메뉴 건너뛰기




Volumn 61, Issue 12, 2007, Pages 2849-2860

Adaptive population differentiation in phenology across a latitudinal gradient in European aspen (Populus tremula, L.): A comparison of neutral markers, candidate genes and phenotypic traits

Author keywords

Clinal variation; Gene flow; Genetic markers; Local adaptation; Population structure

Indexed keywords

MICROSATELLITE DNA;

EID: 36549060068     PISSN: 00143820     EISSN: 15585646     Source Type: Journal    
DOI: 10.1111/j.1558-5646.2007.00230.x     Document Type: Article
Times cited : (149)

References (63)
  • 1
    • 84966190064 scopus 로고
    • Evolution in closely adjacent plant populations. VI. Manifold effects of gene flow
    • Antonovics, J. 1968. Evolution in closely adjacent plant populations. VI. Manifold effects of gene flow. Heredity 23 : 507 524.
    • (1968) Heredity , vol.23 , pp. 507-524
    • Antonovics, J.1
  • 2
    • 84970062289 scopus 로고
    • Evolution in closely adjacent plant populations. 8. Clinal patterns at a mine boundary
    • and
    • Antonovics, J., and A. D. Bradshaw. 1970. Evolution in closely adjacent plant populations. 8. Clinal patterns at a mine boundary. Heredity 25 : 349 362.
    • (1970) Heredity , vol.25 , pp. 349-362
    • Antonovics, J.1    Bradshaw, A.D.2
  • 3
    • 0036010831 scopus 로고    scopus 로고
    • Statistical properties of population differentiation estimators under stepwise mutation in a finite island model
    • and
    • Balloux, F., and J. Goudet. 2002. Statistical properties of population differentiation estimators under stepwise mutation in a finite island model. Mol. Ecol. 11 771 884.
    • (2002) Mol. Ecol. , vol.11 , pp. 771-884
    • Balloux, F.1    Goudet, J.2
  • 4
    • 22744447651 scopus 로고    scopus 로고
    • ST tell us? Trends Evol
    • ST tell us? Trends Evol. Ecol. 20 : 435 440.
    • (2005) Ecol. , vol.20 , pp. 435-440
    • Beaumont, M.A.1
  • 5
    • 0033555906 scopus 로고    scopus 로고
    • Tandem repeats finder: A program to analyze DNA sequences
    • Benson, G. 1999. Tandem repeats finder: a program to analyze DNA sequences. Nucleic Acids Res. 27 : 573 580.
    • (1999) Nucleic Acids Res. , vol.27 , pp. 573-580
    • Benson, G.1
  • 8
    • 0034958416 scopus 로고    scopus 로고
    • M13-tailed primers improve the readability and usability of microsatellite analyses performed with two different allele-sizing methods
    • and
    • Boutin-Ganache, I., M. Raposo, M. Raymond, and C. F. Deschepper. 2001. M13-tailed primers improve the readability and usability of microsatellite analyses performed with two different allele-sizing methods. BioTechniques 31 : 25 28.
    • (2001) BioTechniques , vol.31 , pp. 25-28
    • Boutin-Ganache, I.1    Raposo, M.2    Raymond, M.3    Deschepper, C.F.4
  • 11
    • 33847668722 scopus 로고    scopus 로고
    • Microsatellite null alleles and estimation of population differentiation
    • and
    • Chapuis, M-P., and A. Estoup. 2007. Microsatellite null alleles and estimation of population differentiation. Mol. Biol. Evol. 24 : 621 631.
    • (2007) Mol. Biol. Evol. , vol.24 , pp. 621-631
    • Chapuis, M.-P.1    Estoup, A.2
  • 12
    • 0031901554 scopus 로고    scopus 로고
    • Measures of divergence between populations and the effect of forces that reduce variability
    • Charlesworth, B. 1998. Measures of divergence between populations and the effect of forces that reduce variability. Mol. Biol. Evol. 15 : 538 543.
    • (1998) Mol. Biol. Evol. , vol.15 , pp. 538-543
    • Charlesworth, B.1
  • 13
    • 21244461223 scopus 로고    scopus 로고
    • Allelic and population variation of microsatellite loci in aspen (Populus tremuloides)
    • Cole, C. 2005. Allelic and population variation of microsatellite loci in aspen (Populus tremuloides). New Phytol. 167 : 155 164.
    • (2005) New Phytol. , vol.167 , pp. 155-164
    • Cole, C.1
  • 14
    • 7244224987 scopus 로고    scopus 로고
    • BAPS 2: Enhanced possibilities for the analysis of genetic population structure
    • and
    • Corander, J., P. Waldmann, P. Marttinen, and M. J. Sillanpää. 2004. BAPS 2: enhanced possibilities for the analysis of genetic population structure. Bioinformatics 20 : 2363 2369.
    • (2004) Bioinformatics , vol.20 , pp. 2363-2369
    • Corander, J.1    Waldmann, P.2    Marttinen, P.3    Sillanpää, M.J.4
  • 15
    • 0031812534 scopus 로고    scopus 로고
    • Isolation and characterization of microsatellites in trembling aspen (Populus tremuloides)
    • and
    • Dayanandan, S., O. Rajora, and K. Bawa. 1998. Isolation and characterization of microsatellites in trembling aspen (Populus tremuloides). Theor. Appl. Genet. 96 : 950 956.
    • (1998) Theor. Appl. Genet. , vol.96 , pp. 950-956
    • Dayanandan, S.1    Rajora, O.2    Bawa, K.3
  • 16
    • 0036149896 scopus 로고    scopus 로고
    • Low nucleotide diversity at the pal1 locus in the widely distributed Pinus sylvestris
    • and
    • Dvornyk, V., A. Sirviö, M. Mikkonen, and O. Savolainen. 2002. Low nucleotide diversity at the pal1 locus in the widely distributed Pinus sylvestris. Mol. Biol. Evol. 19 : 179 188.
    • (2002) Mol. Biol. Evol. , vol.19 , pp. 179-188
    • Dvornyk, V.1    Sirviö, A.2    Mikkonen, M.3    Savolainen, O.4
  • 18
    • 0036931981 scopus 로고    scopus 로고
    • Daylength and spatial expression of a gibberellin 20-oxidase isolated from hybrid aspen (Populus tremula L. × P. tremuloides Michx.)
    • and
    • Eriksson, M. E., and T. Moritz. 2002. Daylength and spatial expression of a gibberellin 20-oxidase isolated from hybrid aspen (Populus tremula L. × P. tremuloides Michx.). Planta 214 : 920 930.
    • (2002) Planta , vol.214 , pp. 920-930
    • Eriksson, M.E.1    Moritz, T.2
  • 19
    • 0033965570 scopus 로고    scopus 로고
    • Quantitative trait loci and candidate gene mapping of bud set and bud flush in Populus
    • and
    • Frewen, B. E., T. H. Chen, G. T. Howe, J. Davis, A. Rohde, W. Boerjan, and H. D. Bradshaw Jr. 2000. Quantitative trait loci and candidate gene mapping of bud set and bud flush in Populus. Genetics 154 : 837 845.
    • (2000) Genetics , vol.154 , pp. 837-845
    • Frewen, B.E.1    Chen, T.H.2    Howe, G.T.3    Davis, J.4    Rohde, A.5    Boerjan, W.6    Bradshaw Jr., H.D.7
  • 20
    • 34748873806 scopus 로고    scopus 로고
    • An excess of non synonymous polymorphism and extensive haplotype structure at the PtABI1B locus in European Aspen (Populus tremula): A case of balancing selection in an obligately outcrossing plant?
    • and. in press. doi:.
    • Garcia, M. V., and P. K. Ingvarsson. 2007. An excess of non synonymous polymorphism and extensive haplotype structure at the PtABI1B locus in European Aspen (Populus tremula): a case of balancing selection in an obligately outcrossing plant? Heredity in press doi :.
    • (2007) Heredity
    • Garcia, M.V.1    Ingvarsson, P.K.2
  • 21
    • 0038788126 scopus 로고    scopus 로고
    • Nucleotide diversity at two phytochrome loci along a latitudinal cline in Pinus sylvestris
    • and
    • Garcia-Gil, M. R., M. Mikkonen, and O. Savolainen. 2003. Nucleotide diversity at two phytochrome loci along a latitudinal cline in Pinus sylvestris. Mol. Ecol. 12 : 1195 1206.
    • (2003) Mol. Ecol. , vol.12 , pp. 1195-1206
    • Garcia-Gil, M.R.1    Mikkonen, M.2    Savolainen, O.3
  • 23
    • 0035706404 scopus 로고    scopus 로고
    • Rapid evolution of wing size clines in Drosophila subobscura
    • and
    • Gilchrist, G. W., R. B. Huey, and L. Serra. 2001. Rapid evolution of wing size clines in Drosophila subobscura. Genetica 112-113 : 273 286.
    • (2001) Genetica , vol.112-113 , pp. 273-286
    • Gilchrist, G.W.1    Huey, R.B.2    Serra, L.3
  • 24
    • 0035004277 scopus 로고    scopus 로고
    • Nonclinality of molecular variation implicates selection in maintaining a morphological cline of Drosophila melanogaster
    • and
    • Gockel, J., W. J. Kennington, A. A. Hoffmann, D. B. Goldstein, and L. Partridge. 2001. Nonclinality of molecular variation implicates selection in maintaining a morphological cline of Drosophila melanogaster. Genetics 158 : 319 323.
    • (2001) Genetics , vol.158 , pp. 319-323
    • Gockel, J.1    Kennington, W.J.2    Hoffmann, A.A.3    Goldstein, D.B.4    Partridge, L.5
  • 25
    • 85007320774 scopus 로고
    • FSTAT version 1.2: A computer program to calculate F-statistics
    • Goudet, J. 1995. FSTAT version 1.2: a computer program to calculate F-statistics. J. Heredity 86 : 485 486.
    • (1995) J. Heredity , vol.86 , pp. 485-486
    • Goudet, J.1
  • 26
    • 33644775668 scopus 로고    scopus 로고
    • ST, an estimator of population differentiation for quantitative traits
    • and
    • ST, an estimator of population differentiation for quantitative traits. Genetics 172 : 1337 1347.
    • (2006) Genetics , vol.172 , pp. 1337-1347
    • Goudet, J.1    Büchi, L.2
  • 28
    • 1642311939 scopus 로고    scopus 로고
    • From genotype to phenotype: Unraveling the complexities of cold adaptation in forest trees
    • and
    • Howe, G. T., A. N. Aitken, D. B. Neale, K. D. Jermstad, N. C. Wheeler, and T. H. H. Chen. 2003. From genotype to phenotype: unraveling the complexities of cold adaptation in forest trees. Can. J. Bot., 81 : 1247 1266.
    • (2003) Can. J. Bot. , vol.81 , pp. 1247-1266
    • Howe, G.T.1    Aitken, A.N.2    Neale, D.B.3    Jermstad, K.D.4    Wheeler, N.C.5    Chen, T.H.H.6
  • 29
    • 15544362769 scopus 로고    scopus 로고
    • Nucleotide polymorphism and linkage disequilbrium within and among natural populations of European Aspen (Populus tremula L., Salicaceae)
    • Ingvarsson, P. K. 2005. Nucleotide polymorphism and linkage disequilbrium within and among natural populations of European Aspen (Populus tremula L., Salicaceae). Genetics 169 : 945 953.
    • (2005) Genetics , vol.169 , pp. 945-953
    • Ingvarsson, P.K.1
  • 30
    • 33645229343 scopus 로고    scopus 로고
    • Clinal variation in phyB2, a candidate gene for day-length-induced growth cessation and bud set, across a latitudinal gradient in European aspen (Populus tremula)
    • and
    • Ingvarsson, P. K., M. V. Garcia, D. Hall, V. Luquez, and S. Jansson. 2006. Clinal variation in phyB2, a candidate gene for day-length-induced growth cessation and bud set, across a latitudinal gradient in European aspen (Populus tremula). Genetics 172 : 1845 1853.
    • (2006) Genetics , vol.172 , pp. 1845-1853
    • Ingvarsson, P.K.1    Garcia, M.V.2    Hall, D.3    Luquez, V.4    Jansson, S.5
  • 31
    • 75949146309 scopus 로고
    • The number of alleles that can be maintained in a finite population
    • and
    • Kimura, M., and J. F. Crow. 1964. The number of alleles that can be maintained in a finite population. Genetics 49 : 725 738.
    • (1964) Genetics , vol.49 , pp. 725-738
    • Kimura, M.1    Crow, J.F.2
  • 32
    • 0026591962 scopus 로고
    • Neutral theory of quantitative genetic variance in an island model with local extinction and colonization
    • Lande, R. 1992. Neutral theory of quantitative genetic variance in an island model with local extinction and colonization. Evolution 46 : 381 389.
    • (1992) Evolution , vol.46 , pp. 381-389
    • Lande, R.1
  • 33
    • 0031956327 scopus 로고    scopus 로고
    • Differentiation of allelic frequencies at quantitative trait loci affecting locally adaptive traits
    • Latta, R. G. 1998. Differentiation of allelic frequencies at quantitative trait loci affecting locally adaptive traits. Am. Nat. 151 : 283 292.
    • (1998) Am. Nat. , vol.151 , pp. 283-292
    • Latta, R.G.1
  • 34
    • 0043210649 scopus 로고    scopus 로고
    • Genetic variability at neutral markers, quantitative trait loci and trait in a subdivided population under selection
    • and
    • Le Corre, V., and A. Kremer. 2003. Genetic variability at neutral markers, quantitative trait loci and trait in a subdivided population under selection. Genetics 164 : 1205 1219.
    • (2003) Genetics , vol.164 , pp. 1205-1219
    • Le Corre, V.1    Kremer, A.2
  • 35
    • 0021613577 scopus 로고
    • Detecting population differences in quantitative characters as opposed to gene frequencies
    • Lewontin, R. C. 1984. Detecting population differences in quantitative characters as opposed to gene frequencies. Am. Nat. 123 : 115 124.
    • (1984) Am. Nat. , vol.123 , pp. 115-124
    • Lewontin, R.C.1
  • 36
    • 0030512864 scopus 로고    scopus 로고
    • Evolutionary significance of local genetic differentiation in plants
    • and
    • Linhart, Y. B., and M. C. Grant. 1996. Evolutionary significance of local genetic differentiation in plants. Annu. Rev. Ecol. Sys. 27 : 237 277.
    • (1996) Annu. Rev. Ecol. Sys. , vol.27 , pp. 237-277
    • Linhart, Y.B.1    Grant, M.C.2
  • 38
    • 0000806544 scopus 로고
    • The divergence of neutral quantitative characters among partially isolated populations
    • Lynch, M. 1988. The divergence of neutral quantitative characters among partially isolated populations. Evolution 42 : 455 466.
    • (1988) Evolution , vol.42 , pp. 455-466
    • Lynch, M.1
  • 40
    • 0036603630 scopus 로고    scopus 로고
    • Adaptive population divergence: Markers, QTL and traits
    • and
    • McKay, J. K., and R. G. Latta. 2002. Adaptive population divergence: markers, QTL and traits. Trends Ecol. Evol. 17 : 285 291.
    • (2002) Trends Ecol. Evol. , vol.17 , pp. 285-291
    • McKay, J.K.1    Latta, R.G.2
  • 41
    • 0035670347 scopus 로고    scopus 로고
    • Comparison of genetic differentiation at marker loci and quantitative traits
    • and
    • Merilä, J., and P. Crnokrak. 2001. Comparison of genetic differentiation at marker loci and quantitative traits. J. Evol. Biol. 14 : 892 903.
    • (2001) J. Evol. Biol. , vol.14 , pp. 892-903
    • Merilä, J.1    Crnokrak, P.2
  • 43
    • 3042745450 scopus 로고    scopus 로고
    • Association genetics of complex traits in conifers
    • and
    • Neale, D. B., and O. Savolainen. 2004. Association genetics of complex traits in conifers. Trends Plant Sci. 9 : 325 330.
    • (2004) Trends Plant Sci. , vol.9 , pp. 325-330
    • Neale, D.B.1    Savolainen, O.2
  • 44
    • 32544451095 scopus 로고    scopus 로고
    • ST estimates: Problems and some solutions
    • and
    • ST estimates: problems and some solutions. Genetics 171 : 1331 1339.
    • (2005) Genetics , vol.171 , pp. 1331-1339
    • O'Hara, R.B.1    Merilä, J.2
  • 45
    • 0015765702 scopus 로고
    • The model of mutation appropriate to estimate the number of electrophoretically detectable alleles in a genetic population
    • and
    • Ohta, T., and M. Kimura. 1973. The model of mutation appropriate to estimate the number of electrophoretically detectable alleles in a genetic population. Genet. Res. 22 : 201 204.
    • (1973) Genet. Res. , vol.22 , pp. 201-204
    • Ohta, T.1    Kimura, M.2
  • 46
    • 0034118493 scopus 로고    scopus 로고
    • Inference of population structure from multilocus genotype data
    • and
    • Pritchard, J. K., M. Stephens, and P. Donnelly. 2000. Inference of population structure from multilocus genotype data. Genetics 155 : 945 959.
    • (2000) Genetics , vol.155 , pp. 945-959
    • Pritchard, J.K.1    Stephens, M.2    Donnelly, P.3
  • 47
    • 0034038770 scopus 로고    scopus 로고
    • Microsatellite DNA markers in Populus tremuloides
    • and
    • Rahman, M., S. Dayanandan, and O. Rajora. 2000. Microsatellite DNA markers in Populus tremuloides. Genome 43 : 293 297.
    • (2000) Genome , vol.43 , pp. 293-297
    • Rahman, M.1    Dayanandan, S.2    Rajora, O.3
  • 48
    • 0034926475 scopus 로고    scopus 로고
    • How closely correlated are molecular and quantitative measures of genetic variation? a meta-analysis
    • and
    • Reed, D. H., and R. Frankham. 2001. How closely correlated are molecular and quantitative measures of genetic variation? A meta-analysis. Evolution 55 : 1095 1103.
    • (2001) Evolution , vol.55 , pp. 1095-1103
    • Reed, D.H.1    Frankham, R.2
  • 49
    • 0001551343 scopus 로고
    • Early selection in Pinus ponderosa: Compromises between growth potential and growth rhythm in developing breeding strategies
    • Rehfeldt, G. E. 1992. Early selection in Pinus ponderosa: compromises between growth potential and growth rhythm in developing breeding strategies. For. Sci. 38 : 661 677.
    • (1992) For. Sci. , vol.38 , pp. 661-677
    • Rehfeldt, G.E.1
  • 50
    • 0032764124 scopus 로고    scopus 로고
    • Genetic response to climate in Pinus contorta: Niche breadth, climate change, and reforestation
    • and
    • Rehfeldt, G. E., C. C. Ying, D. L. Spittlehouse, and D. A. Hamilton Jr. 1999. Genetic response to climate in Pinus contorta: niche breadth, climate change, and reforestation. Ecol. Mongr. 69 : 375 407.
    • (1999) Ecol. Mongr. , vol.69 , pp. 375-407
    • Rehfeldt, G.E.1    Ying, C.C.2    Spittlehouse, D.L.3    Hamilton Jr., D.A.4
  • 51
    • 0029983280 scopus 로고    scopus 로고
    • Equilibrium values of measures of population subdivision for stepwise mutation processes
    • Rousset, F. 1996. Equilibrium values of measures of population subdivision for stepwise mutation processes. Genetics 142 : 1357 1362.
    • (1996) Genetics , vol.142 , pp. 1357-1362
    • Rousset, F.1
  • 52
    • 0022169067 scopus 로고
    • Gene flow in natural populations
    • Slatkin, M. 1985. Gene flow in natural populations. Ann. Rev. Ecol. Syst. 16 : 393 430.
    • (1985) Ann. Rev. Ecol. Syst. , vol.16 , pp. 393-430
    • Slatkin, M.1
  • 53
    • 0028816747 scopus 로고
    • A measure of population subdivision based on microsatellite allele frequencies
    • Slatkin, M. 1995. A measure of population subdivision based on microsatellite allele frequencies. Genetics 139 : 457 465.
    • (1995) Genetics , vol.139 , pp. 457-465
    • Slatkin, M.1
  • 54
    • 0027370038 scopus 로고
    • Population structure in daphnia obtusa: Quantitative genetic and allozymic variation
    • Spitze, K. 1993. Population structure in daphnia obtusa: quantitative genetic and allozymic variation. Genetics 135 : 367 374.
    • (1993) Genetics , vol.135 , pp. 367-374
    • Spitze, K.1
  • 55
    • 24944537983 scopus 로고    scopus 로고
    • Clone identification and clonal structure of the European aspen (Populus tremula)
    • and
    • Suvanto, L. I., and T. B. Latva-Karjanmaa. 2005. Clone identification and clonal structure of the European aspen (Populus tremula). Mol. Ecol. 14 : 2851 2860.
    • (2005) Mol. Ecol. , vol.14 , pp. 2851-2860
    • Suvanto, L.I.1    Latva-Karjanmaa, T.B.2
  • 56
    • 84977255802 scopus 로고
    • The genotypical response of the plant species to the habitat
    • Turesson, G. 1922. The genotypical response of the plant species to the habitat. Hereditas 3 : 211 350.
    • (1922) Hereditas , vol.3 , pp. 211-350
    • Turesson, G.1
  • 58
    • 4344606590 scopus 로고    scopus 로고
    • Micro-checker: Software for identifying and correcting genotyping errors in microsatellite data
    • and
    • Van Oosterhout, C., W. F. Hutchinson, D. P. M. Wills, and P. Shipley. 2004. Micro-checker: software for identifying and correcting genotyping errors in microsatellite data. Mol. Ecol. Notes 4 : 535 538.
    • (2004) Mol. Ecol. Notes , vol.4 , pp. 535-538
    • Van Oosterhout, C.1    Hutchinson, W.F.2    Wills, D.P.M.3    Shipley, P.4
  • 60
    • 20444480694 scopus 로고    scopus 로고
    • Comparing Bayesian estimates of genetic differentiation of molecular markers and quantitative traits: An application to Pinus sylvestris
    • and
    • Waldmann P., M. R. Garcia-Gil, and M. J. Sillanpää. 2005. Comparing Bayesian estimates of genetic differentiation of molecular markers and quantitative traits: an application to Pinus sylvestris. Heredity 94 : 623 629.
    • (2005) Heredity , vol.94 , pp. 623-629
    • Waldmann, P.1    Garcia-Gil, M.R.2    Sillanpää, M.J.3
  • 61
    • 0033382484 scopus 로고    scopus 로고
    • Neutral additive genetic variance in a metapopulation
    • Whitlock, M. C. 1999. Neutral additive genetic variance in a metapopulation. Genet. Res. 74 : 215 221.
    • (1999) Genet. Res. , vol.74 , pp. 215-221
    • Whitlock, M.C.1
  • 62
    • 84890417804 scopus 로고
    • The genetical structure of populations
    • Wright, S. 1951. The genetical structure of populations. Ann. Eugenetics 15 : 323 354.
    • (1951) Ann. Eugenetics , vol.15 , pp. 323-354
    • Wright, S.1
  • 63
    • 0001726921 scopus 로고
    • The theoretical variance within and among subdivisions of a population that is in a steady state
    • Wright, S. 1952. The theoretical variance within and among subdivisions of a population that is in a steady state. Genetics 37 : 312 321.
    • (1952) Genetics , vol.37 , pp. 312-321
    • Wright, S.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.