-
1
-
-
0030281034
-
From gradients to stripes in Drosophila embryogenesis: Filling in the gaps
-
RIVERA-POMAR, R. & H. J̈ACKLE. 1996. From gradients to stripes in Drosophila embryogenesis: filling in the gaps. Trends Genet. 12: 478-483.
-
(1996)
Trends Genet
, vol.12
, pp. 478-483
-
-
RIVERA-POMAR, R.1
J̈ACKLE, H.2
-
2
-
-
0035928464
-
A logical analysis of the gap gene system
-
SANCHEZ, L. & D. THIEFFRY. 2001. A logical analysis of the gap gene system. J. Theor. Biol. 211: 115-141.
-
(2001)
J. Theor. Biol
, vol.211
, pp. 115-141
-
-
SANCHEZ, L.1
THIEFFRY, D.2
-
3
-
-
4644363054
-
Dynamical analysis of regulatory interactions in the gap gene system of Drosophila melanogaster
-
JAEGER, J., M. BLAGOV, D. KOSMAN, et al. 2004. Dynamical analysis of regulatory interactions in the gap gene system of Drosophila melanogaster. Genetics 167: 1721-1737.
-
(2004)
Genetics
, vol.167
, pp. 1721-1737
-
-
JAEGER, J.1
BLAGOV, M.2
KOSMAN, D.3
-
4
-
-
3142734333
-
Dynamic control of positional information in the early Drosophila embryo
-
JAEGER, J., S. SURKOVA, M. BLAGOV, et al. 2004. Dynamic control of positional information in the early Drosophila embryo. Nature 430: 368-371.
-
(2004)
Nature
, vol.430
, pp. 368-371
-
-
JAEGER, J.1
SURKOVA, S.2
BLAGOV, M.3
-
5
-
-
33646901020
-
Reverse engineering the gap gene network of Drosophila melanogaster. PLoS
-
PERKINS, T.J., J. JAEGER, J. REINITZ & L. GLASS. 2006. Reverse engineering the gap gene network of Drosophila melanogaster. PLoS Comp. Biol. 2: e51.
-
(2006)
Comp. Biol
, vol.2
-
-
PERKINS, T.J.1
JAEGER, J.2
REINITZ, J.3
GLASS, L.4
-
6
-
-
3142591896
-
A database for management of gene expression data in situ
-
POUSTELNIKOVA, E., A. PISAREV, M. BLAGOV, et al. 2004. A database for management of gene expression data in situ. Bioinformatics 20: 2212-2221.
-
(2004)
Bioinformatics
, vol.20
, pp. 2212-2221
-
-
POUSTELNIKOVA, E.1
PISAREV, A.2
BLAGOV, M.3
-
7
-
-
19344375742
-
Transcriptional control in the segmentation gene network of Drosophila
-
SCHROEDER, M.D., M. PEARCE, J. FAK, et al. 2004. Transcriptional control in the segmentation gene network of Drosophila. PLoS Biol. 2: e271.
-
(2004)
PLoS Biol
, vol.2
-
-
SCHROEDER, M.D.1
PEARCE, M.2
FAK, J.3
-
8
-
-
33749137281
-
Quantitative and predictive model of transcriptional control of the Drosophila melanogaster even skipped gene
-
JANSSENS, H., S. HOU, J. JAEGER, et al. 2006. Quantitative and predictive model of transcriptional control of the Drosophila melanogaster even skipped gene. Nat. Genet. 36: 1159-1165.
-
(2006)
Nat. Genet
, vol.36
, pp. 1159-1165
-
-
JANSSENS, H.1
HOU, S.2
JAEGER, J.3
-
9
-
-
0023635756
-
The molecular basis for metameric pattern in the Drosophila embryo
-
AKAM, M. 1987. The molecular basis for metameric pattern in the Drosophila embryo. Development 101: 1-22.
-
(1987)
Development
, vol.101
, pp. 1-22
-
-
AKAM, M.1
-
10
-
-
0024075160
-
The molecular genetics of embryonic pattern formation in Drosophila
-
INGHAM, P.W. 1988. The molecular genetics of embryonic pattern formation in Drosophila. Nature 335: 25-34.
-
(1988)
Nature
, vol.335
, pp. 25-34
-
-
INGHAM, P.W.1
-
11
-
-
36248937706
-
-
BEUTER, A., L. GLASS, M.C. MACKAY, et al. 2003. Nonlinear Dynamics in Physiology and Medicine. Springer-Verlag. New York.
-
BEUTER, A., L. GLASS, M.C. MACKAY, et al. 2003. Nonlinear Dynamics in Physiology and Medicine. Springer-Verlag. New York.
-
-
-
-
13
-
-
0029375851
-
Gradient calculations for dynamic recurrent neural networks: A survey
-
PEARLMUTTER, B.A. 1995. Gradient calculations for dynamic recurrent neural networks: a survey. IEEE Trans. Neural Networks 6: 1212-1228.
-
(1995)
IEEE Trans. Neural Networks
, vol.6
, pp. 1212-1228
-
-
PEARLMUTTER, B.A.1
-
14
-
-
33749553474
-
Combinatorial and topological methods in nonlinear chemical kinetics
-
GLASS. L. 1975. Combinatorial and topological methods in nonlinear chemical kinetics. J. Chem. Phys. 63: 1325-1335.
-
(1975)
J. Chem. Phys
, vol.63
, pp. 1325-1335
-
-
GLASS, L.1
-
15
-
-
0034315476
-
Analysis of continuous-time switching networks
-
EDWARDS, R. 2000. Analysis of continuous-time switching networks. Physica D 146: 165-199.
-
(2000)
Physica D
, vol.146
, pp. 165-199
-
-
EDWARDS, R.1
-
16
-
-
0013387906
-
Symbolic dynamics and computation in model gene networks
-
EDWARDS, R., H.T. SIEGELMANN, K. AZIZA & L. GLASS. 2001. Symbolic dynamics and computation in model gene networks. Chaos 11: 160-169.
-
(2001)
Chaos
, vol.11
, pp. 160-169
-
-
EDWARDS, R.1
SIEGELMANN, H.T.2
AZIZA, K.3
GLASS, L.4
-
17
-
-
0345269975
-
Genetic network analyzer: Qualitative simulation of genetic regulatory networks
-
DE JONG, H., J. GEISELMANN, C. HERNANDEZ & M. PAGE. 2003. Genetic network analyzer: qualitative simulation of genetic regulatory networks. Bioinformatics 19: 336-344.
-
(2003)
Bioinformatics
, vol.19
, pp. 336-344
-
-
DE JONG, H.1
GEISELMANN, J.2
HERNANDEZ, C.3
PAGE, M.4
-
18
-
-
1242333310
-
Qualitative simulation of genetic regulatory networks using piecewise-linear models
-
DE JONG, H., J.-L. GOUZE, C. HERNANDEZ, et al. 2004. Qualitative simulation of genetic regulatory networks using piecewise-linear models. Bull. Math. Biol. 66: 301-340.
-
(2004)
Bull. Math. Biol
, vol.66
, pp. 301-340
-
-
DE JONG, H.1
GOUZE, J.-L.2
HERNANDEZ, C.3
-
19
-
-
1242345225
-
Qualitative simulation of the initiation of sporulation in Bacillus subtilis
-
DE JONGV, H., J. GEISELMANN, G. BATT, et al. 2004. Qualitative simulation of the initiation of sporulation in Bacillus subtilis. Bull. Math. Biol. 66: 261-300.
-
(2004)
Bull. Math. Biol
, vol.66
, pp. 261-300
-
-
DE JONGV, H.1
GEISELMANN, J.2
BATT, G.3
-
20
-
-
33646377419
-
Qualitative simulation of the carbon starvation response in Escherichia coli
-
ROPERS, D., H. DEJONG, M. PAGE, et al. 2006. Qualitative simulation of the carbon starvation response in Escherichia coli. BioSystems 84: 124-152.
-
(2006)
BioSystems
, vol.84
, pp. 124-152
-
-
ROPERS, D.1
DEJONG, H.2
PAGE, M.3
-
21
-
-
4143051643
-
Inferring models of gene expression dynamics
-
PERKINS, T.J., M.T. HALLETT & L. GLASS. 2004. Inferring models of gene expression dynamics. J. Theor. Biol. 230: 289-299.
-
(2004)
J. Theor. Biol
, vol.230
, pp. 289-299
-
-
PERKINS, T.J.1
HALLETT, M.T.2
GLASS, L.3
-
22
-
-
33645998778
-
Dynamical properties of model gene networks and implications for the inverse problem
-
PERKINS, T.J., M. HALLETT & L. GLASS. 2006. Dynamical properties of model gene networks and implications for the inverse problem. BioSystems 84: 115-123.
-
(2006)
BioSystems
, vol.84
, pp. 115-123
-
-
PERKINS, T.J.1
HALLETT, M.2
GLASS, L.3
-
23
-
-
29044447781
-
Chaotic dynamics in an electronic model of a genetic network
-
GLASS, L., T.J. PERKINS, J. MASON, et al. 2005. Chaotic dynamics in an electronic model of a genetic network. J. Stat. Phys. 121: 969-994.
-
(2005)
J. Stat. Phys
, vol.121
, pp. 969-994
-
-
GLASS, L.1
PERKINS, T.J.2
MASON, J.3
-
24
-
-
33745796556
-
Reconstruction of switching thresholds in piecewise-affine models of genetic regulatory networks
-
Hybrid Systems: Computation and Control, HSCC 2006, Springer-Verlag. New York
-
DRULHE, S., G. FERRARI-TRECATE, H. DEJONG & A. VIARI. 2006. Reconstruction of switching thresholds in piecewise-affine models of genetic regulatory networks. In Hybrid Systems: Computation and Control, HSCC 2006, Lecture Notes in Computer Science 3927: 184-199. Springer-Verlag. New York.
-
(2006)
Lecture Notes in Computer Science
, vol.3927
, pp. 184-199
-
-
DRULHE, S.1
FERRARI-TRECATE, G.2
DEJONG, H.3
VIARI, A.4
-
26
-
-
0342625542
-
Parallel simulated annealing by mixing of states
-
CHU, K.W., Y. DENG & J. REINITZ. 1999. Parallel simulated annealing by mixing of states. J. Comp. Phys. 148: 646-662.
-
(1999)
J. Comp. Phys
, vol.148
, pp. 646-662
-
-
CHU, K.W.1
DENG, Y.2
REINITZ, J.3
-
27
-
-
0028897360
-
Mechanism of eve stripe formation
-
REINITZ J. & D.H. SHARP. 1995. Mechanism of eve stripe formation. Mech. Devel. 49: 133-158.
-
(1995)
Mech. Devel
, vol.49
, pp. 133-158
-
-
REINITZ, J.1
SHARP, D.H.2
-
30
-
-
0031814029
-
Rapid preparation of a panel of polyclonal antibodies to Drosophila segmentation proteins
-
KOSMAN, D., S. SMALL & J. REINITZ. 1998. Rapid preparation of a panel of polyclonal antibodies to Drosophila segmentation proteins. Devel. Genes Evol. 208: 290-294.
-
(1998)
Devel. Genes Evol
, vol.208
, pp. 290-294
-
-
KOSMAN, D.1
SMALL, S.2
REINITZ, J.3
-
31
-
-
0035115973
-
Registration of the expression patterns of Drosophila segmentation genes by two independent methods
-
MYASNIKOVA, E., A. SAMSONOVA, K. KOZLOV, et al. 2001. Registration of the expression patterns of Drosophila segmentation genes by two independent methods. Bioinformatics 17: 3-12,
-
(2001)
Bioinformatics
, vol.17
, pp. 3-12
-
-
MYASNIKOVA, E.1
SAMSONOVA, A.2
KOZLOV, K.3
-
32
-
-
22844442948
-
A high-throughput method for quantifying gene expression data from early Drosophila embryos
-
JANSSENS, H., D. KOSMAN, C.E. VANARIO-ALONSO, et al. 2005. A high-throughput method for quantifying gene expression data from early Drosophila embryos. Devel. Genes Evol. 215: 374-381.
-
(2005)
Devel. Genes Evol
, vol.215
, pp. 374-381
-
-
JANSSENS, H.1
KOSMAN, D.2
VANARIO-ALONSO, C.E.3
-
33
-
-
21344474605
-
Removal of background signal from in situ data on the expression of segmentation gene in Drosophila
-
MYASNIKOVA, E., M. SAMSONOVA, D. KOSMAN & J. REINITZ. 2005. Removal of background signal from in situ data on the expression of segmentation gene in Drosophila. Devel. Genes Evol. 215: 320-326.
-
(2005)
Devel. Genes Evol
, vol.215
, pp. 320-326
-
-
MYASNIKOVA, E.1
SAMSONOVA, M.2
KOSMAN, D.3
REINITZ, J.4
-
34
-
-
0025471633
-
Fundamental concepts of qualitative probabilistic networks
-
WELLMAN. M.P. 1990. Fundamental concepts of qualitative probabilistic networks. Art. Intel. 44: 257-303.
-
(1990)
Art. Intel
, vol.44
, pp. 257-303
-
-
WELLMAN, M.P.1
|