Structure of the ribosomal interacting GTPase YjeQ from the enterobacterial species Salmonella typhimurium

Acta Crystallographica Section F: Structural Biology and Crystallization Communications

Volumn 63, Issue 11, 2007, Pages 922-928

  Nichols, C E ^a   Johnson, C ^b   Lamb, H K ^b   Lockyer, M ^c   Charles, I G ^d   Hawkins, A R ^b   Stammers, D K ^a  

^a UNIVERSITY OF OXFORD   (United Kingdom)

^b NEWCASTLE UNIVERSITY   (United Kingdom)

^c Arrow Therapeutics   (United Kingdom)

^d UNIVERSITY COLLEGE LONDON   (United Kingdom)

Author keywords

GTPase; Ribosome; YjeQ

Indexed keywords

GUANOSINE TRIPHOSPHATASE;

AMINO ACID SEQUENCE; ARTICLE; CALORIMETRY; CHEMISTRY; CRYSTALLIZATION; ENZYMOLOGY; METABOLISM; MOLECULAR GENETICS; SALMONELLA TYPHIMURIUM; SEQUENCE ALIGNMENT; THERMODYNAMICS; X RAY CRYSTALLOGRAPHY;

AMINO ACID SEQUENCE; CALORIMETRY; CRYSTALLIZATION; CRYSTALLOGRAPHY, X-RAY; GTP PHOSPHOHYDROLASES; MOLECULAR SEQUENCE DATA; SALMONELLA TYPHIMURIUM; SEQUENCE ALIGNMENT; THERMODYNAMICS;

BACILLUS SUBTILIS; BACTERIA (MICROORGANISMS); ENTEROBACTERIACEAE; ESCHERICHIA COLI; NEGIBACTERIA; SALMONELLA TYPHIMURIUM;

EID: 36248953879     PISSN: 17443091     EISSN: 17443091     Source Type: Journal    
DOI: 10.1107/S1744309107048609     Document Type: Article

References (29)

1. Brown, E. D. (2005). Biochem. Cell Biol. 83, 738-746.
2. Brown, J. et al. (2003). J. Appl. Cryst. 36, 315-318.
3. Brünger, A. T., Adams, P. D., Clore, G. M., DeLano, W. L., Gros, P., Grosse-Kunstleve, R. W., Jiang, J.-S., Kuszewski, J., Nilges, M., Pannu, N. S., Read, R. J., Rice, L. M., Simonson, T. & Warren, G. L. (1998). Acta Cryst. D54, 905-921.
4. Campbell, T. L., Daigle, D. M. & Brown, E. D. (2005). Biochem. J. 389, 843-852.
5. Chen, S. M., Takiff, H. E., Barber, A. M., Dubois, G. C., Bardwell, J. C. & Court, D. L. (1990). J. Biol. Chem. 265, 2888-2895.
6. Collaborative Computational Project, Number 4 (1994). Acta Cryst. D50, 760-763.
7. Cooper, A. (1998). Methods Mol. Biol. 88, 11-22.
8. Cooper, A. & Johnson, C. M. (1994). Methods Mol. Biol. 22, 137-150.
9. Daigle, D. M. & Brown, E. D. (2004). J. Bacteriol. 186, 1381-1387.
10. Daigle, D. M., Rossi, L., Berghuis, A. M., Aravind, L., Koonin, E. V. & Brown, E. D. (2002). Biochemistry, 41, 11109-11117.
11. Eargle, J., Wright, D. & Luthey-Schulten, Z. (2006). Bioinformatics, 22, 504-506.
12. Himeno, H., Hanawa-Suetsugu, K., Kimura, T., Takagi, K., Sugiyama, W., Shirata, S., Mikami, T., Odagiri, F., Osanai, Y., Watanabe, D., Goto, S., Kalachnyuk, L., Ushida, C. & Muto, A. (2004). Nucleic Acids Res. 32, 5303-5309.
13. Humphrey, W., Dalke, A. & Schulten, K. (1996). J. Mol. Graph. 14, 33-38.
14. Jones, T. A., Zou, J.-Y., Cowan, S. W. & Kjeldgaard, M. (1991). Acta Cryst. A47, 110-119.
15. Laskowski, R. A., MacArthur, M. W., Moss, D. S. & Thornton, J. M. (1993). J. Appl. Cryst. 26, 283-291.
16. Levdikov, V. M., Blagova, E. V., Brannigan, J. A., Cladiere, L., Antson, A. A., Isupov, M. N., Seror, S. J. & Wilkinson, A. J. (2004). J. Mol. Biol. 340, 767-782.
17. McCoy, A. J., Grosse-Kunstleve, R. W., Storoni, L. C. & Read, R. J. (2005). Acta Cryst. D61, 458-464.
18. Markowitz, V. M., Ivanova, N., Palaniappan, K., Szeto, E., Korzeniewski, F., Lykidis, A., Anderson, I., Mavromatis, K., Kunin, V., Garcia Martin, H., Dubchak, I., Hugenholtz, P. & Kyrpides, N. C. (2006). Bioinformatics, 22, e359-e367.
19. Nelson, K. E. et al. (1999). Nature (London), 399, 323-329.
20. Nichols, C. E., Johnson, C., Lockyer, M., Charles, I. G., Lamb, H. K., Hawkins, A. R. & Stammers, D. K. (2006). Proteins, 64, 111-123.
21. Nichols, C. E., Lamb, H. K., Lockyer, M., Charles, I. G., Pyne, S., Hawkins, A. R. & Stammers, D. K. (2007). Proteins, 68, 13-25.
22. Otwinowski, Z. (1993). Proceedings of the CCP4 Study Weekend. Data Collection and Processing, edited by L. Sawyer, N. Isaacs & S. Bailey, pp. 56-62. Warrington: Daresbury Laboratory.
23. Otwinowski, Z. & Minor, W. (1996). Methods Enzymol. 276, 307-326.
24. Shin, D. H., Lou, Y., Jancarik, J., Yokota, H., Kim, R. & Kim, S.-H. (2004). Proc. Natl Acad. Sci. USA, 101, 13198-13203.
25. Snel, B., Lehmann, G., Bork, P. & Huynen, M. A. (2000). Nucleic Acids Res. 28, 3442-3444.
26. Storoni, L. C., McCoy, A. J. & Read, R. J. (2004). Acta Cryst. D60, 432-438.
27. Terwilliger, T. (2004). J. Synchrotron Rad. 11, 49-52.
28. Terwilliger, T. C. (2003). Methods Enzymol. 374, 22-37.
29. Wiseman, T., Williston, S., Brandts, J. F. & Lin, L. N. (1989). Anal. Biochem. 179, 131-137.