichia coli O157:H7
-
Wick, L. M., W. Qi, D. W. Lacher, and T. S. Whittam. 2005. Evolution of genomic content in the stepwise emergence of Escherichia coli O157:H7. J. Bacteriol. 187:1783-1791.
-
(2005)
J. Bacteriol
, vol.187
, pp. 1783-1791
-
-
Wick, L.M.1
Qi, W.2
Lacher, D.W.3
Whittam, T.S.4
-
27
-
-
0034705144
-
An efficient recombination system for chromosome engineering in Escherichia coli
-
Yu, D., H. M. Ellis, E.-C. Lee, N. A. Jenkins, N. G. Copeland, and D. L. Court. 2000. An efficient recombination system for chromosome engineering in Escherichia coli. Proc. Natl. Acad. Sci. USA 97:5978-5983.
-
(2000)
Proc. Natl. Acad. Sci. USA
, vol.97
, pp. 5978-5983
-
-
Yu, D.1
Ellis, H.M.2
Lee, E.-C.3
Jenkins, N.A.4
Copeland, N.G.5
Court, D.L.6
-
28
-
-
7444245668
-
Identification of the CRP regulon using in vitro and in vivo transcriptional profiling
-
Zheng, D., C. Constantinidou, J. L. Hobman, and S. D. Minchin. 2004. Identification of the CRP regulon using in vitro and in vivo transcriptional profiling. Nucleic Acids Res. 32:5874-5893.
-
(2004)
Nucleic Acids Res
, vol.32
, pp. 5874-5893
-
-
Zheng, D.1
Constantinidou, C.2
Hobman, J.L.3
Minchin, S.D.4
|