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Volumn 74, Issue 1, 2008, Pages 101-110

Re-identification of "Oscillatoria simplicissima" isolated from the Vaal River, South Africa, as Planktothrix pseudagardhii

Author keywords

16S rRNA; Cyanobacteria; Morphology; Oscillatoria sp.; Phylogeny; Planktothrix sp.

Indexed keywords

COMPARATIVE STUDY; CYANOBACTERIUM; DATABASE; IDENTIFICATION METHOD; MORPHOLOGY; PHYLOGENETICS; PHYLOGENY; RNA; TAXONOMY;

EID: 37249069928     PISSN: 02546299     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.sajb.2007.09.003     Document Type: Article
Times cited : (11)

References (53)
  • 1
    • 0000026049 scopus 로고
    • Modern approach to the classification system of cyanophytes 3. Oscillatoriales
    • Anagnostidis K., and Komárek J. Modern approach to the classification system of cyanophytes 3. Oscillatoriales. Archiv fur Hydrobiologie 80 (1988) 327-472
    • (1988) Archiv fur Hydrobiologie , vol.80 , pp. 327-472
    • Anagnostidis, K.1    Komárek, J.2
  • 2
    • 4043164886 scopus 로고    scopus 로고
    • Cyanobacteria and cyanobacterial toxins in three alkaline Rift V alley lakes of Kenya - Lakes Booria, Nakuru and Elmenteita
    • Ballot A., Krienitz L., Kotut K., Wiegand C., Metcalf J.S., Codd G.A., and Pflugmacher S. Cyanobacteria and cyanobacterial toxins in three alkaline Rift V alley lakes of Kenya - Lakes Booria, Nakuru and Elmenteita. Journal of Plankton Research 26 (2002) 925-935
    • (2002) Journal of Plankton Research , vol.26 , pp. 925-935
    • Ballot, A.1    Krienitz, L.2    Kotut, K.3    Wiegand, C.4    Metcalf, J.S.5    Codd, G.A.6    Pflugmacher, S.7
  • 3
    • 0032824141 scopus 로고    scopus 로고
    • The diversity of gas vesicle genes in Planktothrix rubescens from Lake Zurich
    • Beard S.J., Handley B.A., Hayes P.K., and Walsby A.E. The diversity of gas vesicle genes in Planktothrix rubescens from Lake Zurich. Microbiology 145 (1999) 2757-2768
    • (1999) Microbiology , vol.145 , pp. 2757-2768
    • Beard, S.J.1    Handley, B.A.2    Hayes, P.K.3    Walsby, A.E.4
  • 4
    • 0141856627 scopus 로고    scopus 로고
    • Dispersal and phylogenetic diversity of nonmarine picocyanobacteria, inferred from 16S rRNA gene and cpcBA-intergenic spacer sequence analyses
    • Crosbie N.D., Pockl M., and Weisse T. Dispersal and phylogenetic diversity of nonmarine picocyanobacteria, inferred from 16S rRNA gene and cpcBA-intergenic spacer sequence analyses. Applied and Environmental Microbiology 69 (2003) 5716-5721
    • (2003) Applied and Environmental Microbiology , vol.69 , pp. 5716-5721
    • Crosbie, N.D.1    Pockl, M.2    Weisse, T.3
  • 6
    • 0034523247 scopus 로고    scopus 로고
    • Judicial Commission of the International Committee on Systematic Bacteriology. IXth International (IUMS) Congress of Bacteriology and Applied Microbiology. Minutes of the Meetings, 14, 15 and 18 August 1999, Sydney, Australia
    • De Vos P., and Trüper H.G. Judicial Commission of the International Committee on Systematic Bacteriology. IXth International (IUMS) Congress of Bacteriology and Applied Microbiology. Minutes of the Meetings, 14, 15 and 18 August 1999, Sydney, Australia. International Journal of Systematic and Evolutionary Microbiology 50 (2000) 2239-2244
    • (2000) International Journal of Systematic and Evolutionary Microbiology , vol.50 , pp. 2239-2244
    • De Vos, P.1    Trüper, H.G.2
  • 7
    • 0002443465 scopus 로고
    • The Academy of Natural Sciences of Philadelphia, Pennsylvania
    • Drouet F. Classification of the Oscillatoriaceae (1968), The Academy of Natural Sciences of Philadelphia, Pennsylvania 370
    • (1968) Classification of the Oscillatoriaceae , pp. 370
    • Drouet, F.1
  • 8
    • 0037259888 scopus 로고    scopus 로고
    • Ecosystem-dependent adaptive radiations of picocyanobacteria inferred from 16S rRNA and ITS-1 sequence analysis
    • Ernst A., Becker S., Wollenzien U.I.A., and Postius C. Ecosystem-dependent adaptive radiations of picocyanobacteria inferred from 16S rRNA and ITS-1 sequence analysis. Microbiology 149 (2003) 217-228
    • (2003) Microbiology , vol.149 , pp. 217-228
    • Ernst, A.1    Becker, S.2    Wollenzien, U.I.A.3    Postius, C.4
  • 9
    • 0029661226 scopus 로고    scopus 로고
    • Enrichment culture and microscopy conceal diverse thermophilic Synechococcus populations in single hot spring microbial mat habitat
    • Ferris M.J., Ruff-Roberts A.L., Kopczynski E.D., Bateson M.M., and Ward D.M. Enrichment culture and microscopy conceal diverse thermophilic Synechococcus populations in single hot spring microbial mat habitat. Applied and Environmental Microbiology 62 (1996) 1045-1050
    • (1996) Applied and Environmental Microbiology , vol.62 , pp. 1045-1050
    • Ferris, M.J.1    Ruff-Roberts, A.L.2    Kopczynski, E.D.3    Bateson, M.M.4    Ward, D.M.5
  • 12
    • 0037545904 scopus 로고    scopus 로고
    • Clade-specific 16S ribosomal DNA oligonucleotides reveal the predominance of a single marine Synechococcus clade throughout a stratified water column in the Red Sea
    • Fuller N.J., Marie D., Partensky F., Vaulot D., Post A.F., and Scanlan D.J. Clade-specific 16S ribosomal DNA oligonucleotides reveal the predominance of a single marine Synechococcus clade throughout a stratified water column in the Red Sea. Applied and Environmental Microbiology 69 (2003) 2430-2443
    • (2003) Applied and Environmental Microbiology , vol.69 , pp. 2430-2443
    • Fuller, N.J.1    Marie, D.2    Partensky, F.3    Vaulot, D.4    Post, A.F.5    Scanlan, D.J.6
  • 13
    • 0029786916 scopus 로고    scopus 로고
    • Phenotypic and phylogenetic analyses show Microcoleus chthonoplastes to be a cosmopolitan cyanobacterium
    • Garcia-Pichel F., Prufert-Bebout L., and Muyzer G. Phenotypic and phylogenetic analyses show Microcoleus chthonoplastes to be a cosmopolitan cyanobacterium. Applied and Environmental Microbiology 62 (1996) 3284-3291
    • (1996) Applied and Environmental Microbiology , vol.62 , pp. 3284-3291
    • Garcia-Pichel, F.1    Prufert-Bebout, L.2    Muyzer, G.3
  • 14
    • 0031810473 scopus 로고    scopus 로고
    • The phylogeny of unicellular, extremely halotolerant cyanobacteria
    • Garcia-Pichel F., Nuebel U., and Muyzer G. The phylogeny of unicellular, extremely halotolerant cyanobacteria. Archives of Microbiology 169 (1998) 469-482
    • (1998) Archives of Microbiology , vol.169 , pp. 469-482
    • Garcia-Pichel, F.1    Nuebel, U.2    Muyzer, G.3
  • 18
    • 37249036594 scopus 로고    scopus 로고
    • Gomont, M.M., 1892. Monograpie des Oscillariées (Nostocacées homocystées). Annales des Sciences Naturelles. Botanique Seria 7 15, 263-368; 16, 91-264.
  • 19
    • 0035129623 scopus 로고    scopus 로고
    • Genetic diversity in two species of freshwater cyanobacteria, Planktothrix (Oscillatoria) rubescens and P. agardhii
    • Humbert J.F., and Le Berre B. Genetic diversity in two species of freshwater cyanobacteria, Planktothrix (Oscillatoria) rubescens and P. agardhii. Archiv fur Hydrobiologie 150 (2001) 197-206
    • (2001) Archiv fur Hydrobiologie , vol.150 , pp. 197-206
    • Humbert, J.F.1    Le Berre, B.2
  • 20
    • 2942694047 scopus 로고    scopus 로고
    • International Committee on Systematics of Prokaryotes Subcommittee on the taxonomy of phototrophic bacteria. Minutes of the Meetings, 27 August 2003, Tokyo, Japan
    • Imhoff J.F., and Madigan M.T. International Committee on Systematics of Prokaryotes Subcommittee on the taxonomy of phototrophic bacteria. Minutes of the Meetings, 27 August 2003, Tokyo, Japan. International Journal of Systematic and Evolutionary Microbiology 54 (2004) 1001-1003
    • (2004) International Journal of Systematic and Evolutionary Microbiology , vol.54 , pp. 1001-1003
    • Imhoff, J.F.1    Madigan, M.T.2
  • 21
    • 0030716462 scopus 로고    scopus 로고
    • Phylogenetic relationships of filamentous cyanobacterial taxa inferred from 16S rRNA sequence divergence
    • Ishida T., Yokota A., and Sugiyama J. Phylogenetic relationships of filamentous cyanobacterial taxa inferred from 16S rRNA sequence divergence. Journal of General and Applied Microbiology 43 (1997) 237-241
    • (1997) Journal of General and Applied Microbiology , vol.43 , pp. 237-241
    • Ishida, T.1    Yokota, A.2    Sugiyama, J.3
  • 22
    • 0035838536 scopus 로고    scopus 로고
    • Evidence for polyphyletic origin of the members of the orders of Oscillatoriales and Pleurocapsales as determined by 16S rDNA analysis
    • Ishida T., Watanabe M.M., Sugiyama J., and Yokota A. Evidence for polyphyletic origin of the members of the orders of Oscillatoriales and Pleurocapsales as determined by 16S rDNA analysis. FEMS Microbiology Letters 201 (2001) 79-82
    • (2001) FEMS Microbiology Letters , vol.201 , pp. 79-82
    • Ishida, T.1    Watanabe, M.M.2    Sugiyama, J.3    Yokota, A.4
  • 23
    • 37249068581 scopus 로고    scopus 로고
    • Janse van Vuuren, S., 2001. Environmental Variables and the development of phytoplankton assemblages in the Vaal River between the Rand Water Barrage and Balkfontein. PhD Thesis, PU for CHE, Potchefstroom, pp. 370.
  • 24
    • 5444265483 scopus 로고
    • Judicial Commission of the International Committee on Systematic Bacteriology. Minutes of the meeting, 5 September 1986, Manchester, United Kingdom
    • Jones D. Judicial Commission of the International Committee on Systematic Bacteriology. Minutes of the meeting, 5 September 1986, Manchester, United Kingdom. International Journal of Systematic Bacteriology 37 (1987) 85-87
    • (1987) International Journal of Systematic Bacteriology , vol.37 , pp. 85-87
    • Jones, D.1
  • 25
    • 37249056590 scopus 로고    scopus 로고
    • The modern classification of cyanoprokaryotes (Cyanobacteria)
    • Komárek J. The modern classification of cyanoprokaryotes (Cyanobacteria). Oceanological and Hydrobiological Studies 34 (2005) 5-17
    • (2005) Oceanological and Hydrobiological Studies , vol.34 , pp. 5-17
    • Komárek, J.1
  • 26
    • 37249020121 scopus 로고    scopus 로고
    • Kruskopf, M.M., 2002. Phosphatase activities of riverine phytoplankton in the Vaal river (South Africa), Physiological responses of nuisance species to different nutrient regimes. Ph.D. Thesis, PU for CHE, Potchefstroom, pp. 255.
  • 29
    • 0029050366 scopus 로고
    • Identification and phylogenetic analysis of toxigenic cyanobacteria by multiplex randomly amplified polymorphic DNA PCR
    • Neilan B.A. Identification and phylogenetic analysis of toxigenic cyanobacteria by multiplex randomly amplified polymorphic DNA PCR. Applied and Environmental Microbiology 61 (1995) 2286-2291
    • (1995) Applied and Environmental Microbiology , vol.61 , pp. 2286-2291
    • Neilan, B.A.1
  • 30
    • 0027932639 scopus 로고
    • Phylogenetic relationships among filamentous helical cyanobacteria investigated on the basis of 16S ribosomal RNA gene sequence analysis
    • Nelissen B., Wilmotte A., Neefs J.M., and De Wachter R. Phylogenetic relationships among filamentous helical cyanobacteria investigated on the basis of 16S ribosomal RNA gene sequence analysis. Systematic and Applied Microbiology 17 (1994) 206-210
    • (1994) Systematic and Applied Microbiology , vol.17 , pp. 206-210
    • Nelissen, B.1    Wilmotte, A.2    Neefs, J.M.3    De Wachter, R.4
  • 31
    • 0028863523 scopus 로고
    • An early origin of plastids within the cyanobacterial divergence is suggested by evolutionary trees based on complete 16S rRNA sequences
    • Nelissen B., Van de Peer Y., Wilmotte A., and De Wachter R. An early origin of plastids within the cyanobacterial divergence is suggested by evolutionary trees based on complete 16S rRNA sequences. Molecular Biology and Evolution 12 (1995) 1166-1173
    • (1995) Molecular Biology and Evolution , vol.12 , pp. 1166-1173
    • Nelissen, B.1    Van de Peer, Y.2    Wilmotte, A.3    De Wachter, R.4
  • 32
    • 0029878253 scopus 로고    scopus 로고
    • Phylogenetic relationship of nonaxenic filamentous cyanobacterial strains based on 16S rRNA sequence analysis
    • Nelissen B.J.M., De Baere R., Wilmotte A., and De Wachter R. Phylogenetic relationship of nonaxenic filamentous cyanobacterial strains based on 16S rRNA sequence analysis. Journal of Molecular Evolution 42 (1996) 194-200
    • (1996) Journal of Molecular Evolution , vol.42 , pp. 194-200
    • Nelissen, B.J.M.1    De Baere, R.2    Wilmotte, A.3    De Wachter, R.4
  • 33
    • 37249043277 scopus 로고    scopus 로고
    • Nixon, K.C., 2002. WinClada ver. 1.00.08 Published by the author, Ithaca, NY. (http://www.cladistics.com).
  • 35
    • 5444227627 scopus 로고    scopus 로고
    • A proposal for further integration of the cyanobacteria under the Bacteriological code
    • Oren A. A proposal for further integration of the cyanobacteria under the Bacteriological code. International Journal of Systematic and Evolutionary Microbiology 54 (2004) 1895-1902
    • (2004) International Journal of Systematic and Evolutionary Microbiology , vol.54 , pp. 1895-1902
    • Oren, A.1
  • 36
    • 37249069520 scopus 로고    scopus 로고
    • Nomenclature of the cyanophyta/cyanobacteria/cyanoprokaryotes under the International Code of Nomenclature of Procaryotes
    • Oren A., and Tindall B.J. Nomenclature of the cyanophyta/cyanobacteria/cyanoprokaryotes under the International Code of Nomenclature of Procaryotes. Algological Studies 117 (2005) 39-52
    • (2005) Algological Studies , vol.117 , pp. 39-52
    • Oren, A.1    Tindall, B.J.2
  • 38
    • 0030751308 scopus 로고    scopus 로고
    • Strain characterization and classification of oxyphotobacteria in clone cultures on the basis of 16S rRNA sequences from the variable regions V6, V7 and V8
    • Rudi K., Skulberg O.M., Larsen F., and Jakobsen K.S. Strain characterization and classification of oxyphotobacteria in clone cultures on the basis of 16S rRNA sequences from the variable regions V6, V7 and V8. Applied and Environmental Microbiology 63 (1997) 2593-2599
    • (1997) Applied and Environmental Microbiology , vol.63 , pp. 2593-2599
    • Rudi, K.1    Skulberg, O.M.2    Larsen, F.3    Jakobsen, K.S.4
  • 39
    • 0031801745 scopus 로고    scopus 로고
    • Evolution of cyanobacteria by exchange of genetic material among phyletically related strains
    • Rudi K., Skulberg O.M., and Jakobsen K.S. Evolution of cyanobacteria by exchange of genetic material among phyletically related strains. Journal of Bacteriology 180 (1998) 3453-3461
    • (1998) Journal of Bacteriology , vol.180 , pp. 3453-3461
    • Rudi, K.1    Skulberg, O.M.2    Jakobsen, K.S.3
  • 40
    • 0025860931 scopus 로고
    • Analysis of a marine picoplankton community by 16S rRNA gene cloning and sequencing
    • Schmidt T.M., DeLong E.F., and Pace N.R. Analysis of a marine picoplankton community by 16S rRNA gene cloning and sequencing. Journal of Bacteriology 173 (1991) 4371-4378
    • (1991) Journal of Bacteriology , vol.173 , pp. 4371-4378
    • Schmidt, T.M.1    DeLong, E.F.2    Pace, N.R.3
  • 41
    • 0028028182 scopus 로고
    • Taxonomic note: a place for DNA-DNA reassociation and 16S rRNA sequence analysis in the present species definition in bacteriology
    • Stackebrandt E., and Goebel B.M. Taxonomic note: a place for DNA-DNA reassociation and 16S rRNA sequence analysis in the present species definition in bacteriology. International Journal of Systematic Bacteriology 44 (1994) 846-849
    • (1994) International Journal of Systematic Bacteriology , vol.44 , pp. 846-849
    • Stackebrandt, E.1    Goebel, B.M.2
  • 42
    • 0003891310 scopus 로고
    • Spirulina und Arthrospira (nov. gen.)
    • Stizenberger E. Spirulina und Arthrospira (nov. gen.). Hedwigia 1 (1852) 32-34
    • (1852) Hedwigia , vol.1 , pp. 32-34
    • Stizenberger, E.1
  • 44
    • 37249036592 scopus 로고
    • Itämeressä esiintyvät myrkylliset sini-ja panssarisiimalevät
    • (in Finnish)
    • Tanskanen S. Itämeressä esiintyvät myrkylliset sini-ja panssarisiimalevät. Meri 18 (1990) 1-45 (in Finnish)
    • (1990) Meri , vol.18 , pp. 1-45
    • Tanskanen, S.1
  • 45
    • 0141606930 scopus 로고    scopus 로고
    • Cyanobacterial diversity in natural and artificial microbial mats of lake Fryxell (McMurdo dry valleys, Antarctica): a morphological and molecular approach
    • Taton A., Grubisic S., Brambilla E., De Wit R., and Wilmotte A. Cyanobacterial diversity in natural and artificial microbial mats of lake Fryxell (McMurdo dry valleys, Antarctica): a morphological and molecular approach. Applied and Environmental Microbiology 69 (2003) 5157-5169
    • (2003) Applied and Environmental Microbiology , vol.69 , pp. 5157-5169
    • Taton, A.1    Grubisic, S.2    Brambilla, E.3    De Wit, R.4    Wilmotte, A.5
  • 46
    • 5444269731 scopus 로고
    • International Committee on Systematic Bacteriology subcommittee on the taxonomy of phototrophic bacteria. Minutes of the discussion workshop: taxonomy of cyanobacteria, 17 to 19 June 1985, Paris, France
    • Trüper H.G. International Committee on Systematic Bacteriology subcommittee on the taxonomy of phototrophic bacteria. Minutes of the discussion workshop: taxonomy of cyanobacteria, 17 to 19 June 1985, Paris, France. International Journal of Systematic Bacteriology 36 (1986) 114-115
    • (1986) International Journal of Systematic Bacteriology , vol.36 , pp. 114-115
    • Trüper, H.G.1
  • 47
    • 0033166540 scopus 로고    scopus 로고
    • Investigating deep phylogenetic relationships among cyanobacteria and plastids by small subunit rRNA sequence analysis
    • Turner S., Pryer K.M., Miao V.P., and Palmer J.D. Investigating deep phylogenetic relationships among cyanobacteria and plastids by small subunit rRNA sequence analysis. Journal of Eukaryotic Microbiology 46 (1999) 327-338
    • (1999) Journal of Eukaryotic Microbiology , vol.46 , pp. 327-338
    • Turner, S.1    Pryer, K.M.2    Miao, V.P.3    Palmer, J.D.4
  • 49
    • 37249049382 scopus 로고    scopus 로고
    • Venter, A., 2000. The physiological characteristics of Oscillatoria simplicissima. PhD dissertation. Potchefstroom University, South Africa, pp. 140.
  • 50
    • 0037279225 scopus 로고    scopus 로고
    • Oscillatoria simplicissima: a taxonomical study
    • Venter A., Jordaan A., and Pieterse A.J.H. Oscillatoria simplicissima: a taxonomical study. Water S.A. 29 (2003) 101-104
    • (2003) Water S.A. , vol.29 , pp. 101-104
    • Venter, A.1    Jordaan, A.2    Pieterse, A.J.H.3
  • 51
    • 84989656710 scopus 로고
    • Taxonomic study of marine Oscillatoriacean strains (cyanobacteria) with narrow trichomes. II. Nucleotide sequence analysis of the 16S ribosomal RNA
    • Wilmotte A., Turner S., Van de Peer Y., and Pace N.R. Taxonomic study of marine Oscillatoriacean strains (cyanobacteria) with narrow trichomes. II. Nucleotide sequence analysis of the 16S ribosomal RNA. Journal of Phycology 28 (1992) 828-838
    • (1992) Journal of Phycology , vol.28 , pp. 828-838
    • Wilmotte, A.1    Turner, S.2    Van de Peer, Y.3    Pace, N.R.4
  • 52
    • 0027509645 scopus 로고
    • Structure of the 16S ribosomal RNA of the thermophilic cyanobacterium Chlorogloeopsis HTF ('Mastigocladus laminosus HTF') strain PCC7518, and phylogenetic analysis
    • Wilmotte A., Van der Auwera G., and De Wachter R. Structure of the 16S ribosomal RNA of the thermophilic cyanobacterium Chlorogloeopsis HTF ('Mastigocladus laminosus HTF') strain PCC7518, and phylogenetic analysis. FEBS Letters 317 (1993) 96-100
    • (1993) FEBS Letters , vol.317 , pp. 96-100
    • Wilmotte, A.1    Van der Auwera, G.2    De Wachter, R.3


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