메뉴 건너뛰기




Volumn 63, Issue 7, 1997, Pages 2593-2599

Strain characterization and classification of oxyphotobacteria in clone cultures on the basis of 16S rRNA sequences from the variable regions V6, V7, and V8

Author keywords

[No Author keywords available]

Indexed keywords

RIBOSOME RNA;

EID: 0030751308     PISSN: 00992240     EISSN: None     Source Type: Journal    
DOI: 10.1128/aem.63.7.2593-2599.1997     Document Type: Article
Times cited : (168)

References (38)
  • 1
    • 0018484422 scopus 로고
    • Cyanobacterial evolution: Results of 16S ribosomal rihonucleic acid sequence analyses
    • Bonen, L., W. F. Doolittle, and G. E. Fox. 1979. Cyanobacterial evolution: results of 16S ribosomal rihonucleic acid sequence analyses. Can. J. Biochem. 57:879-888.
    • (1979) Can. J. Biochem. , vol.57 , pp. 879-888
    • Bonen, L.1    Doolittle, W.F.2    Fox, G.E.3
  • 2
    • 1842362290 scopus 로고
    • Complete nucleotide sequence of a 16S ribosomal RNA gene from Escherichia coli
    • Brosius, J., M. L. Palmer, P. J. Kennedy, and H. F. Noller. 1978. Complete nucleotide sequence of a 16S ribosomal RNA gene from Escherichia coli. Proc. Natl. Acad. Sci. USA 57:4801-4805.
    • (1978) Proc. Natl. Acad. Sci. USA , vol.57 , pp. 4801-4805
    • Brosius, J.1    Palmer, M.L.2    Kennedy, P.J.3    Noller, H.F.4
  • 3
    • 0000102730 scopus 로고
    • Group I. Cyanobacteria
    • J. T. Staley, M. P. Bryant, N. Pfenning, and J. G. Holt (ed.), Williams and Wilkins Co., Baltimore, Md.
    • Castenholz, R. W., and J. B. Waterbury. 1989. Group I. Cyanobacteria, p. 1710-1728. In J. T. Staley, M. P. Bryant, N. Pfenning, and J. G. Holt (ed.), Bergey's manual of systematic bacteriology, vol. 3. Williams and Wilkins Co., Baltimore, Md.
    • (1989) Bergey's Manual of Systematic Bacteriology , vol.3 , pp. 1710-1728
    • Castenholz, R.W.1    Waterbury, J.B.2
  • 4
    • 0030941135 scopus 로고    scopus 로고
    • Rapid isolation of PCR-ready DNA from blood, bone marrow and cultured cells, based on paramagnetic beads
    • Deggerdal, A., and F. Larsen. 1997. Rapid isolation of PCR-ready DNA from blood, bone marrow and cultured cells, based on paramagnetic beads. BioTechniques 22:554-557.
    • (1997) BioTechniques , vol.22 , pp. 554-557
    • Deggerdal, A.1    Larsen, F.2
  • 5
    • 0000461280 scopus 로고
    • Confidence limits on phylogenies: An approach using the bootstrap
    • Felsenstein, J. 1985. Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39:783-791.
    • (1985) Evolution , vol.39 , pp. 783-791
    • Felsenstein, J.1
  • 6
    • 0002918460 scopus 로고
    • On the problem of discovering the most parsimonious tree
    • Fitch, W. M. 1977. On the problem of discovering the most parsimonious tree. Am. Nat. 111:223-257.
    • (1977) Am. Nat. , vol.111 , pp. 223-257
    • Fitch, W.M.1
  • 7
    • 0003365715 scopus 로고
    • Cyanophyceae
    • L. Rabenhorst (ed.), Akad. Verlagesell. Leipzig, Germany
    • Geitler, L. 1932. Cyanophyceae, p. 1-1, 196. In L. Rabenhorst (ed.), Kryptogamenflora, vol. 14. Akad. Verlagesell. Leipzig, Germany.
    • (1932) Kryptogamenflora , vol.14 , pp. 1-1
    • Geitler, L.1
  • 10
    • 0021770785 scopus 로고
    • On the evolutionary descent of organisms and organelles: A global phylogeny based on a highly conserved structural core in small subunit ribosomal RNA
    • Gray, M. W., D. Sankoff, and R. J. Cedergren. 1984. On the evolutionary descent of organisms and organelles: a global phylogeny based on a highly conserved structural core in small subunit ribosomal RNA. Nucleic Acids Res. 12:5837-5852.
    • (1984) Nucleic Acids Res. , vol.12 , pp. 5837-5852
    • Gray, M.W.1    Sankoff, D.2    Cedergren, R.J.3
  • 11
    • 0024598146 scopus 로고
    • Fast and sensitive multiple sequence alignments on a microcomputer
    • Higgins, D. G., and P. M. Sharp. 1989. Fast and sensitive multiple sequence alignments on a microcomputer. CABIOS 5:151-153.
    • (1989) CABIOS , vol.5 , pp. 151-153
    • Higgins, D.G.1    Sharp, P.M.2
  • 12
    • 0024342726 scopus 로고
    • Direct solid phase sequencing of genomic and plastid DNA using magnetic beads as solid support
    • Hultman, T., S. Ståhl, E. Hornes, and M. Uhlén. 1989. Direct solid phase sequencing of genomic and plastid DNA using magnetic beads as solid support. Nucleic Acids Res. 17:4937-4946.
    • (1989) Nucleic Acids Res. , vol.17 , pp. 4937-4946
    • Hultman, T.1    Ståhl, S.2    Hornes, E.3    Uhlén, M.4
  • 13
    • 0019296687 scopus 로고
    • A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences
    • Kimura, M. 1980. A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J. Mol. Evol. 16:111-120.
    • (1980) J. Mol. Evol. , vol.16 , pp. 111-120
    • Kimura, M.1
  • 14
    • 0001385420 scopus 로고
    • Modern approach to the classification system of cyanophytes 4 - Nostocales
    • Komárek, J., and K. Anagnostidis. 1989. Modern approach to the classification system of cyanophytes 4 - Nostocales. Arch. Hydrobiol Suppl. 82,3 Algol. Stud. 56:247-345.
    • (1989) Arch. Hydrobiol Suppl. 82,3 Algol. Stud. , vol.56 , pp. 247-345
    • Komárek, J.1    Anagnostidis, K.2
  • 16
    • 0002453157 scopus 로고
    • Prochlorophytes: The "other" cyanobacteria?
    • D. A. Bryant (ed.), Kluwer Academic Publisher, Dordrecht, The Netherlands
    • Matthijs, H. C. P., G. N. W. van der Staay, and L. R. Mur. 1994. Prochlorophytes: the "other" cyanobacteria?, p. 49-64. In D. A. Bryant (ed.), The molecular biology of cyanobacteria. Kluwer Academic Publisher, Dordrecht, The Netherlands.
    • (1994) The Molecular Biology of Cyanobacteria , pp. 49-64
    • Matthijs, H.C.P.1    Van Der Staay, G.N.W.2    Mur, L.R.3
  • 18
    • 0027932639 scopus 로고
    • Phylogenetic relationships among filamentous helical cyanobacteria investigated on the basis of 16S ribosomal RNA gene sequence analysis
    • Nelissen, B., A. Wilmotte, J. M. Neefs, and R. De Wachter. 1994. Phylogenetic relationships among filamentous helical cyanobacteria investigated on the basis of 16S ribosomal RNA gene sequence analysis. Syst. Appl. Microbiol. 17:206-210.
    • (1994) Syst. Appl. Microbiol. , vol.17 , pp. 206-210
    • Nelissen, B.1    Wilmotte, A.2    Neefs, J.M.3    De Wachter, R.4
  • 19
    • 0028863523 scopus 로고
    • An early origin of plastids within the cyanobacterial divergence is suggested by evolutionary trees based on complete 16S rRNA sequences
    • Nelissen, B., Y. V. De Peer, A. Wilmotte, and R. De Wachter. 1995. An early origin of plastids within the cyanobacterial divergence is suggested by evolutionary trees based on complete 16S rRNA sequences. Mol. Biol. Evol. 12:1166-1173.
    • (1995) Mol. Biol. Evol. , vol.12 , pp. 1166-1173
    • Nelissen, B.1    De Peer, Y.V.2    Wilmotte, A.3    De Wachter, R.4
  • 20
    • 0029878253 scopus 로고    scopus 로고
    • Phylogenetic relationships of nonaxenic filamentous cyanobacterial strains based on 16S rRNA sequence analysis
    • Nelissen, B., R. De Baere, A. Wilmotte, and R. De Wachter. 1996. Phylogenetic relationships of nonaxenic filamentous cyanobacterial strains based on 16S rRNA sequence analysis. J. Mol. Evol. 42:194-200.
    • (1996) J. Mol. Evol. , vol.42 , pp. 194-200
    • Nelissen, B.1    De Baere, R.2    Wilmotte, A.3    De Wachter, R.4
  • 21
    • 0003863898 scopus 로고
    • Norwegian Institute for Water Research, Oslo, Norway
    • Norwegian Institute for Water Research. 1990. Culture collection of algae. Catalogue of strains. Norwegian Institute for Water Research, Oslo, Norway.
    • (1990) Culture Collection of Algae. Catalogue of Strains
  • 22
    • 0000129680 scopus 로고
    • Culturally induced variation in four morphologically diverse bluegreen algae
    • Pearson, J. E., and J. M. Kingsbury. 1966. Culturally induced variation in four morphologically diverse bluegreen algae. Am. J. Bot. 53:192-200.
    • (1966) Am. J. Bot. , vol.53 , pp. 192-200
    • Pearson, J.E.1    Kingsbury, J.M.2
  • 23
    • 0023989064 scopus 로고
    • Improved tools for biological sequence comparison
    • Pearson, W. R., and D. J. Lipman. 1988. Improved tools for biological sequence comparison. Proc. Natl. Acad. Sci. USA 85:2444-2448.
    • (1988) Proc. Natl. Acad. Sci. USA , vol.85 , pp. 2444-2448
    • Pearson, W.R.1    Lipman, D.J.2
  • 24
    • 0018409915 scopus 로고
    • Generic assignments, strain histories and properties of pure cultures of cyanobacteria
    • Rippka, R., J. Deruelles, J. B. Waterbury, M. Herdman, and R. Y. Stanier. 1979. Generic assignments, strain histories and properties of pure cultures of cyanobacteria. J. Gen. Microbiol. 111:1-61.
    • (1979) J. Gen. Microbiol. , vol.111 , pp. 1-61
    • Rippka, R.1    Deruelles, J.2    Waterbury, J.B.3    Herdman, M.4    Stanier, R.Y.5
  • 25
    • 0024202813 scopus 로고
    • Isolation and purification of cyanobacteria
    • Rippka, R. 1988. Isolation and purification of cyanobacteria. Methods Enzymol. 167:3-27.
    • (1988) Methods Enzymol. , vol.167 , pp. 3-27
    • Rippka, R.1
  • 28
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • Saitou, N., and M. Nei. 1987. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4:406-425.
    • (1987) Mol. Biol. Evol. , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 29
    • 0025860931 scopus 로고
    • Analysis of a marine picoplankton community by 16S rRNA gene cloning and sequencing
    • Schmidt, T. M., E. F. DeLong, and N. R. Pace. 1991. Analysis of a marine picoplankton community by 16S rRNA gene cloning and sequencing. J. Bacteriol. 173:4371-4378.
    • (1991) J. Bacteriol. , vol.173 , pp. 4371-4378
    • Schmidt, T.M.1    DeLong, E.F.2    Pace, N.R.3
  • 30
    • 0000832298 scopus 로고
    • Planktic species of Oscillatoria (Cyanophyceae) from Norway. Characterization and classilication
    • Skulberg, O. M., and R. Skulberg. 1985. Planktic species of Oscillatoria (Cyanophyceae) from Norway. Characterization and classilication. Arch. Hydrobiol. Suppl. 71 Algol. Stud. 38/39:157-174.
    • (1985) Arch. Hydrobiol. Suppl. 71 Algol. Stud. , vol.38-39 , pp. 157-174
    • Skulberg, O.M.1    Skulberg, R.2
  • 32
    • 0000010309 scopus 로고
    • Toxic waterblooms with cyanophytes in Norway - Current knowledge
    • Skulberg, O. M., B. Underdal, and H. Utkilen. 1994. Toxic waterblooms with cyanophytes in Norway - current knowledge. Algol. Stud. 75:279-289.
    • (1994) Algol. Stud. , vol.75 , pp. 279-289
    • Skulberg, O.M.1    Underdal, B.2    Utkilen, H.3
  • 33
    • 0001495645 scopus 로고    scopus 로고
    • Toxins produced by cyanophytes in Norwegian inland waters - Health and environment
    • J. Låg (ed.), The Norwegian Academy of Science and Letters, Oslo, Norway
    • Skulberg, O. M. 1996. Toxins produced by cyanophytes in Norwegian inland waters - health and environment, p. 197-216. In J. Låg (ed.), Chemical data as a basis of geomedical investigations. The Norwegian Academy of Science and Letters, Oslo, Norway.
    • (1996) Chemical Data as a Basis of Geomedical Investigations , pp. 197-216
    • Skulberg, O.M.1
  • 35
    • 0024978825 scopus 로고
    • The relationship of a prochlorophyte Prochlorothrix hollandica to green chloroplasts
    • Turner, S., T. Burger-Wiersma, S. J. Giovannoni, L. R. Mur, and N. R. Pace. 1989. The relationship of a prochlorophyte Prochlorothrix hollandica to green chloroplasts. Nature 337:380-382.
    • (1989) Nature , vol.337 , pp. 380-382
    • Turner, S.1    Burger-Wiersma, T.2    Giovannoni, S.J.3    Mur, L.R.4    Pace, N.R.5
  • 36
    • 0026610358 scopus 로고
    • Multiple evolutionary origins of prochlorophytes within the cyanobacterial radiation
    • Urbach, E., D. L. Robertson, and S. W. Chisholm. 1992. Multiple evolutionary origins of prochlorophytes within the cyanobacterial radiation. Nature 355:267-270.
    • (1992) Nature , vol.355 , pp. 267-270
    • Urbach, E.1    Robertson, D.L.2    Chisholm, S.W.3
  • 37
    • 0000408853 scopus 로고
    • Widespread occurrence of a unicellular, marine, planktonic, cyanobacterium
    • Waterbury, J. B., S. W. Watson, R. R. L. Guillard, and L. E. Brand. 1979. Widespread occurrence of a unicellular, marine, planktonic, cyanobacterium. Nature 277:293-294.
    • (1979) Nature , vol.277 , pp. 293-294
    • Waterbury, J.B.1    Watson, S.W.2    Guillard, R.R.L.3    Brand, L.E.4
  • 38
    • 0001945883 scopus 로고
    • Molecular evolution and taxonomy of the cyanobacteria
    • D. A. Bryant (ed.), Kluwer Academic Publisher, Dordrecht, The Netherlands
    • Wilmotte, A. 1994. Molecular evolution and taxonomy of the cyanobacteria, p. 1-25. In D. A. Bryant (ed.), The molecular biology of cyanobacteria. Kluwer Academic Publisher, Dordrecht, The Netherlands.
    • (1994) The Molecular Biology of Cyanobacteria , pp. 1-25
    • Wilmotte, A.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.