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Volumn 21, Issue 3, 2007, Pages

A computational framework for simulation of biogeochemical tracers in the ocean

Author keywords

[No Author keywords available]

Indexed keywords

BIOGEOCHEMISTRY; COMPUTER SIMULATION; MATHEMATICAL MODELS; OCEANOGRAPHY; PARAMETERIZATION; TRACE ELEMENTS;

EID: 36749068863     PISSN: 08866236     EISSN: None     Source Type: Journal    
DOI: 10.1029/2007GB002923     Document Type: Article
Times cited : (98)

References (52)
  • 1
    • 0003660984 scopus 로고    scopus 로고
    • Petsc users manual,
    • Tech. Rep. ANL-95/11-Rev.2.1.5, Argonne Natl. Lab, Argonne, Ill
    • Balay, S., W. D. Gropp, L. C. McInnes, and B. F. Smith (2003), Petsc users manual, Tech. Rep. ANL-95/11-Rev.2.1.5, Argonne Natl. Lab., Argonne, Ill.
    • (2003)
    • Balay, S.1    Gropp, W.D.2    McInnes, L.C.3    Smith, B.F.4
  • 2
    • 0028698107 scopus 로고
    • Reverse accumulation and attractive fixed points
    • Christianson, B. (1994), Reverse accumulation and attractive fixed points, Optim. Methods Software, 3, 311-326.
    • (1994) Optim. Methods Software , vol.3 , pp. 311-326
    • Christianson, B.1
  • 3
    • 84952419741 scopus 로고
    • On the estimation of sparse Jacobian matrices
    • Curtis, A. R., M. J. D. Powell, and J. K. Reid (1974), On the estimation of sparse Jacobian matrices, J. Inst. Math. Appl., 13, 117-119.
    • (1974) J. Inst. Math. Appl , vol.13 , pp. 117-119
    • Curtis, A.R.1    Powell, M.J.D.2    Reid, J.K.3
  • 5
    • 20444383904 scopus 로고    scopus 로고
    • Interactions of the iron and phosphorus cycles: A three-dimensional model study
    • doi:10.1029/2004GB002342
    • Dutkiewicz, S., M. Follows, and P. Parekh (2005), Interactions of the iron and phosphorus cycles: A three-dimensional model study, Global Biogeochem. Cycles, 19, GB1021, doi:10.1029/2004GB002342.
    • (2005) Global Biogeochem. Cycles , vol.19
    • Dutkiewicz, S.1    Follows, M.2    Parekh, P.3
  • 6
    • 33644786238 scopus 로고    scopus 로고
    • Controls on ocean productivity and air-sea carbon flux: An adjoint model sensitivity study
    • doi:10.1029/ 2005GL024987
    • Dutkiewicz, S., M. J. Follows, P. Heimbach, and J. Marshall (2006), Controls on ocean productivity and air-sea carbon flux: An adjoint model sensitivity study, Geophys. Res. Lett., 33, L02603, doi:10.1029/ 2005GL024987.
    • (2006) Geophys. Res. Lett , vol.33
    • Dutkiewicz, S.1    Follows, M.J.2    Heimbach, P.3    Marshall, J.4
  • 7
    • 0035080805 scopus 로고    scopus 로고
    • Testing a marine ecosystem model: Sensitivity analysis and parameter optimization
    • Fennel, K., M. Losch, J. Schröter, and M. Wenzel (2001), Testing a marine ecosystem model: Sensitivity analysis and parameter optimization, J. Mar. Syst., 28, 45-63.
    • (2001) J. Mar. Syst , vol.28 , pp. 45-63
    • Fennel, K.1    Losch, M.2    Schröter, J.3    Wenzel, M.4
  • 8
    • 1842634990 scopus 로고    scopus 로고
    • The origin, pathway, and destination of Nino-3 water estimated by a simulated passive tracer and its adjoint
    • Fukumori, I., T. Lee, B. Cheng, and D. Menemenlis (2004), The origin, pathway, and destination of Nino-3 water estimated by a simulated passive tracer and its adjoint, J. Phys. Oceanogr., 34, 582-604.
    • (2004) J. Phys. Oceanogr , vol.34 , pp. 582-604
    • Fukumori, I.1    Lee, T.2    Cheng, B.3    Menemenlis, D.4
  • 9
    • 28244465516 scopus 로고    scopus 로고
    • What color is your Jacobian? Graph coloring for computing derivatives
    • Gebremedhin, A., F. Manne, and A. Pothen (2005), What color is your Jacobian? Graph coloring for computing derivatives, SIAM Rev., 47, 629-705.
    • (2005) SIAM Rev , vol.47 , pp. 629-705
    • Gebremedhin, A.1    Manne, F.2    Pothen, A.3
  • 10
    • 0000163627 scopus 로고
    • Isopycnal mixing in ocean circulation models
    • Gent, P. R., and J. C. McWilliams (1990), Isopycnal mixing in ocean circulation models, J. Phys. Oceanogr., 20, 150-155.
    • (1990) J. Phys. Oceanogr , vol.20 , pp. 150-155
    • Gent, P.R.1    McWilliams, J.C.2
  • 11
    • 0032269567 scopus 로고    scopus 로고
    • Recipes for adjoint code generation
    • Giering, R., and T. Kaminski (1998), Recipes for adjoint code generation, Trans. Math. Software, 24, 437-474.
    • (1998) Trans. Math. Software , vol.24 , pp. 437-474
    • Giering, R.1    Kaminski, T.2
  • 12
    • 2442430877 scopus 로고    scopus 로고
    • On the iterative solution of adjoint equations
    • edited by G. Corliss et al, pp, Springer, New York
    • Giles, M. B. (2001), On the iterative solution of adjoint equations, in Automatic Differentiation: From Simulation to Optimization, edited by G. Corliss et al., pp. 145-152, Springer, New York.
    • (2001) Automatic Differentiation: From Simulation to Optimization , pp. 145-152
    • Giles, M.B.1
  • 13
    • 29744464549 scopus 로고    scopus 로고
    • Pathways into the Pacific Equatorial Undercurrent: A trajectory analysis
    • Goodman, P. J., W. Hazeleger, P. de Vries, and M. Cane (2005), Pathways into the Pacific Equatorial Undercurrent: A trajectory analysis, J. Phys. Oceanogr., 35, 2134-2151.
    • (2005) J. Phys. Oceanogr , vol.35 , pp. 2134-2151
    • Goodman, P.J.1    Hazeleger, W.2    de Vries, P.3    Cane, M.4
  • 14
    • 0031037673 scopus 로고    scopus 로고
    • Interdecadal climate fluctuations that depend on exchanges between the tropics and extratropics
    • Gu, D., and S. Philander (1997), Interdecadal climate fluctuations that depend on exchanges between the tropics and extratropics, Science, 275, 805-807.
    • (1997) Science , vol.275 , pp. 805-807
    • Gu, D.1    Philander, S.2
  • 15
    • 0036612497 scopus 로고    scopus 로고
    • A generalized transport theory: Water-mass composition and age
    • Haine, T. W. M., and T. M. Hall (2002), A generalized transport theory: Water-mass composition and age, J. Phys. Oceanogr., 32, 1932-1946.
    • (2002) J. Phys. Oceanogr , vol.32 , pp. 1932-1946
    • Haine, T.W.M.1    Hall, T.M.2
  • 17
    • 84886844227 scopus 로고    scopus 로고
    • Heimbach, P., C. Hill, and R. Giering (2002), Automatic generation of efficient adjoint code for a parallel Navier-Stokes solver, in Proceedings of the International Conference on Computational Science - ICCS 2002, edited by J. J. Dongarra, P. M. A. Sloot, and C. J. K. Tan, pp. 1019-1028, Springer, New York.
    • Heimbach, P., C. Hill, and R. Giering (2002), Automatic generation of efficient adjoint code for a parallel Navier-Stokes solver, in Proceedings of the International Conference on Computational Science - ICCS 2002, edited by J. J. Dongarra, P. M. A. Sloot, and C. J. K. Tan, pp. 1019-1028, Springer, New York.
  • 18
    • 24044449269 scopus 로고    scopus 로고
    • An efficient exact adjoint of the parallel MIT general circulation model, generated via automatic differentiation
    • Heimbach, P., C. Hill, and R. Giering (2005), An efficient exact adjoint of the parallel MIT general circulation model, generated via automatic differentiation, Future Gen. Comput. Syst., 21, 1356-1371.
    • (2005) Future Gen. Comput. Syst , vol.21 , pp. 1356-1371
    • Heimbach, P.1    Hill, C.2    Giering, R.3
  • 19
    • 0034319061 scopus 로고    scopus 로고
    • Transit-time and tracer-age distributions in geophysical flows
    • Holzer, M., and T. M. Hall (2000), Transit-time and tracer-age distributions in geophysical flows, J. Atmos. Sci., 57, 3539-3558.
    • (2000) J. Atmos. Sci , vol.57 , pp. 3539-3558
    • Holzer, M.1    Hall, T.M.2
  • 20
    • 33845615785 scopus 로고    scopus 로고
    • The diffusive ocean conveyor
    • doi:10.1029/2006GL026232
    • Holzer, M., and F. W. Primeau (2006), The diffusive ocean conveyor, Geophys. Res. Lett., 33, L14618, doi:10.1029/2006GL026232.
    • (2006) Geophys. Res. Lett , vol.33
    • Holzer, M.1    Primeau, F.W.2
  • 22
    • 1342347574 scopus 로고    scopus 로고
    • Inverse modeling of atmospheric carbon dioxide fluxes
    • Kaminski, T., and M. Heimann (2001), Inverse modeling of atmospheric carbon dioxide fluxes, Science, 294, 259.
    • (2001) Science , vol.294 , pp. 259
    • Kaminski, T.1    Heimann, M.2
  • 23
    • 84880353882 scopus 로고    scopus 로고
    • Efficient sensitivities for the spin-up phase
    • Automatic Differentiation: Applications, Theory, and Implementations, edited by H. M. Bücker et al, pp, Springer, New York
    • Kaminski, T., R. Giering, and M. Voßbeck (2005), Efficient sensitivities for the spin-up phase, in Automatic Differentiation: Applications, Theory, and Implementations, Lecture Notes Comput. Sci. Eng., vol. 50, edited by H. M. Bücker et al., pp. 283-291, Springer, New York.
    • (2005) Lecture Notes Comput. Sci. Eng , vol.50 , pp. 283-291
    • Kaminski, T.1    Giering, R.2    Voßbeck, M.3
  • 27
    • 10444274066 scopus 로고    scopus 로고
    • Accelerated simulation of passive tracers in ocean circulation models
    • Hooke Inst. Oxford Univ, Oxford, U.K
    • Khatiwala, S., M. Visbeck, and M. Cane (2005), Accelerated simulation of passive tracers in ocean circulation models, Ocean Modell. 9, pp. 51-69, Hooke Inst. Oxford Univ., Oxford, U.K.
    • (2005) Ocean Modell. 9 , pp. 51-69
    • Khatiwala, S.1    Visbeck, M.2    Cane, M.3
  • 28
    • 0348198275 scopus 로고    scopus 로고
    • Jacobian-free Newton-Krylov methods: A survey of approaches and applications
    • Knoll, D. A., and D. E. Keyes (2004), Jacobian-free Newton-Krylov methods: A survey of approaches and applications, J. Comput. Phys., 193, 357-397.
    • (2004) J. Comput. Phys , vol.193 , pp. 357-397
    • Knoll, D.A.1    Keyes, D.E.2
  • 29
    • 34249729704 scopus 로고    scopus 로고
    • Sensitivity and optimization study of a biogeochemistry ocean model using an implicit solver and in-situ phosphate data
    • doi:10.1029/2005GB002631
    • Kwon, E. Y., and F. Primeau (2006), Sensitivity and optimization study of a biogeochemistry ocean model using an implicit solver and in-situ phosphate data, Global Biogeochem. Cycles, 20, GB4009, doi:10.1029/2005GB002631.
    • (2006) Global Biogeochem. Cycles , vol.20
    • Kwon, E.Y.1    Primeau, F.2
  • 30
    • 0028591570 scopus 로고
    • Oceanic vertical mixing: A review and a model with a nonlocal boundary layer parameterization
    • Large, W. G., J. C. McWilliams, and S. C. Doney (1994), Oceanic vertical mixing: A review and a model with a nonlocal boundary layer parameterization, Rev. Geophys., 32, 363-403.
    • (1994) Rev. Geophys , vol.32 , pp. 363-403
    • Large, W.G.1    McWilliams, J.C.2    Doney, S.C.3
  • 31
    • 0003353537 scopus 로고    scopus 로고
    • World Ocean Database 1998
    • NOAA, Silver Spring, Md
    • Levitus, S., et al. (1998). World Ocean Database 1998, NOAA Atlas NESDIS 18, NOAA, Silver Spring, Md.
    • (1998) NOAA Atlas NESDIS 18
    • Levitus, S.1
  • 32
    • 0038621899 scopus 로고    scopus 로고
    • SuperLU_DIST: A scalable distributed-memory sparse direct solver for unsymmetric linear systems
    • Li, X. S., and J. W. Demmel (2003), SuperLU_DIST: A scalable distributed-memory sparse direct solver for unsymmetric linear systems, Trans. Math. Software, 29, 110-140.
    • (2003) Trans. Math. Software , vol.29 , pp. 110-140
    • Li, X.S.1    Demmel, J.W.2
  • 33
    • 2342606944 scopus 로고    scopus 로고
    • An adjoint sensitivity study of chlorofluorocarbons in the North Atlantic
    • doi:10.1029/2003JC002014
    • Li, X., and C. Wunsch (2004), An adjoint sensitivity study of chlorofluorocarbons in the North Atlantic, J. Geophys. Res., 109, C01007, doi:10.1029/2003JC002014.
    • (2004) J. Geophys. Res , vol.109
    • Li, X.1    Wunsch, C.2
  • 34
    • 17144446569 scopus 로고    scopus 로고
    • Interannual variability in atmospheric mineral aerosols from a 22-year model simulation and observational data
    • doi:10.1029/2002JD002821
    • Mahowald, N., C. Lou, J. del Corral, and C. Zender (2003), Interannual variability in atmospheric mineral aerosols from a 22-year model simulation and observational data, J. Geophys. Res., 108(D12), 4352, doi:10.1029/2002JD002821.
    • (2003) J. Geophys. Res , vol.108 , Issue.D12 , pp. 4352
    • Mahowald, N.1    Lou, C.2    del Corral, J.3    Zender, C.4
  • 36
    • 0030762883 scopus 로고    scopus 로고
    • A finite-volume, incompressible navier-stokes model for studies of the ocean on parallel computers
    • Marshall, J., A. Adcroft, C. Hill, L. Perelman, and C. Heisey (1997), A finite-volume, incompressible navier-stokes model for studies of the ocean on parallel computers, J. Geophys. Res., 102, 5733-5752.
    • (1997) J. Geophys. Res , vol.102 , pp. 5733-5752
    • Marshall, J.1    Adcroft, A.2    Hill, C.3    Perelman, L.4    Heisey, C.5
  • 37
    • 36749023431 scopus 로고    scopus 로고
    • Orr, J. C., J. Dutay, R. G. Najjar, J. Bullister, and P. Brockmann (1999a), CFC-HOWTO: Internal OCMIP Report, technical report, Laboratoire des Sciences du Climat et l'Environnement, CEA Saclay, Gif-sur-Yvette, France.
    • Orr, J. C., J. Dutay, R. G. Najjar, J. Bullister, and P. Brockmann (1999a), CFC-HOWTO: Internal OCMIP Report, technical report, Laboratoire des Sciences du Climat et l'Environnement, CEA Saclay, Gif-sur-Yvette, France.
  • 38
    • 36749091120 scopus 로고    scopus 로고
    • Orr, J. C., R. G. Najjar, C. L. Sabine, and F. Joos (1999b), Abiotic-HOWTO: Internal OCMIP Report, technical report, Laboratoire des Sciences du Climat et l'Environnement, CEA Saclay, Gif-sur-Yvette, France.
    • Orr, J. C., R. G. Najjar, C. L. Sabine, and F. Joos (1999b), Abiotic-HOWTO: Internal OCMIP Report, technical report, Laboratoire des Sciences du Climat et l'Environnement, CEA Saclay, Gif-sur-Yvette, France.
  • 39
    • 27644513842 scopus 로고    scopus 로고
    • Decoupling of iron and phosphate in the global ocean
    • doi:10.1029/2004GB002280
    • Parekh, P., M. J. Follows, and E. A. Boyle (2005), Decoupling of iron and phosphate in the global ocean, Global Biogeochem. Cycles, 19, GB2020, doi:10.1029/2004GB002280.
    • (2005) Global Biogeochem. Cycles , vol.19
    • Parekh, P.1    Follows, M.J.2    Boyle, E.A.3
  • 40
    • 18844386039 scopus 로고    scopus 로고
    • Characterizing transport between the surface mixed layer and the ocean interior with a forward and adjoint global ocean transport model
    • doi:10.1175/JPO2699.1
    • Primeau, F. (2005), Characterizing transport between the surface mixed layer and the ocean interior with a forward and adjoint global ocean transport model, J. Phys. Oceanogr., 35, doi:10.1175/JPO2699.1.
    • (2005) J. Phys. Oceanogr , pp. 35
    • Primeau, F.1
  • 43
    • 85040251343 scopus 로고    scopus 로고
    • Applying the adjoint method for biogeochemical modeling: Export of particulate organic matter in the world ocean
    • edited by P. Kasibhatla et al, pp, AGU, Washington, D. C
    • Schlitzer, R. (1999), Applying the adjoint method for biogeochemical modeling: Export of particulate organic matter in the world ocean, in Inverse Methods in Global Biogeochemical Cycles, Geophys. Monogr. Ser., vol. 114, edited by P. Kasibhatla et al., pp. 107-124, AGU, Washington, D. C.
    • (1999) Inverse Methods in Global Biogeochemical Cycles, Geophys. Monogr. Ser , vol.114 , pp. 107-124
    • Schlitzer, R.1
  • 44
    • 3543003482 scopus 로고    scopus 로고
    • Estimating air-sea fluxes of heat, freshwater, and momentum through global ocean data assimilation
    • doi:10.1029/2003JC002082
    • Stammer, D., K. Ueyoshi, A. Köhl, W. G. Large, S. A. Josey, and C. Wunsch (2004), Estimating air-sea fluxes of heat, freshwater, and momentum through global ocean data assimilation, J. Geophys. Res., 109, C05023, doi:10.1029/2003JC002082.
    • (2004) J. Geophys. Res , vol.109
    • Stammer, D.1    Ueyoshi, K.2    Köhl, A.3    Large, W.G.4    Josey, S.A.5    Wunsch, C.6
  • 45
    • 0000289498 scopus 로고
    • Tracer dating and ocean ventilation
    • Thiele, G., and J. L. Sarmiento (1990), Tracer dating and ocean ventilation, J. Geophys. Res., 95, 9377-9391.
    • (1990) J. Geophys. Res , vol.95 , pp. 9377-9391
    • Thiele, G.1    Sarmiento, J.L.2
  • 46
    • 0024319349 scopus 로고
    • Simulations of radiocarbon in a coarse resolution world ocean model: I. Steady state prebomb distributions
    • Toggweiler, J. R., K. Dixon, and K. Bryan (1989), Simulations of radiocarbon in a coarse resolution world ocean model: I. Steady state prebomb distributions, J. Geophys. Res., 94, 8217-8242.
    • (1989) J. Geophys. Res , vol.94 , pp. 8217-8242
    • Toggweiler, J.R.1    Dixon, K.2    Bryan, K.3
  • 47
    • 0003827471 scopus 로고
    • Upper waters of the intertropical Pacific Ocean
    • Johns Hopkins Univ, Baltimore, Md
    • Tsuchiya, M. (1968), Upper waters of the intertropical Pacific Ocean, technical report, Johns Hopkins Univ., Baltimore, Md.
    • (1968) technical report
    • Tsuchiya, M.1
  • 48
    • 0026446585 scopus 로고
    • Relationship between wind speed and gas exchange over the ocean
    • Wanninkhof, R. (1992), Relationship between wind speed and gas exchange over the ocean, J. Geophys. Res., 97, 7373-7382.
    • (1992) J. Geophys. Res , vol.97 , pp. 7373-7382
    • Wanninkhof, R.1
  • 49
    • 0041823368 scopus 로고    scopus 로고
    • Relationships among tracer ages
    • doi:10.1029/ 2002JC001325
    • Waugh, D. W., T. M. Hall, and T. W. N. Haine (2003), Relationships among tracer ages, J. Geophys. Res., 108(C5), 3139, doi:10.1029/ 2002JC001325.
    • (2003) J. Geophys. Res , vol.108 , Issue.C5 , pp. 3139
    • Waugh, D.W.1    Hall, T.M.2    Haine, T.W.N.3
  • 50
    • 5644254723 scopus 로고    scopus 로고
    • Transport times and anthropogenic carbon in the subpolar North Atlantic Ocean
    • doi:10.1016/j.dsr.2004.06.011
    • Waugh, D. W., T. W. N. Haine, and T. M. Hall (2004), Transport times and anthropogenic carbon in the subpolar North Atlantic Ocean, Deep Sea Res., Part 1, 15, 1475-1491, doi:10.1016/j.dsr.2004.06.011.
    • (2004) Deep Sea Res., Part , vol.1 , Issue.15 , pp. 1475-1491
    • Waugh, D.W.1    Haine, T.W.N.2    Hall, T.M.3
  • 52
    • 34248645164 scopus 로고    scopus 로고
    • Practical global oceanic state estimation
    • Wunsch, C., and P. Heimbach (2007), Practical global oceanic state estimation, Physica D, 230, 197-208.
    • (2007) Physica D , vol.230 , pp. 197-208
    • Wunsch, C.1    Heimbach, P.2


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