메뉴 건너뛰기




Volumn 8, Issue 12, 2007, Pages 1129-1134

A variable topology for the 30-nm chromatin fibre

Author keywords

[No Author keywords available]

Indexed keywords

DNA; HIGH MOBILITY GROUP A2 PROTEIN; HIGH MOBILITY GROUP B PROTEIN; HISTONE;

EID: 36749101388     PISSN: 1469221X     EISSN: 14693178     Source Type: Journal    
DOI: 10.1038/sj.embor.7401115     Document Type: Review
Times cited : (37)

References (44)
  • 1
    • 0021233648 scopus 로고
    • Higher order structure in a short repeat length chromatin
    • Allan J, Rau DC, Harborne N, Gould H (1984) Higher order structure in a short repeat length chromatin. J Cell Biol 98:1320-1327
    • (1984) J Cell Biol , vol.98 , pp. 1320-1327
    • Allan, J.1    Rau, D.C.2    Harborne, N.3    Gould, H.4
  • 2
    • 0025005757 scopus 로고    scopus 로고
    • Athey BD, Smith MF, Ranked DA Williams SP, Langmore JP(1990) The diameters of frozen-hydrated chromatin fibers increase with DNA linker length: Evidence in support of variable diameter models for chromatin. J Cell Biol 111: 795-806
    • Athey BD, Smith MF, Ranked DA Williams SP, Langmore JP(1990) The diameters of frozen-hydrated chromatin fibers increase with DNA linker length: Evidence in support of variable diameter models for chromatin. J Cell Biol 111: 795-806
  • 3
    • 0032564478 scopus 로고    scopus 로고
    • (11998) Nucleosomes, linker DNA, and linker histone form a unique structural motif that directs the higher-order folding and compaction of chromatin
    • Bednar J, Horowitz RA, Grigoryev SA, Carruthers LM, Hansen JC, Koster AJ, Woodcock CL (11998) Nucleosomes, linker DNA, and linker histone form a unique structural motif that directs the higher-order folding and compaction of chromatin. Proc Natl Acad Sci USA 93 14173-14178
    • Proc Natl Acad Sci USA , vol.93 , pp. 14173-14178
    • Bednar, J.1    Horowitz, R.A.2    Grigoryev, S.A.3    Carruthers, L.M.4    Hansen, J.C.5    Koster, A.J.6    Woodcock, C.L.7
  • 4
    • 0345698703 scopus 로고    scopus 로고
    • Interdigitated solenoid model for compact chromatin fibers
    • Daban JR, Bermúdez A (1998) Interdigitated solenoid model for compact chromatin fibers. Biochemistry 37:4299-4304
    • (1998) Biochemistry , vol.37 , pp. 4299-4304
    • Daban, J.R.1    Bermúdez, A.2
  • 5
    • 0023391097 scopus 로고
    • The globular domain of histone H5 is internally located in the 30 nm fibre: An immunochemical study
    • Dimitrov SI, Russanova R, Pashev IG (1987) The globular domain of histone H5 is internally located in the 30 nm fibre: An immunochemical study. EMBO J 8: 2387-2392
    • (1987) EMBO J , vol.8 , pp. 2387-2392
    • Dimitrov, S.I.1    Russanova, R.2    Pashev, I.G.3
  • 7
    • 0022548649 scopus 로고
    • Structure of the 30 nm chromatin fiber
    • Felsenfeld G, McGhee JD (1986) Structure of the 30 nm chromatin fiber. Cell 144: 375-377
    • (1986) Cell , vol.144 , pp. 375-377
    • Felsenfeld, G.1    McGhee, J.D.2
  • 8
    • 0000878535 scopus 로고
    • (11976) Solenoidal model for superstructure in chromatin
    • Finch, JT, Klug A (11976) Solenoidal model for superstructure in chromatin. Proc Natl Acad Sci USA 73:1897-1901
    • (1897) Proc Natl Acad Sci USA , vol.73
    • Finch, J.T.1    Klug, A.2
  • 10
    • 33845687060 scopus 로고    scopus 로고
    • Loss of linker histone H1 in cellular senescence
    • Funayama R, Saito M, Tanobe H, Ishikawa F (2006) Loss of linker histone H1 in cellular senescence. J Cell Biol 175: 869-880
    • (2006) J Cell Biol , vol.175 , pp. 869-880
    • Funayama, R.1    Saito, M.2    Tanobe, H.3    Ishikawa, F.4
  • 11
    • 0023447159 scopus 로고
    • Chromatin higher-order structure studied by neutron scattering and scanning transmission electron microscopy
    • Gerchman SE, Ramakrishnan V (1987) Chromatin higher-order structure studied by neutron scattering and scanning transmission electron microscopy. Proc Natl Acad Sci USA 84: 7802-7806
    • (1987) Proc Natl Acad Sci USA , vol.84 , pp. 7802-7806
    • Gerchman, S.E.1    Ramakrishnan, V.2
  • 12
    • 0035833993 scopus 로고    scopus 로고
    • Distinctive higher-order chromatin structure at mammalian centromeres
    • Gilbert N, Allan J (2001) Distinctive higher-order chromatin structure at mammalian centromeres. Proc Natl Acad Sci USA 98 11949-11954
    • (2001) Proc Natl Acad Sci USA , vol.98 , pp. 11949-11954
    • Gilbert, N.1    Allan, J.2
  • 13
    • 0028314834 scopus 로고
    • Histone H1 is located in the interior of the chromatin 30-nm filament
    • Graziano V, Gerchman SE, Schneider DK, Ramakrishnan V (1994) Histone H1 is located in the interior of the chromatin 30-nm filament. Nature 368: 351-354
    • (1994) Nature , vol.368 , pp. 351-354
    • Graziano, V.1    Gerchman, S.E.2    Schneider, D.K.3    Ramakrishnan, V.4
  • 15
    • 0024426046 scopus 로고
    • A stable α-helical element in the carboxy-terminal domain of free and chromatin-bound HI from sea urchin sperm
    • Hill CS, Martin SR, Thomas JO (1989) A stable α-helical element in the carboxy-terminal domain of free and chromatin-bound HI from sea urchin sperm. EMBO J 8: 2591-2599
    • (1989) EMBO J , vol.8 , pp. 2591-2599
    • Hill, C.S.1    Martin, S.R.2    Thomas, J.O.3
  • 17
    • 0034080775 scopus 로고    scopus 로고
    • Chiral discotic columnar germs of nucleosome core particles
    • Livolant F, Leforestier A (2000) Chiral discotic columnar germs of nucleosome core particles. Biophys J 78: 2716-2729
    • (2000) Biophys J , vol.78 , pp. 2716-2729
    • Livolant, F.1    Leforestier, A.2
  • 18
    • 1842411320 scopus 로고    scopus 로고
    • Crystal structure of the nucleosome core particle at 2.8 A resolution
    • Luger K, Mader AW, Richmond RK, Sargent DF, Richmond TJ (1997) Crystal structure of the nucleosome core particle at 2.8 A resolution. Nature 389: 251-260
    • (1997) Nature , vol.389 , pp. 251-260
    • Luger, K.1    Mader, A.W.2    Richmond, R.K.3    Sargent, D.F.4    Richmond, T.J.5
  • 19
    • 0020787733 scopus 로고
    • Salt-induced chromatin transitions. A flow linear dichroism study
    • Makarov VL, Dimitrov SI, Petrov PT (1983) Salt-induced chromatin transitions. A flow linear dichroism study. Eur J Biochem 133 491-497
    • (1983) Eur J Biochem , vol.133 , pp. 491-497
    • Makarov, V.L.1    Dimitrov, S.I.2    Petrov, P.T.3
  • 20
    • 0020645755 scopus 로고
    • Higher order structure of chromatin: Orientation of nucleosomes within the 30 nm chromatin solenoid is independent of species and spacer length
    • McGhee JD, Nickol JM, Felsenfeld G, Rau DC (1983) Higher order structure of chromatin: Orientation of nucleosomes within the 30 nm chromatin solenoid is independent of species and spacer length. Cell 33 831-841
    • (1983) Cell , vol.33 , pp. 831-841
    • McGhee, J.D.1    Nickol, J.M.2    Felsenfeld, G.3    Rau, D.C.4
  • 22
    • 0016687530 scopus 로고
    • Electron microscopic and biochemical evidence that chromatin structure is a repeating unit
    • Oudet P, Gross-Bellard M, Chambon P (1975) Electron microscopic and biochemical evidence that chromatin structure is a repeating unit. Cell 4: 281-300
    • (1975) Cell , vol.4 , pp. 281-300
    • Oudet, P.1    Gross-Bellard, M.2    Chambon, P.3
  • 23
    • 0029115144 scopus 로고
    • Probing the conformation of nucleosome linker DNA in situ with pyrimidine dimer formation
    • Pehrson J (1995) Probing the conformation of nucleosome linker DNA in situ with pyrimidine dimer formation. J Biol Chem 270: 22440-22444
    • (1995) J Biol Chem , vol.270 , pp. 22440-22444
    • Pehrson, J.1
  • 24
    • 33744831161 scopus 로고    scopus 로고
    • Structure of the'30 nm' chromatin fibre: A key role for the linker histone
    • Robinson PJJ, Rhodes D (2006) Structure of the'30 nm' chromatin fibre: A key role for the linker histone. Curr Opin Struct Biol 16: 336-343
    • (2006) Curr Opin Struct Biol , vol.16 , pp. 336-343
    • Robinson, P.J.J.1    Rhodes, D.2
  • 25
    • 33646242052 scopus 로고    scopus 로고
    • EM measurements define the dimensions of the "30 nm" chromatin fiber. Evidence for a compact interdigitated structure
    • Robinson PJJ, Fairall L, Huynh VAT, Rhodes D (2006) EM measurements define the dimensions of the "30 nm" chromatin fiber. Evidence for a compact interdigitated structure. Proc Natl Acad Sci USA 103 6506-6511
    • (2006) Proc Natl Acad Sci USA , vol.103 , pp. 6506-6511
    • Robinson, P.J.J.1    Fairall, L.2    Huynh, V.A.T.3    Rhodes, D.4
  • 26
    • 0032553448 scopus 로고    scopus 로고
    • Chromatin conformation in living cells: Support for a zig-zag model of the 30 nm chromatin fiber
    • Rydberg B, Holley WR, Mian IS, Chatterje A (1998) Chromatin conformation in living cells: Support for a zig-zag model of the 30 nm chromatin fiber. J Mol Biol 284: 71-84
    • (1998) J Mol Biol , vol.284 , pp. 71-84
    • Rydberg, B.1    Holley, W.R.2    Mian, I.S.3    Chatterje, A.4
  • 27
    • 21844436803 scopus 로고    scopus 로고
    • X-ray structure of a tetranucleosome and its implications for the chromatin fibre
    • Schalch T, Duda S, Sargent D, Richmond TJ (2005) X-ray structure of a tetranucleosome and its implications for the chromatin fibre. Nature 436: 138-141
    • (2005) Nature , vol.436 , pp. 138-141
    • Schalch, T.1    Duda, S.2    Sargent, D.3    Richmond, T.J.4
  • 28
    • 0022456148 scopus 로고
    • Higher order structure of chromatin: Evidence from photochemically detected linear dichroism
    • Sen D, Mitra S, Crothers DM (1986) Higher order structure of chromatin: evidence from photochemically detected linear dichroism. Biochemistry 25: 3441-3447
    • (1986) Biochemistry , vol.25 , pp. 3441-3447
    • Sen, D.1    Mitra, S.2    Crothers, D.M.3
  • 29
    • 0042622604 scopus 로고    scopus 로고
    • Linker histone-dependent organization and dynamics of nucleosome entry/exit DNAs
    • Sivolob A, Prunell A (2003) Linker histone-dependent organization and dynamics of nucleosome entry/exit DNAs. J Mol Biol 331: 1025-1040
    • (2003) J Mol Biol , vol.331 , pp. 1025-1040
    • Sivolob, A.1    Prunell, A.2
  • 30
    • 0025068786 scopus 로고
    • Radial density distribution of chromatin: Evidence that chromatin fibers have solid centers
    • Smith MF, Athey BD, Williams SP, Langmore JP (1990) Radial density distribution of chromatin: Evidence that chromatin fibers have solid centers. J Cell Biol 110: 245-254
    • (1990) J Cell Biol , vol.110 , pp. 245-254
    • Smith, M.F.1    Athey, B.D.2    Williams, S.P.3    Langmore, J.P.4
  • 31
    • 0017194079 scopus 로고
    • The DNA repeat lengths in chromatins from sea urchin sperm and gastrule cells are markedly different
    • Spadafora C, Bellard M, Compton JL, Chambon P (1976) The DNA repeat lengths in chromatins from sea urchin sperm and gastrule cells are markedly different. FEBS Lett 69: 281-285
    • (1976) FEBS Lett , vol.69 , pp. 281-285
    • Spadafora, C.1    Bellard, M.2    Compton, J.L.3    Chambon, P.4
  • 32
    • 0021092924 scopus 로고
    • Organization of internucleosomal DNA in rat liver chromatin
    • Strauss F, Prunell A (1983) Organization of internucleosomal DNA in rat liver chromatin. EMBO J 2:51-56
    • (1983) EMBO J , vol.2 , pp. 51-56
    • Strauss, F.1    Prunell, A.2
  • 33
    • 0018581187 scopus 로고
    • Involvementof histone H1 in the organization of the nucleosome and of the salt-dependent superstructures of chromatin
    • Thoma F, KollerT, KlugA (1979) Involvementof histone H1 in the organization of the nucleosome and of the salt-dependent superstructures of chromatin. J Cell Biol 83: 403-427
    • (1979) J Cell Biol , vol.83 , pp. 403-427
    • Thoma, F.1    Koller, T.2    Klug, A.3
  • 34
    • 0019197607 scopus 로고
    • Size-dependence of a stable higher-order structure of chromatin
    • Thomas JO, Butler PJG (1980) Size-dependence of a stable higher-order structure of chromatin. J Mol Biol 144: 89-93
    • (1980) J Mol Biol , vol.144 , pp. 89-93
    • Thomas, J.O.1    Butler, P.J.G.2
  • 35
    • 0017115264 scopus 로고
    • Yeast chromatin structure
    • Thomas JO, Furber V (1977) Yeast chromatin structure. FEBS Lett 66: 274-280
    • (1977) FEBS Lett , vol.66 , pp. 274-280
    • Thomas, J.O.1    Furber, V.2
  • 36
    • 0017713144 scopus 로고
    • Variation in chromatin structure in two types of cell from the same tissue: A short DNA repeat length in cerebral cortex neurons
    • Thomas JO, Thompson RJ (1977)Variation in chromatin structure in two types of cell from the same tissue: A short DNA repeat length in cerebral cortex neurons. Cell 10: 633-640
    • (1977) Cell , vol.10 , pp. 633-640
    • Thomas, J.O.1    Thompson, R.J.2
  • 37
    • 33847106524 scopus 로고    scopus 로고
    • Higher-order structures of chromatin: The elusive 30 nm fiber
    • Tremethick DJ (2007) Higher-order structures of chromatin: The elusive 30 nm fiber. Cell 128: 651-654
    • (2007) Cell , vol.128 , pp. 651-654
    • Tremethick, D.J.1
  • 38
    • 0026517738 scopus 로고
    • A relationship between the helical twist of DNA and the ordered positioning of nucleosomes in all eukaryotic cells
    • Widom J (1992) A relationship between the helical twist of DNA and the ordered positioning of nucleosomes in all eukaryotic cells. Proc Natl Acad Sci USA 89:1095-1099
    • (1992) Proc Natl Acad Sci USA , vol.89 , pp. 1095-1099
    • Widom, J.1
  • 39
    • 0022273023 scopus 로고
    • Structure of the 300 Å chromatin filament: X-ray diffraction from oriented samples
    • Widom J, Klug A (1985) Structure of the 300 Å chromatin filament: X-ray diffraction from oriented samples. Cell 143: 207-213
    • (1985) Cell , vol.143 , pp. 207-213
    • Widom, J.1    Klug, A.2
  • 40
    • 0022650876 scopus 로고
    • Chromatin fibers are left-handed double helices with diameter and mass per unit length that depend on linker length
    • Williams SP, Athey BD, Muglia LJ, Schappe RS, Gough AH, Langmore JP (1986) Chromatin fibers are left-handed double helices with diameter and mass per unit length that depend on linker length. Biophys 49 233-248
    • (1986) Biophys , vol.49 , pp. 233-248
    • Williams, S.P.1    Athey, B.D.2    Muglia, L.J.3    Schappe, R.S.4    Gough, A.H.5    Langmore, J.P.6
  • 41
    • 36749082174 scopus 로고    scopus 로고
    • An all-atom model of the chromatin fibre containing linker histones reveals a versatile structure tuned by nucleosomal repeat length
    • Wong H,Victor JM, Mozziconacci J (2007) An all-atom model of the chromatin fibre containing linker histones reveals a versatile structure tuned by nucleosomal repeat length. PLoS ONE 2: E877
    • (2007) PLoS ONE , vol.2
    • Wong, H.1    Victor, J.M.2    Mozziconacci, J.3
  • 42
    • 0035313770 scopus 로고    scopus 로고
    • Higher-order structure of chromatin and chromosomes
    • Woodcock CL, Dimitrov S (2001) Higher-order structure of chromatin and chromosomes. Curr Opin Genet Dev 11: 130-135
    • (2001) Curr Opin Genet Dev , vol.11 , pp. 130-135
    • Woodcock, C.L.1    Dimitrov, S.2
  • 43
    • 0021250785 scopus 로고
    • The higher-order structure of chromatin: Evidence for a helical ribbon arrangement
    • Woodcock CL, Frado LL, Rattner JB (1984) The higher-order structure of chromatin: Evidence for a helical ribbon arrangement. J Cell Biol 99: 42-52
    • (1984) J Cell Biol , vol.99 , pp. 42-52
    • Woodcock, C.L.1    Frado, L.L.2    Rattner, J.B.3
  • 44
    • 0019542662 scopus 로고
    • Structure of chromatin and the linking number of DNA
    • Worcel A, Strogatz S, Riley D (1981) Structure of chromatin and the linking number of DNA. Proc Natl Acad Sci USA 78: 1461-1465
    • (1981) Proc Natl Acad Sci USA , vol.78 , pp. 1461-1465
    • Worcel, A.1    Strogatz, S.2    Riley, D.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.