메뉴 건너뛰기




Volumn 26, Issue 24, 2007, Pages 5048-5060

Tetrahymena ORC contains a ribosomal RNA fragment that participates in rDNA origin recognition

Author keywords

DNA replication; Gene amplification; Origin recognition complex; Ribonucleoprotein complex; Ribosomal RNA

Indexed keywords

ORIGIN RECOGNITION COMPLEX; PROTEIN; RIBOSOME DNA; RIBOSOME RNA; TYPE 1 ELEMENT BINDING FACTOR 4 PROTEIN; UNCLASSIFIED DRUG;

EID: 37149027964     PISSN: 02614189     EISSN: 14602075     Source Type: Journal    
DOI: 10.1038/sj.emboj.7601919     Document Type: Article
Times cited : (43)

References (42)
  • 2
    • 4444384150 scopus 로고    scopus 로고
    • The replicon revisited: An old model learns new tricks in metazoan chromosomes
    • Aladjem MI, Fanning E (2004) The replicon revisited: an old model learns new tricks in metazoan chromosomes. EMBO Rep 5: 686-691
    • (2004) EMBO Rep , vol.5 , pp. 686-691
    • Aladjem, M.I.1    Fanning, E.2
  • 3
    • 0347457073 scopus 로고    scopus 로고
    • Role for a Drosophila Myb-containing protein complex in site-specific DNA replication
    • Beall EL, Manak JR, Zhou S, Bell M, Lipsick JS, Botchan MR (2002) Role for a Drosophila Myb-containing protein complex in site-specific DNA replication. Nature 42: 833-837
    • (2002) Nature , vol.42 , pp. 833-837
    • Beall, E.L.1    Manak, J.R.2    Zhou, S.3    Bell, M.4    Lipsick, J.S.5    Botchan, M.R.6
  • 4
    • 0026607331 scopus 로고
    • ATP-dependent recognition of eukaryotic origins of DNA-replication by a multiprotein complex
    • Bell SP, Stillman B (1992) ATP-dependent recognition of eukaryotic origins of DNA-replication by a multiprotein complex. Nature 357: 128-134
    • (1992) Nature , vol.357 , pp. 128-134
    • Bell, S.P.1    Stillman, B.2
  • 5
    • 0032472223 scopus 로고    scopus 로고
    • Discrete start sites for DNA synthesis in the yeast ARS1 origin
    • Bielinsky AK, Gerbi SA (1998) Discrete start sites for DNA synthesis in the yeast ARS1 origin. Science 279: 95-98
    • (1998) Science , vol.279 , pp. 95-98
    • Bielinsky, A.K.1    Gerbi, S.A.2
  • 7
    • 33748667563 scopus 로고    scopus 로고
    • Functional requirement for noncoding Y RNAs form human chromosomal DNA replication
    • Christov CP, Gardiner TJ, Szuts D, Krude T (2007) Functional requirement for noncoding Y RNAs form human chromosomal DNA replication. Mol Cell Biol 26: 6993-7004
    • (2007) Mol Cell Biol , vol.26 , pp. 6993-7004
    • Christov, C.P.1    Gardiner, T.J.2    Szuts, D.3    Krude, T.4
  • 8
    • 12244265093 scopus 로고    scopus 로고
    • DNA replication origins in the Schizosaccharomyces pombe genome
    • Dai J, Chuang RY, Kelly TJ (2005) DNA replication origins in the Schizosaccharomyces pombe genome. Proc Natl Acad Sci USA 102: 337-342
    • (2005) Proc Natl Acad Sci USA , vol.102 , pp. 337-342
    • Dai, J.1    Chuang, R.Y.2    Kelly, T.J.3
  • 9
    • 0037188922 scopus 로고    scopus 로고
    • Yph1p, an ORC-interacting protein: Potential links between cell proliferation control, DNA replication, and ribosome biogenesis
    • Du YC, Stillman B (2002) Yph1p, an ORC-interacting protein: potential links between cell proliferation control, DNA replication, and ribosome biogenesis. Cell 109: 835-848
    • (2002) Cell , vol.109 , pp. 835-848
    • YC, D.1    Stillman, B.2
  • 10
    • 0032486089 scopus 로고    scopus 로고
    • Correlation of the expansion segments in mammalian rRNA with the fine structure of the 80 S ribosome; a cryoelectron microscopic reconstruction of the rabbit reticulocyte ribosome at 21 angstrom resolution
    • Dube P, Bacher G, Stark H, Mueller F, Zemlin F, van Heel M, Brimacombe R (1998) Correlation of the expansion segments in mammalian rRNA with the fine structure of the 80 S ribosome; a cryoelectron microscopic reconstruction of the rabbit reticulocyte ribosome at 21 angstrom resolution. J Mol Biol 279: 403-421
    • (1998) J Mol Biol , vol.279 , pp. 403-421
    • Dube, P.1    Bacher, G.2    Stark, H.3    Mueller, F.4    Zemlin, F.5    van Heel, M.6    Brimacombe, R.7
  • 11
    • 0025363256 scopus 로고
    • Comparison of primary and secondary 26S rRNA structures in two Tetrahymena species: Evidence for a strong evolutionary and structural constraint in expansion segments
    • Engberg J, Nielsen H, Lenaers G, Murayama O, Fujitani H, Higashinakagawa T (1990) Comparison of primary and secondary 26S rRNA structures in two Tetrahymena species: evidence for a strong evolutionary and structural constraint in expansion segments. J Mol Evol 6: 514-521
    • (1990) J Mol Evol , vol.6 , pp. 514-521
    • Engberg, J.1    Nielsen, H.2    Lenaers, G.3    Murayama, O.4    Fujitani, H.5    Higashinakagawa, T.6
  • 12
    • 0028293627 scopus 로고
    • Electroporation-mediated replacement of a positively and negatively selectable beta-tubulin gene in Tetrahymena thermophila
    • Gaertig J, Thatcher TH, Gu L, Gorovsky MA (1994) Electroporation-mediated replacement of a positively and negatively selectable beta-tubulin gene in Tetrahymena thermophila. Proc Natl Acad Sci USA 91: 4549-4553
    • (1994) Proc Natl Acad Sci USA , vol.91 , pp. 4549-4553
    • Gaertig, J.1    Thatcher, T.H.2    Gu, L.3    Gorovsky, M.A.4
  • 13
    • 0031943645 scopus 로고    scopus 로고
    • A promoter mutation affecting replication of the Tetrahymena ribosomal DNA minichromosome
    • Gallagher RC, Blackburn EH (1998) A promoter mutation affecting replication of the Tetrahymena ribosomal DNA minichromosome. Mol Cell Biol 18: 3021-3033
    • (1998) Mol Cell Biol , vol.18 , pp. 3021-3033
    • Gallagher, R.C.1    Blackburn, E.H.2
  • 14
    • 0029586090 scopus 로고
    • Conserved initiator proteins in eukaryotes
    • Gavin KA, Hidaka M, Stillman B (1995) Conserved initiator proteins in eukaryotes. Science 270: 1667-1671
    • (1995) Science , vol.270 , pp. 1667-1671
    • Gavin, K.A.1    Hidaka, M.2    Stillman, B.3
  • 15
    • 33845653716 scopus 로고    scopus 로고
    • Discrete functional elements required for initiation activity of the Chinese hamster dihydrofolate reductase origin beta at ectopic chromosomal sites
    • Gray SJ, Liu G, Altman AL, Small LE, Fanning E (2007) Discrete functional elements required for initiation activity of the Chinese hamster dihydrofolate reductase origin beta at ectopic chromosomal sites. Exp Cell Res 313: 109-120
    • (2007) Exp Cell Res , vol.313 , pp. 109-120
    • Gray, S.J.1    Liu, G.2    Altman, A.L.3    Small, L.E.4    Fanning, E.5
  • 16
    • 0024978857 scopus 로고
    • A telomeric sequence in the RNA of Tetrahymena telomerase required for telomere repeat synthesis
    • Greider CW, Blackburn EH (1989) A telomeric sequence in the RNA of Tetrahymena telomerase required for telomere repeat synthesis. Nature 337: 331-337
    • (1989) Nature , vol.337 , pp. 331-337
    • Greider, C.W.1    Blackburn, E.H.2
  • 18
    • 0031755017 scopus 로고    scopus 로고
    • Multiple orientation-dependent, synergistically interacting, similar domains in the ribosomal DNA replication origin of the fission yeast
    • Kim SM, Huberman JA (1998) Multiple orientation-dependent, synergistically interacting, similar domains in the ribosomal DNA replication origin of the fission yeast, Schizosaccharomyces pombe. Mol Cell Biol 18: 7294-7303
    • (1998) Schizosaccharomyces pombe. Mol Cell Biol , vol.18 , pp. 7294-7303
    • Kim, S.M.1    Huberman, J.A.2
  • 19
    • 0035158487 scopus 로고    scopus 로고
    • Site-specific DNA binding of the Schizosaccharomyces pombe origin recognition complex is determined by the Orc4 subunit
    • Kong DC, DePamphilis ML (2001) Site-specific DNA binding of the Schizosaccharomyces pombe origin recognition complex is determined by the Orc4 subunit. Mol Cell Biol 21: 8095-8103
    • (2001) Mol Cell Biol , vol.21 , pp. 8095-8103
    • Kong, D.C.1    DePamphilis, M.L.2
  • 20
    • 0023056214 scopus 로고
    • Control of rDNA replication in Tetrahymena involves a cis-acting upstream repeat of a promoter element
    • Larson DD, Blackburn EH, Yaeger PC, Orias E (1986) Control of rDNA replication in Tetrahymena involves a cis-acting upstream repeat of a promoter element. Cell 47: 229-240
    • (1986) Cell , vol.47 , pp. 229-240
    • Larson, D.D.1    Blackburn, E.H.2    Yaeger, P.C.3    Orias, E.4
  • 21
    • 0030712877 scopus 로고    scopus 로고
    • Architecture of the yeast origin recognition complex bound to origins of DNA replication
    • Lee D, Bell SP (1997) Architecture of the yeast origin recognition complex bound to origins of DNA replication. Mol Cell Biol 17: 7159-7168
    • (1997) Mol Cell Biol , vol.17 , pp. 7159-7168
    • Lee, D.1    Bell, S.P.2
  • 22
    • 0030811529 scopus 로고    scopus 로고
    • Type I elements mediate replication fork pausing at conserved upstream sites in the Tetrahymena thermophila ribosomal DNA minichromosome
    • MacAlpine DM, Zhang Z, Kapler GM (1997) Type I elements mediate replication fork pausing at conserved upstream sites in the Tetrahymena thermophila ribosomal DNA minichromosome. Mol Cell Biol 17: 4517-4525
    • (1997) Mol Cell Biol , vol.17 , pp. 4517-4525
    • MacAlpine, D.M.1    Zhang, Z.2    Kapler, G.M.3
  • 23
    • 0026508417 scopus 로고
    • A yeast chromosomal origin of DNA replication defined by multiple functional elements
    • Marahrens Y, Stillman B (1992) A yeast chromosomal origin of DNA replication defined by multiple functional elements. Science 255: 817-823
    • (1992) Science , vol.255 , pp. 817-823
    • Marahrens, Y.1    Stillman, B.2
  • 24
    • 0023071729 scopus 로고
    • Comparisons of large subunit rRNAs reveal some eukaryote-specific elements of secondary structure
    • Michot B, Bachellerie JP (1987) Comparisons of large subunit rRNAs reveal some eukaryote-specific elements of secondary structure. Biochimie 69: 11-23
    • (1987) Biochimie , vol.69 , pp. 11-23
    • Michot, B.1    Bachellerie, J.P.2
  • 25
    • 33845212649 scopus 로고    scopus 로고
    • Binding of AlF-C, an Orc1-binding transcriptional regulator, enhances replicator activity of the rat aldolase B origin
    • Minami H, Takahashi J, Suto A, Saitoh Y, Tsutsumi K (2006) Binding of AlF-C, an Orc1-binding transcriptional regulator, enhances replicator activity of the rat aldolase B origin. Mol Cell Biol 26: 8770-8780
    • (2006) Mol Cell Biol , vol.26 , pp. 8770-8780
    • Minami, H.1    Takahashi, J.2    Suto, A.3    Saitoh, Y.4    Tsutsumi, K.5
  • 26
    • 0034141734 scopus 로고    scopus 로고
    • Three different proteins recognize a multifunctional determinant that controls replication initiation, fork arrest and transcription in Tetrahymena
    • Mohammad M, Saha S, Kapler GM (2000) Three different proteins recognize a multifunctional determinant that controls replication initiation, fork arrest and transcription in Tetrahymena. Nucleic Acids Res 28: 843-851
    • (2000) Nucleic Acids Res , vol.28 , pp. 843-851
    • Mohammad, M.1    Saha, S.2    Kapler, G.M.3
  • 27
    • 0038450336 scopus 로고    scopus 로고
    • Characterization of a novel origin recognition complex-like complex: Implications for DNA recognition, cell cycle control, and locus-specific gene amplification
    • Mohammad M, York RD, Hommel J, Kapler GM (2003) Characterization of a novel origin recognition complex-like complex: implications for DNA recognition, cell cycle control, and locus-specific gene amplification. Mol Cell Biol 23: 5005-5017
    • (2003) Mol Cell Biol , vol.23 , pp. 5005-5017
    • Mohammad, M.1    York, R.D.2    Hommel, J.3    Kapler, G.M.4
  • 28
    • 19644386028 scopus 로고    scopus 로고
    • TIF1 represses rDNA replication initiation, but promotes normal S phase progression and chromosome transmission in Tetrahymena
    • Morrison TL, Yakisich JS, Cassidy-Hanley D, Kapler GM (2005) TIF1 represses rDNA replication initiation, but promotes normal S phase progression and chromosome transmission in Tetrahymena. Mol Biol Cell 16: 2624-2635
    • (2005) Mol Biol Cell , vol.16 , pp. 2624-2635
    • Morrison, T.L.1    Yakisich, J.S.2    Cassidy-Hanley, D.3    Kapler, G.M.4
  • 29
    • 0029048961 scopus 로고
    • Tandem repeats of the 50 nontranscribed spacer of Tetrahymena rDNA function as high copy number autonomous replicons in the macronucleus but do not prevent ribosomal-rDNA gene dosage regulation
    • Pan WJ, Blackburn EH (1995) Tandem repeats of the 50 nontranscribed spacer of Tetrahymena rDNA function as high copy number autonomous replicons in the macronucleus but do not prevent ribosomal-rDNA gene dosage regulation. Nucleic Acids Res 23: 1561-1569
    • (1995) Nucleic Acids Res , vol.23 , pp. 1561-1569
    • Pan, W.J.1    Blackburn, E.H.2
  • 31
    • 1842509904 scopus 로고    scopus 로고
    • DNA topology, not DNA sequence, is a critical determinant for Drosophila ORC-DNA binding
    • Remus D, Beall EL, Botchan MR (2004) DNA topology, not DNA sequence, is a critical determinant for Drosophila ORC-DNA binding. EMBO J 23: 897-907
    • (2004) EMBO J , vol.23 , pp. 897-907
    • Remus, D.1    Beall, E.L.2    Botchan, M.R.3
  • 32
    • 0034695417 scopus 로고    scopus 로고
    • Allele-specific protein-DNA interactions between the single-stranded DNA-binding protein, ssA-TIBF, and DNA replication determinants in Tetrahymena
    • Saha S, Kapler GM (2000) Allele-specific protein-DNA interactions between the single-stranded DNA-binding protein, ssA-TIBF, and DNA replication determinants in Tetrahymena. J Mol Biol 295: 423-439
    • (2000) J Mol Biol , vol.295 , pp. 423-439
    • Saha, S.1    Kapler, G.M.2
  • 33
    • 0035977035 scopus 로고    scopus 로고
    • Cloning and biochemical analysis of the Tetrahymena origin binding protein TIF1 - competitive DNA binding in vitro and in vivo to critical rDNA replication determinants
    • Saha S, Nicholson A, Kapler GM (2001) Cloning and biochemical analysis of the Tetrahymena origin binding protein TIF1 - competitive DNA binding in vitro and in vivo to critical rDNA replication determinants. J Biol Chem 276: 45417-45426
    • (2001) J Biol Chem , vol.276 , pp. 45417-45426
    • Saha, S.1    Nicholson, A.2    Kapler, G.M.3
  • 34
    • 0346873031 scopus 로고    scopus 로고
    • Genome-wide distribution of DNA replication origins at A+T-rich islands in Schizosaccharomyces pombe
    • Segurado M, de Luis A, Antequera F (2003) Genome-wide distribution of DNA replication origins at A+T-rich islands in Schizosaccharomyces pombe. EMBO Rep 4: 1048-1053
    • (2003) EMBO Rep , vol.4 , pp. 1048-1053
    • Segurado, M.1    de Luis, A.2    Antequera, F.3
  • 35
    • 0036353344 scopus 로고    scopus 로고
    • RNA affinity tags for purification of RNAs and ribonucleoprotein complexes
    • Srisawat C, Engelke DR (2002) RNA affinity tags for purification of RNAs and ribonucleoprotein complexes. Methods 26: 156-161
    • (2002) Methods , vol.26 , pp. 156-161
    • Srisawat, C.1    Engelke, D.R.2
  • 36
    • 0032489021 scopus 로고    scopus 로고
    • Mechanical devices of the spliceosome: Motors, clocks, springs, and things
    • Staley JP, Guthrie C (1998) Mechanical devices of the spliceosome: motors, clocks, springs, and things. Cell 92: 315-326
    • (1998) Cell , vol.92 , pp. 315-326
    • Staley, J.P.1    Guthrie, C.2
  • 37
    • 10044249141 scopus 로고    scopus 로고
    • Developmental gene amplification and origin regulation
    • Tower J (2004) Developmental gene amplification and origin regulation. Annu Rev Genet 38: 273-304
    • (2004) Annu Rev Genet , vol.38 , pp. 273-304
    • Tower, J.1
  • 38
    • 0036138203 scopus 로고    scopus 로고
    • Functional genomics: The coming of age for Tetrahymena thermophila
    • Turkewitz AP, Orias E, Kapler G (2002) Functional genomics: the coming of age for Tetrahymena thermophila. Trends Genet 18: 35-40
    • (2002) Trends Genet , vol.18 , pp. 35-40
    • Turkewitz, A.P.1    Orias, E.2    Kapler, G.3
  • 39
    • 0042125189 scopus 로고    scopus 로고
    • Sequence-independent DNA binding and replication initiation by the human origin recognition complex
    • Vashee S, Cvetic C, Lu W, Simancek P, Kelly TJ, Walter JC (2003) Sequence-independent DNA binding and replication initiation by the human origin recognition complex. Genes Dev 17: 1894-1908
    • (2003) Genes Dev , vol.17 , pp. 1894-1908
    • Vashee, S.1    Cvetic, C.2    Lu, W.3    Simancek, P.4    Kelly, T.J.5    Walter, J.C.6
  • 40
    • 33845426046 scopus 로고    scopus 로고
    • TIF1 activates the intra-S-phase checkpoint response in the diploid micronucleus and amitotic polyploid macronucleus of Tetrahymena
    • Yakisich JS, Sandoval PY, Morrison TL, Kapler GM (2006) TIF1 activates the intra-S-phase checkpoint response in the diploid micronucleus and amitotic polyploid macronucleus of Tetrahymena. Mol Biol Cell 17: 5185-5197
    • (2006) Mol Biol Cell , vol.17 , pp. 5185-5197
    • Yakisich, J.S.1    Sandoval, P.Y.2    Morrison, T.L.3    Kapler, G.M.4
  • 41
    • 0037188889 scopus 로고    scopus 로고
    • Noc3p, a bHLH protein, plays an integral role in the initiation of DNA replication in budding yeast
    • Zhang Y, Yu Z, Fu X, Liang C (2002) Noc3p, a bHLH protein, plays an integral role in the initiation of DNA replication in budding yeast. Cell 109: 849-860
    • (2002) Cell , vol.109 , pp. 849-860
    • Zhang, Y.1    Yu, Z.2    Fu, X.3    Liang, C.4
  • 42
    • 0030863327 scopus 로고    scopus 로고
    • Developmental regulation of DNA replication: Replication fork barriers and programmed gene amplification in Tetrahymena thermophila
    • Zhang Z, MacAlpine DM, Kapler GM (1997) Developmental regulation of DNA replication: replication fork barriers and programmed gene amplification in Tetrahymena thermophila. Mol Cell Biol 17: 6147-6156
    • (1997) Mol Cell Biol , vol.17 , pp. 6147-6156
    • Zhang, Z.1    MacAlpine, D.M.2    Kapler, G.M.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.