Adaptation of the "in-gel release method" to N-glycome analysis of low-milligram amounts of material

Electrophoresis

Volumn 28, Issue 23, 2007, Pages 4484-4492

  Rendić, Dubravko ^a   Wilson, Iain B H ^a   Lubec, Gert ^b   Gutternigg, Martin ^a   Altmann, Friedrich ^a   Léonard, Renaud ^a  

^a UNIVERSITY OF NATURAL RESOURCES AND LIFE SCIENCES   (Austria)

^b UNIV KLIN KINDER JUGENDHEILKUNDE   (Austria)

Author keywords

Glycome; Glycoprotein; In gel release; N glycan; SDS PAGE

Indexed keywords

AMINO ACIDS; CELL CULTURE; GLYCOSYLATION; PHYSIOLOGY; PLANTS (BOTANY); POLYSACCHARIDES; TISSUE;

CELL TYPES; GLYCOMES; IN-GEL RELEASE; N-GLYCAN; N-GLYCOSYLATION; PHYSIOLOGICAL ROLES; PHYSIOLOGICAL STATE; POST-TRANSLATIONAL MODIFICATIONS; RELEASE METHODS; SDS-PAGE;

PROTEINS;

BUFFER; GLYCAN; GLYCINE; TROMETAMOL;

ANALYTIC METHOD; ARABIDOPSIS; ARTICLE; CAENORHABDITIS ELEGANS; CONTROLLED STUDY; DROSOPHILA MELANOGASTER; IN GEL RELEASE METHOD; LEPIDOPTERA; POLYACRYLAMIDE GEL ELECTROPHORESIS; PROTEIN ANALYSIS; PROTEIN GLYCOSYLATION; PROTEIN PROCESSING; TOBACCO;

EID: 37149040344     PISSN: 01730835     EISSN: 15222683     Source Type: Journal    
DOI: 10.1002/elps.200700098     Document Type: Article

References (60)

1. Taniguchi, N., Honke, K., Fukuda, M. (Eds.), Handbook of Glycosyltransferases and Related Genes, Springer, Tokyo 2003.
2. Fabini, G., Freilinger, A., Altmann, F., Wilson, I. B. H., J. Biol. Chem. 2001, 276, 28058-28067.
3. Sarkar, M., Schachter, H., Biol. Chem. 2001, 382, 209-217.
4. Vadaie, N., Jarvis, D. L., J. Biol. Chem. 2004, 279, 33501-33518.
5. Rendic, D., Klaudiny, J., Stemmer, U., Schmidt, J. et al., Biochem. J. 2007, 402, 105-115.
6. Léonard, R., Rendic, D., Rabouille, C., Wilson, I. B. H. et al., J. Biol. Chem. 2006, 281, 4867-4875.
7. Jarvis, D. L., Bohimeyer, D. A., Liao, Y. F., Lomax, K. K. et al., Glycobiology 1997, 7, 113-127.
8. Kawar, Z., Herscovics, A., Jarvis, D. L., Glycobiology 1997, 7, 433-443.
9. Chen, S., Tan, J., Reinhold, V. N., Spence, A. M., Schachter, H., Biochim. Biophys. Acta 2002, 1573, 271-279.
10. Paschinger, K., Rendic, D., Lochnit, G., Jantsch, V., Wilson, I. B. H., J. Biol. Chem. 2004, 279, 49588-49598.
11. Paschinger, K., Staudacher, E., Stemmer, U., Fabini, G., Wilson, I. B. H., Glycobiology 2005, 15, 463-474.
12. Paschinger, K., Hackl, M., Gutternigg, M., Kretschmer Lubich, D. et al., J. Biol. Chem. 2006, 281, 28265-28277.
13. Warren, C. E., Krizius, A., Roy, P. J., Culotti, J. G., Dennis, J. W., J. Biol. Chem. 2002, 277, 22829-22838.
14. Kawar, Z., van Die, I., Cummings, R. D., J. Biol. Chem. 2002, 277, 34924-34932.
15. Wilson, I. B. H., Rendic, D., Dumic, J., Freilinger, A. et al., Biochim. Biophys. Acta 2001, 1527, 88-96.
16. Wilson, I. B. H., Glycoconj. J. 2001, 18, 439-447.
17. Strasser, R., Mucha, J., Mach, L., Altmann, F. et al., FEBS Lett. 2000, 472, 105-108.
18. Strasser, R., Steinkellner, H., Boren, M., Altmann, F. et al., Glycoconj. J. 1999, 16, 787-791.
19. Strasser, R., Schoberer, J., Jin, C., Glössl, J. et al., Plant J. 2006, 45, 789-803.
20. Bakker, H., Lommen, A., Jordi, W., Stiekema, W., Bosch, D., Biochem. Biophys. Res. Commun. 1997, 267, 829-832.
21. Teriete, R, Banerji, S., Noble, M., Blundell, C. D. et al., Mol. Cell 2004, 13, 483-496.
22. Wang, X., Inoue, S., Gu, J., Miyoshi, E. et al., Proc. Natl. Acad Sci. USA 2005, 102, 15791-15796.
23. Durbec, P., Cramer, H., Mol. Neurobiol. 2001, 24, 53-64.
24. Cousin, P., Dechaud, H., Grenot, C., Lejeune, H. et al., J. Steroid Biochem. Mol. Biol. 1999, 70, 115-121.
25. Aarnoudse, C. A., Garcia Vallejo, J. J., Saeland, E., van Kooyk, Y., Curr. Opin. Immunol. 2006, 18, 105-111.
26. Shields, R. L., Lai, J., Keck, R., O'Connell, L. Y. et al., J. Biol. Chem. 2002, 277, 26733-26740.
27. Ohtsubo, K., Marth, J. D., Cell 2006, 126, 855-867.
28. Freeze, H. H., Nat. Rev. Genet. 2006, 7, 537-551.
29. Wang, Y., Schachter, H., Marth, J. D., Biochim. Biophys. Acta 2002, 1573, 301-311.
30. Cromphout, K., Vieugels, W., Heykants, L., Schollen, E. et al., Mol. Cell. Biol. 2006, 26, 5621-5635.
31. Ishikawa, H. O., Higashi, S., Ayukawa, T, Sasamura, T. et al., Proc. Natl. Acad Sci. USA 2005, 102, 18532-18537.
32. Tremblay, L. O., Kovacs, E. N., Daniels, E., Wong, N. K. et al., J. Biol. Chem. 2007, 282, 2558-2566.
33. Wilson, I. B. H., Zeleny, R., Kolarich, D., Staudacher, E. et al., Glycobiology 2001, 11, 261-274.
34. Sutton-Smith, M., Morris, H. R., Dell, A., Tetrahedron Asymmetry 1999, 11, 363-369.
35. Geyer, H., Geyer, R., Biochim. Biophys. Acta 2006, 1764, 1853-1869.
36. Kang, P., Mechref, Y., Klouckova, I., Novotny, M. V., Rapid Commun. Mass Spectrom. 2005, 19, 3421-3428.
37. Kolarich, D., Altmann, F., Anal. Biochem. 2000, 285, 64-75.
38. Küster, B., Hunter, A. P., Wheeler, S. F., Dwek, R. A., ? D. J., Electrophoresis 1998, 19, 1950-1959.
39. Rendic, D., Linder, A., Paschinger, K., Borth, N. et al., J. Biol. Chem. 2006, 281, 3343-3353.
40. Worby, C. A., Simonson-Leff, N., Dixon, J. E., Sci. STKE2001, 2001, PL1.
41. Aoki, K., Perlman, M., Lim, J. M., Cantu, R. et al., J. Biol. Chem. 2007, 282, 9127-9142.
42. Sarkar, M., Leventis, P. A., Silvescu, C. I., Reinhold, V. N. et al., J. Biol. Chem. 2006, 281, 12776-12785.
43. Rayon, C., Cabanes-Macheteau, M., Loutelier-Bourhis, C., Salliot-Maire, I. et al., Plant Physiol. 1999, 119, 725-733.
44. Melo, N. S., Nimtz, M., Conradt, H. S., Fevereiro, P. S., Costa, J., FEBS Lett. 1997, 415, 186-191.
45. Fitchette-Lainé, A. C., Gomord, V., Cabanes, M., Michalski, J. C. et al., Plant J. 1997, 12, 1411-1417.
46. Joly, C., Leonard, R., Maftah, A., Riou-Khamlichi, C., J. Exp. Bot. 2002, 53, 1429-1436.
47. Léonard, R., Costa, G., Darrambide, E., Lhernould, S. et al., Glycobiology 2002, 12, 299-306.
48. North, S. J., Koles, K., Hembd, C., Morris, H. R. et al., Glycoconj. J. 2006, 23, 345-364.
49. Hsu, T. A., Takahashi, N., Tsukamoto, Y., Kato, K. et al., J. Biol. Chem. 1997, 272, 9062-9070.
50. Ailor, E., Takahashi, N., Tsukamoto, Y., Masuda, K. et al., Glycobiology 2000, 10, 837-847.
51. James, D. C., Freedman, R. B., Hoare, M., Ogonah, O. W. et al., Biotechnology (NY) 1995, 13, 592-596.
52. van Die, I., van Tetering, A., Bakker, H., van den Eijnden, D. H., Joziasse, D. H., Glycobiology 1996, 6, 157-164.
53. Haslam, S. M., Dell, A., Biochimie 2003, 85, 25-32.
54. Hanneman, A. J., Rosa, J. C., Ashline, D., Reinhold, V. N., Glycobiology 2006, 16, 874-890.
55. Comelli,E. M., Head, S. R., Gilmartin, T., Whisenant, T. et al., Glycobiology 2006, 16, 117-131.
56. Yu, S. Y., Wu, S. W., Khoo, K. H., Glycoconj. J. 2006, 23, 355-369.
57. Jan, L. Y., Jan, Y. N., Proc. Naatl. Acad. Sci. USA 1982, 79, 2700-2704.
58. Guerardel, Y., Chang, L. Y, Maes, E., Huang, C. J., Khoo, K. H., Glycobiology 2006, 16, 244-257.
59. Strasser, R., Bondili, J. S., Vavra, U., Schoberer, J. et al. Plant Cell 2007, 19, 2278-2292.
60. Barrows, B. D., Haslam, S. M., Bischof, L. J., Morris, H. R. et al. J. Biol. Chem. 2007, 282, 3302-3311.