-
1
-
-
0035925564
-
The role of mass spectrometry in vaccine development
-
Poland, G.A., Ovsyannikova, I.G., Johnson, K.L. & Naylor, S. The role of mass spectrometry in vaccine development. Vaccine 19, 2692-2700 (2001).
-
(2001)
Vaccine
, vol.19
, pp. 2692-2700
-
-
Poland, G.A.1
Ovsyannikova, I.G.2
Johnson, K.L.3
Naylor, S.4
-
2
-
-
29244462802
-
Identification of protective and non-protective T cell epitopes in influenza
-
Crowe, S.R., Miller, S.C. & Woodland, D.L. Identification of protective and non-protective T cell epitopes in influenza. Vaccine 24, 452-456 (2006).
-
(2006)
Vaccine
, vol.24
, pp. 452-456
-
-
Crowe, S.R.1
Miller, S.C.2
Woodland, D.L.3
-
3
-
-
0030928128
-
Development of a candidate HLA A*0201 restricted peptide-based vaccine against human cytomegalovirus infection
-
Diamond, D.J., York, J., Sun, J.Y., Wright, C.L. & Forman, S.J. Development of a candidate HLA A*0201 restricted peptide-based vaccine against human cytomegalovirus infection. Blood 90, 1751-1767 (1997).
-
(1997)
Blood
, vol.90
, pp. 1751-1767
-
-
Diamond, D.J.1
York, J.2
Sun, J.Y.3
Wright, C.L.4
Forman, S.J.5
-
4
-
-
17644401678
-
Peptide-based therapeutic vaccines for allergic and autoimmune diseases
-
Larche, M. & Wraith, D.C. Peptide-based therapeutic vaccines for allergic and autoimmune diseases. Nat. Med. 11, S69-S76 (2005).
-
(2005)
Nat. Med
, vol.11
-
-
Larche, M.1
Wraith, D.C.2
-
5
-
-
0036295173
-
Lipopeptide vaccines - yesterday, today, and tomorrow
-
BenMohamed, L., Wechsler, S.L. & Nesburn, A.B. Lipopeptide vaccines - yesterday, today, and tomorrow. Lancet Infect. Dis. 2, 425-431 (2002).
-
(2002)
Lancet Infect. Dis
, vol.2
, pp. 425-431
-
-
BenMohamed, L.1
Wechsler, S.L.2
Nesburn, A.B.3
-
6
-
-
0033679243
-
Evaluation of Tcell responses to peptides and lipopeptides with MHC class I binding motifs derived from the amino acid sequence of the 19-kDa lipoprotein of Mycobacterium tuberculosis
-
Fonseca, D.P., Joosten, D., Snippe, H. & Verheul, A.F. Evaluation of Tcell responses to peptides and lipopeptides with MHC class I binding motifs derived from the amino acid sequence of the 19-kDa lipoprotein of Mycobacterium tuberculosis. Mol. Immunol. 37, 413-422 (2000).
-
(2000)
Mol. Immunol
, vol.37
, pp. 413-422
-
-
Fonseca, D.P.1
Joosten, D.2
Snippe, H.3
Verheul, A.F.4
-
7
-
-
0035816391
-
Lipopeptides induce cell-mediated anti-HIV immune responses in seronegative volunteers
-
Pialoux, G. et al. Lipopeptides induce cell-mediated anti-HIV immune responses in seronegative volunteers. AIDS 15, 1239-1249 (2001).
-
(2001)
AIDS
, vol.15
, pp. 1239-1249
-
-
Pialoux, G.1
-
8
-
-
0031204408
-
The hepatitis B virus-specific CTL responses induced in humans by lipopeptide vaccination are comparable to those elicited by acute viral infection
-
Livingston, B.D. et al. The hepatitis B virus-specific CTL responses induced in humans by lipopeptide vaccination are comparable to those elicited by acute viral infection. J. Immunol. 159, 1383-1392 (1997).
-
(1997)
J. Immunol
, vol.159
, pp. 1383-1392
-
-
Livingston, B.D.1
-
9
-
-
0028876917
-
Development of a lipopeptide-based therapeutic vaccine to treat chronic HBV infection. I. Induction of a primary cytotoxic T lymphocyte response in humans
-
Vitiello, A. et al. Development of a lipopeptide-based therapeutic vaccine to treat chronic HBV infection. I. Induction of a primary cytotoxic T lymphocyte response in humans. J. Clin. Invest. 95, 341-349 (1995).
-
(1995)
J. Clin. Invest
, vol.95
, pp. 341-349
-
-
Vitiello, A.1
-
10
-
-
0034661982
-
HLA-DR-promiscuous T cell epitopes from Plasmodium falciparum pre-erythrocytic-stage antigens restricted by multiple HLA class II alleles
-
Doolan, D.L. et al. HLA-DR-promiscuous T cell epitopes from Plasmodium falciparum pre-erythrocytic-stage antigens restricted by multiple HLA class II alleles. J. Immunol. 165, 1123-1137 (2000).
-
(2000)
J. Immunol
, vol.165
, pp. 1123-1137
-
-
Doolan, D.L.1
-
11
-
-
0028842070
-
Several HLA alleles share overlapping peptide specificities
-
Sidney, J. et al. Several HLA alleles share overlapping peptide specificities. J. Immunol. 154, 247-259 (1995).
-
(1995)
J. Immunol
, vol.154
, pp. 247-259
-
-
Sidney, J.1
-
12
-
-
34247202685
-
New tools, new approaches and new ideas for vaccine development
-
De Groot, A.S. & Moise, L. New tools, new approaches and new ideas for vaccine development. Expert Rev. Vaccines 6, 125-127 (2007).
-
(2007)
Expert Rev. Vaccines
, vol.6
, pp. 125-127
-
-
De Groot, A.S.1
Moise, L.2
-
13
-
-
0041402836
-
Epitope-based vaccines: An update on epitope identification, vaccine design and delivery
-
Sette, A. & Fikes, J. Epitope-based vaccines: an update on epitope identification, vaccine design and delivery. Curr. Opin. Immunol. 15, 461-470 (2003).
-
(2003)
Curr. Opin. Immunol
, vol.15
, pp. 461-470
-
-
Sette, A.1
Fikes, J.2
-
14
-
-
0032718484
-
Identification of naturally processed and HLA-presented Epstein-Barr virus peptides recognized by CD4(+) or CD8(+) T lymphocytes from human blood
-
Herr, W. et al. Identification of naturally processed and HLA-presented Epstein-Barr virus peptides recognized by CD4(+) or CD8(+) T lymphocytes from human blood. Proc. Natl. Acad. Sci. USA 96, 12033-12038 (1999).
-
(1999)
Proc. Natl. Acad. Sci. USA
, vol.96
, pp. 12033-12038
-
-
Herr, W.1
-
15
-
-
20944433397
-
Mass tag-assisted identification of naturally processed HLA class II-presented meningococcal peptides recognized by CD4+ lymphocytes
-
Meiring, H.D. et al. Mass tag-assisted identification of naturally processed HLA class II-presented meningococcal peptides recognized by CD4+ lymphocytes. J. Immunol. 174, 5636-5643 (2005).
-
(2005)
J. Immunol
, vol.174
, pp. 5636-5643
-
-
Meiring, H.D.1
-
16
-
-
0030045482
-
+ cytotoxic T lymphocytes
-
+ cytotoxic T lymphocytes. J. Clin. Invest. 97, 577-584 (1996).
-
(1996)
J. Clin. Invest
, vol.97
, pp. 577-584
-
-
Tsai, S.-L.1
-
17
-
-
0028067568
-
Naturally processed viral peptides recognized by cytotoxic T lymphocytes on cells chronically infected by human immunodeficiency virus type 1
-
Tsomides, T.J. et al. Naturally processed viral peptides recognized by cytotoxic T lymphocytes on cells chronically infected by human immunodeficiency virus type 1. J. Exp. Med. 180, 1283-1293 (1994).
-
(1994)
J. Exp. Med
, vol.180
, pp. 1283-1293
-
-
Tsomides, T.J.1
-
18
-
-
0033997965
-
A single naturally processed measles virus peptide fully dominates the HLA-A*0201-associated peptide display and is mutated at its anchor position in persistent viral strains
-
van Els, C.A. et al. A single naturally processed measles virus peptide fully dominates the HLA-A*0201-associated peptide display and is mutated at its anchor position in persistent viral strains. Eur. J. Immunol. 30, 1172-1181 (2000).
-
(2000)
Eur. J. Immunol
, vol.30
, pp. 1172-1181
-
-
van Els, C.A.1
-
19
-
-
26944466779
-
Accurate mass precursor ion data and tandem mass spectrometry identify a class I human leukocyte antigen A*0201-presented peptide originating from vaccinia virus
-
Johnson, K.L., Ovsyannikova, I.G., Madden, B.J., Poland, G.A. & Muddiman, D.C. Accurate mass precursor ion data and tandem mass spectrometry identify a class I human leukocyte antigen A*0201-presented peptide originating from vaccinia virus. J. Am. Soc. Mass Spectrom. 16, 1812-1817 (2005).
-
(2005)
J. Am. Soc. Mass Spectrom
, vol.16
, pp. 1812-1817
-
-
Johnson, K.L.1
Ovsyannikova, I.G.2
Madden, B.J.3
Poland, G.A.4
Muddiman, D.C.5
-
20
-
-
4143097915
-
Immunodominance in TCD8+ responses to viruses: Cell biology, cellular immunology, and mathematical models
-
Yewdell, J.W. & Del Val, M. Immunodominance in TCD8+ responses to viruses: cell biology, cellular immunology, and mathematical models. Immunity 21, 149-153 (2004).
-
(2004)
Immunity
, vol.21
, pp. 149-153
-
-
Yewdell, J.W.1
Del Val, M.2
-
21
-
-
0036259791
-
+-T-cell Mycobacterium tuberculosis epitopes within the Rv0341 gene product
-
+-T-cell Mycobacterium tuberculosis epitopes within the Rv0341 gene product. Infect. Immun. 70, 2926-2932 (2002).
-
(2002)
Infect. Immun
, vol.70
, pp. 2926-2932
-
-
Flyer, D.C.1
-
22
-
-
0346995217
-
Identification and characterization of novel, naturally processed measles virus class II HLA-DRB1 peptides
-
Ovsyannikova, I.G., Johnson, K.L., Muddiman, D.C., Vierkant, R.A. & Poland, G.A. Identification and characterization of novel, naturally processed measles virus class II HLA-DRB1 peptides. J. Virol. 78, 42-51 (2004).
-
(2004)
J. Virol
, vol.78
, pp. 42-51
-
-
Ovsyannikova, I.G.1
Johnson, K.L.2
Muddiman, D.C.3
Vierkant, R.A.4
Poland, G.A.5
-
23
-
-
33746132748
-
A consensus epitope prediction approach identifies the breadth of murine T(CD8+)-cell responses to vaccinia virus
-
Moutaftsi, M. et al. A consensus epitope prediction approach identifies the breadth of murine T(CD8+)-cell responses to vaccinia virus. Nat. Biotechnol. 24, 817-819 (2006).
-
(2006)
Nat. Biotechnol
, vol.24
, pp. 817-819
-
-
Moutaftsi, M.1
-
24
-
-
0024410347
-
Identical peptides recognized by MHC class I- and II-restricted T cells
-
Perkins, D.L., Lai, M.Z., Smith, J.A. & Gefter, M.L. Identical peptides recognized by MHC class I- and II-restricted T cells. J. Exp. Med. 170, 279-289 (1989).
-
(1989)
J. Exp. Med
, vol.170
, pp. 279-289
-
-
Perkins, D.L.1
Lai, M.Z.2
Smith, J.A.3
Gefter, M.L.4
-
25
-
-
0025370730
-
Peptides recognized by class I restricted T cells also bind to MHC class II molecules
-
Hickling, J.K., Fenton, C.M., Howland, K., Marsh, S.G. & Rothbard, J.B. Peptides recognized by class I restricted T cells also bind to MHC class II molecules. Int. Immunol. 2, 435-441 (1990).
-
(1990)
Int. Immunol
, vol.2
, pp. 435-441
-
-
Hickling, J.K.1
Fenton, C.M.2
Howland, K.3
Marsh, S.G.4
Rothbard, J.B.5
-
26
-
-
0025721117
-
Random association between the peptide repertoire of A2.1 class I and several different DR class II molecules
-
Sette, A. et al. Random association between the peptide repertoire of A2.1 class I and several different DR class II molecules. J. Immunol. 147, 3893-3900 (1991).
-
(1991)
J. Immunol
, vol.147
, pp. 3893-3900
-
-
Sette, A.1
-
27
-
-
34249872700
-
Hemagglutinin protein is a primary target of the measles virus-specific HLA-A2-restricted CD8+ T cell response during measles and after vaccination
-
Ota, M.O. et al. Hemagglutinin protein is a primary target of the measles virus-specific HLA-A2-restricted CD8+ T cell response during measles and after vaccination. J. Infect. Dis. 195, 1799-1807 (2007).
-
(2007)
J. Infect. Dis
, vol.195
, pp. 1799-1807
-
-
Ota, M.O.1
-
28
-
-
29144501530
-
Identification of class II HLA-DRB1*03-bound measles virus peptides by 2D-liquid chromatography tandem mass spectrometry
-
Johnson, K.L., Ovsyannikova, I.G., Poland, G. & Muddiman, D.C. Identification of class II HLA-DRB1*03-bound measles virus peptides by 2D-liquid chromatography tandem mass spectrometry. J. Proteome Res. 4, 2243-2249 (2005).
-
(2005)
J. Proteome Res
, vol.4
, pp. 2243-2249
-
-
Johnson, K.L.1
Ovsyannikova, I.G.2
Poland, G.3
Muddiman, D.C.4
-
29
-
-
0025855156
-
Allele-specific motifs revealed by sequencing of self-peptides eluted from MHC molecules
-
Falk, K., Rötzschke, O., Stevanovic, S., Jung, G. & Rammensee, H.-G. Allele-specific motifs revealed by sequencing of self-peptides eluted from MHC molecules. Nature 351, 290-296 (1991).
-
(1991)
Nature
, vol.351
, pp. 290-296
-
-
Falk, K.1
Rötzschke, O.2
Stevanovic, S.3
Jung, G.4
Rammensee, H.-G.5
-
30
-
-
0026507564
-
Characterization of peptides bound to the class I MHC molecule HLA-A2.1 by mass spectrometry
-
Hunt, D.F. et al. Characterization of peptides bound to the class I MHC molecule HLA-A2.1 by mass spectrometry. Science 255, 1261-1263 (1992).
-
(1992)
Science
, vol.255
, pp. 1261-1263
-
-
Hunt, D.F.1
-
31
-
-
0026664454
-
d
-
d. Science 256, 1817-1820 (1992).
-
(1992)
Science
, vol.256
, pp. 1817-1820
-
-
Hunt, D.F.1
-
32
-
-
2642578228
-
Immunoproteomics: Mass spectrometry-based methods to study the targets of the immune response
-
Purcell, A.W. & Gorman, J.J. Immunoproteomics: mass spectrometry-based methods to study the targets of the immune response. Mol. Cell. Proteomics 3, 193-208 (2004).
-
(2004)
Mol. Cell. Proteomics
, vol.3
, pp. 193-208
-
-
Purcell, A.W.1
Gorman, J.J.2
-
33
-
-
33750616738
-
The contributions of mass spectrometry to understanding of immune recognition by T lymphocytes
-
Engelhard, V.H. The contributions of mass spectrometry to understanding of immune recognition by T lymphocytes. Int. J. Mass Spectrom. 259, 32-39 (2007).
-
(2007)
Int. J. Mass Spectrom
, vol.259
, pp. 32-39
-
-
Engelhard, V.H.1
-
34
-
-
33644898528
-
Automated protein identification by tandem mass spectrometry: Issues and strategies
-
Hernandez, P., Muller, M. & Appel, R.D. Automated protein identification by tandem mass spectrometry: issues and strategies. Mass Spectrom. Rev. 25, 235-254 (2006).
-
(2006)
Mass Spectrom. Rev
, vol.25
, pp. 235-254
-
-
Hernandez, P.1
Muller, M.2
Appel, R.D.3
-
35
-
-
0035319968
-
The application of proteomics in defining the T cell antigens of Mycobacterium tuberculosis
-
Covert, B.A., Spencer, J.S., Orme, I.M. & Belisle, J.T. The application of proteomics in defining the T cell antigens of Mycobacterium tuberculosis. Proteomics 1, 574-586 (2001).
-
(2001)
Proteomics
, vol.1
, pp. 574-586
-
-
Covert, B.A.1
Spencer, J.S.2
Orme, I.M.3
Belisle, J.T.4
-
36
-
-
32344453260
-
Characterization and identification of vaccine candidate proteins through analysis of the group A Streptococcus surface proteome
-
Rodriguez-Ortega, M.J. et al. Characterization and identification of vaccine candidate proteins through analysis of the group A Streptococcus surface proteome. Nat. Biotechnol. 24, 191-197 (2006).
-
(2006)
Nat. Biotechnol
, vol.24
, pp. 191-197
-
-
Rodriguez-Ortega, M.J.1
-
37
-
-
33846534321
-
Distorted relation between mRNA copy number and corresponding major histocompatibility complex ligand density on the cell surface
-
Weinzierl, A.O. et al. Distorted relation between mRNA copy number and corresponding major histocompatibility complex ligand density on the cell surface. Mol. Cell. Proteomics 6, 102-113 (2007).
-
(2007)
Mol. Cell. Proteomics
, vol.6
, pp. 102-113
-
-
Weinzierl, A.O.1
-
38
-
-
33646945873
-
Stable isotope tagging of epitopes: A highly selective strategy for the identification of major histocompatibility complex class I-associated peptides induced upon viral infection
-
Meiring, H.D. et al. Stable isotope tagging of epitopes: a highly selective strategy for the identification of major histocompatibility complex class I-associated peptides induced upon viral infection. Mol. Cell. Proteomics 5, 902-913 (2006).
-
(2006)
Mol. Cell. Proteomics
, vol.5
, pp. 902-913
-
-
Meiring, H.D.1
-
39
-
-
0034133274
-
Electron capture dissociation for structural characterization of multiply charged protein cations
-
Zubarev, R.A. et al. Electron capture dissociation for structural characterization of multiply charged protein cations. Anal. Chem. 72, 563-573 (2000).
-
(2000)
Anal. Chem
, vol.72
, pp. 563-573
-
-
Zubarev, R.A.1
-
40
-
-
0032578463
-
Counting individual sulfur atoms in a protein by ultrahigh-resolution Fourier transform ion cyclotron resonance mass spectrometry: Experimental resolution of isotopic fine structure in proteins
-
Shi, S.D., Hendrickson, C.L. & Marshall, A.G. Counting individual sulfur atoms in a protein by ultrahigh-resolution Fourier transform ion cyclotron resonance mass spectrometry: experimental resolution of isotopic fine structure in proteins. Proc. Natl. Acad. Sci. USA 95, 11532-11537 (1998).
-
(1998)
Proc. Natl. Acad. Sci. USA
, vol.95
, pp. 11532-11537
-
-
Shi, S.D.1
Hendrickson, C.L.2
Marshall, A.G.3
-
41
-
-
0033151997
-
Probing proteomes using capillary isoelectric focusing-electrospray ionization Fourier transform ion cyclotron resonance mass spectrometry
-
Jensen, P.K. et al. Probing proteomes using capillary isoelectric focusing-electrospray ionization Fourier transform ion cyclotron resonance mass spectrometry. Anal. Chem. 71, 2076-2084 (1999).
-
(1999)
Anal. Chem
, vol.71
, pp. 2076-2084
-
-
Jensen, P.K.1
-
42
-
-
0142195725
-
Use of double-depleted 13C and 15N culture media for analysis of whole cell bacteria by MALDI time-of-flight and Fourier transform mass spectrometry
-
Stump, M.J., Jones, J.J., Fleming, R.C., Lay, J.O. Jr. & Wilkins, C.L. Use of double-depleted 13C and 15N culture media for analysis of whole cell bacteria by MALDI time-of-flight and Fourier transform mass spectrometry. J. Am. Soc. Mass Spectrom. 14, 1306-1314 (2003).
-
(2003)
J. Am. Soc. Mass Spectrom
, vol.14
, pp. 1306-1314
-
-
Stump, M.J.1
Jones, J.J.2
Fleming, R.C.3
Lay Jr., J.O.4
Wilkins, C.L.5
-
43
-
-
1542723076
-
Improved mass analysis of oligoribonucleotides by 13C, 15N double depletion and electrospray ionization FT-ICR mass spectrometry
-
Xiong, Y., Schroeder, K., Greenbaum, N.L., Hendrickson, C.L. & Marshall, A.G. Improved mass analysis of oligoribonucleotides by 13C, 15N double depletion and electrospray ionization FT-ICR mass spectrometry. Anal. Chem. 76, 1804-1809 (2004).
-
(2004)
Anal. Chem
, vol.76
, pp. 1804-1809
-
-
Xiong, Y.1
Schroeder, K.2
Greenbaum, N.L.3
Hendrickson, C.L.4
Marshall, A.G.5
-
44
-
-
1842529550
-
Differential quantitative analysis of MHC ligands by mass spectrometry using stable isotope labeling
-
Lemmel, C. et al. Differential quantitative analysis of MHC ligands by mass spectrometry using stable isotope labeling. Nat. Biotechnol. 22, 450-454 (2004).
-
(2004)
Nat. Biotechnol
, vol.22
, pp. 450-454
-
-
Lemmel, C.1
-
45
-
-
13744260910
-
Use of selected reaction monitoring mass spectrometry for the detection of specific MHC class I peptide antigens on A3 supertype family members
-
Hogan, K.T. et al. Use of selected reaction monitoring mass spectrometry for the detection of specific MHC class I peptide antigens on A3 supertype family members. Cancer Immunol. Immunother. 54, 359-371 (2005).
-
(2005)
Cancer Immunol. Immunother
, vol.54
, pp. 359-371
-
-
Hogan, K.T.1
-
46
-
-
0028106321
-
Peptide binding to the most frequent HLA-A class I alleles measured by quantitative molecular binding assays
-
Sette, A. et al. Peptide binding to the most frequent HLA-A class I alleles measured by quantitative molecular binding assays. Mol. Immunol. 31, 813-822 (1994).
-
(1994)
Mol. Immunol
, vol.31
, pp. 813-822
-
-
Sette, A.1
-
47
-
-
0027973079
-
The relationship between class I binding affinity and immunogenicity of potential cytotoxic T cell epitopes
-
Sette, A. et al. The relationship between class I binding affinity and immunogenicity of potential cytotoxic T cell epitopes. J. Immunol. 153, 5586-5592 (1994).
-
(1994)
J. Immunol
, vol.153
, pp. 5586-5592
-
-
Sette, A.1
-
48
-
-
0027525373
-
Isolation and characterization of naturally processed peptides bound by class II molecules and peptides presented by normal and mutant antigen-presenting cells
-
Sette, A. et al. Isolation and characterization of naturally processed peptides bound by class II molecules and peptides presented by normal and mutant antigen-presenting cells. Chem. Immunol. 57, 152-165 (1993).
-
(1993)
Chem. Immunol
, vol.57
, pp. 152-165
-
-
Sette, A.1
-
49
-
-
0034660192
-
Immunodominance among EBV-derived epitopes restricted by HLA-B27 does not correlate with epitope abundance in EBV-transformed B-lymphoblastoid cell lines
-
Crotzer, V.L. et al. Immunodominance among EBV-derived epitopes restricted by HLA-B27 does not correlate with epitope abundance in EBV-transformed B-lymphoblastoid cell lines. J. Immunol. 164, 6120-6129 (2000).
-
(2000)
J. Immunol
, vol.164
, pp. 6120-6129
-
-
Crotzer, V.L.1
-
50
-
-
0025741031
-
Peptide binding to class I MHC on living cells and quantitation of complexes required for CTL lysis
-
Christinck, E.R., Luscher, M.A., Barber, B.H. & Williams, D.B. Peptide binding to class I MHC on living cells and quantitation of complexes required for CTL lysis. Nature 352, 67-70 (1991).
-
(1991)
Nature
, vol.352
, pp. 67-70
-
-
Christinck, E.R.1
Luscher, M.A.2
Barber, B.H.3
Williams, D.B.4
-
51
-
-
0025182003
-
The minimal number of class II MHC-antigen complexes needed for T cell activation
-
Demotz, S., Grey, H.M. & Sette, A. The minimal number of class II MHC-antigen complexes needed for T cell activation. Science 249, 1028-1030 (1990).
-
(1990)
Science
, vol.249
, pp. 1028-1030
-
-
Demotz, S.1
Grey, H.M.2
Sette, A.3
-
52
-
-
0025286210
-
Quantitation of antigen-presenting cell MHC class II/peptide complexes necessary for T-cell stimulation
-
Harding, C.V. & Unanue, E.R. Quantitation of antigen-presenting cell MHC class II/peptide complexes necessary for T-cell stimulation. Nature 346, 574-576 (1990).
-
(1990)
Nature
, vol.346
, pp. 574-576
-
-
Harding, C.V.1
Unanue, E.R.2
-
53
-
-
33748320788
-
Optimized peptide separation and identification for mass spectrometry based proteomics via free-flow electrophoresis
-
Malmstrom, J. et al. Optimized peptide separation and identification for mass spectrometry based proteomics via free-flow electrophoresis. J. Proteome Res. 5, 2241-2249 (2006).
-
(2006)
J. Proteome Res
, vol.5
, pp. 2241-2249
-
-
Malmstrom, J.1
-
54
-
-
33745857712
-
In-gel isoelectric focusing of peptides as a tool for improved protein identification
-
Krijgsveld, J., Gauci, S., Dormeyer, W. & Heck, A.J. In-gel isoelectric focusing of peptides as a tool for improved protein identification. J. Proteome Res. 5, 1721-1730 (2006).
-
(2006)
J. Proteome Res
, vol.5
, pp. 1721-1730
-
-
Krijgsveld, J.1
Gauci, S.2
Dormeyer, W.3
Heck, A.J.4
-
55
-
-
13244271374
-
A comparison of immobilized pH gradient isoelectric focusing and strong-cation-exchange chromatography as a first dimension in shotgun proteomics
-
Essader, A.S., Cargile, B.J., Bundy, J.L. & Stephenson, J.L. Jr. A comparison of immobilized pH gradient isoelectric focusing and strong-cation-exchange chromatography as a first dimension in shotgun proteomics. Proteomics 5, 24-34 (2005).
-
(2005)
Proteomics
, vol.5
, pp. 24-34
-
-
Essader, A.S.1
Cargile, B.J.2
Bundy, J.L.3
Stephenson Jr., J.L.4
-
56
-
-
0033060799
-
A new liquid chromatography/tandem mass spectrometric approach for the identification of class I major histocompatibility complex-associated peptides that eliminates the need for bioassays
-
Brockman, A.H., Orlando, R. & Tarleton, R.L. A new liquid chromatography/tandem mass spectrometric approach for the identification of class I major histocompatibility complex-associated peptides that eliminates the need for bioassays. Rapid Commun. Mass Spectrom. 13, 1024-1030 (1999).
-
(1999)
Rapid Commun. Mass Spectrom
, vol.13
, pp. 1024-1030
-
-
Brockman, A.H.1
Orlando, R.2
Tarleton, R.L.3
-
57
-
-
33749513200
-
Identification of class I MHC-associated phosphopeptides as targets for cancer immunotherapy
-
Zarling, A.L. et al. Identification of class I MHC-associated phosphopeptides as targets for cancer immunotherapy. Proc. Natl. Acad. Sci. USA 103, 14889-14894 (2006).
-
(2006)
Proc. Natl. Acad. Sci. USA
, vol.103
, pp. 14889-14894
-
-
Zarling, A.L.1
-
58
-
-
0030615171
-
The HLA-A*0201-restricted H-Y antigen contains a posttranslationally modified cysteine that significantly affects T cell recognition
-
Meadows, L. et al. The HLA-A*0201-restricted H-Y antigen contains a posttranslationally modified cysteine that significantly affects T cell recognition. Immunity 6, 273-281 (1997).
-
(1997)
Immunity
, vol.6
, pp. 273-281
-
-
Meadows, L.1
-
59
-
-
0028052724
-
Scheme for ranking potential HLA-A2 binding peptides based on independent binding of individual peptide side-chains
-
Parker, K.C., Bednarek, M.A. & Coligan, J.E. Scheme for ranking potential HLA-A2 binding peptides based on independent binding of individual peptide side-chains. J. Immunol. 152, 163-175 (1994).
-
(1994)
J. Immunol
, vol.152
, pp. 163-175
-
-
Parker, K.C.1
Bednarek, M.A.2
Coligan, J.E.3
-
60
-
-
0033388725
-
SYFPEITHI: Database for MHC ligands and peptide motifs
-
Rammensee, H.-G., Bachmann, J., Emmerich, N.P.N., Bachor, O.A. & Stevanovic, S. SYFPEITHI: database for MHC ligands and peptide motifs. Immunogenetics 50, 213-219 (1999).
-
(1999)
Immunogenetics
, vol.50
, pp. 213-219
-
-
Rammensee, H.-G.1
Bachmann, J.2
Emmerich, N.P.N.3
Bachor, O.A.4
Stevanovic, S.5
-
61
-
-
2442499729
-
Improved prediction of MHC class I and class II epitopes using a novel Gibbs sampling approach
-
Nielsen, M. et al. Improved prediction of MHC class I and class II epitopes using a novel Gibbs sampling approach. Bioinformatics 20, 1388-1397 (2004).
-
(2004)
Bioinformatics
, vol.20
, pp. 1388-1397
-
-
Nielsen, M.1
-
62
-
-
34249663299
-
Integrating epitope data into the emerging web of biomedical knowledge resources
-
Peters, B. & Sette, A. Integrating epitope data into the emerging web of biomedical knowledge resources. Nat. Rev. Immunol. 7, 485-490 (2007).
-
(2007)
Nat. Rev. Immunol
, vol.7
, pp. 485-490
-
-
Peters, B.1
Sette, A.2
-
63
-
-
19944431356
-
Identification of poxvirus CD8+ T cell determinants to enable rational design and characterization of smallpox vaccines
-
Tscharke, D.C. et al. Identification of poxvirus CD8+ T cell determinants to enable rational design and characterization of smallpox vaccines. J. Exp. Med. 201, 95-104 (2005).
-
(2005)
J. Exp. Med
, vol.201
, pp. 95-104
-
-
Tscharke, D.C.1
-
64
-
-
25444504038
-
HLA class I-restricted responses to vaccinia recognize a broad array of proteins mainly involved in virulence and viral gene regulation
-
Oseroff, C. et al. HLA class I-restricted responses to vaccinia recognize a broad array of proteins mainly involved in virulence and viral gene regulation. Proc. Natl. Acad. Sci. USA 102, 13980-13985 (2005).
-
(2005)
Proc. Natl. Acad. Sci. USA
, vol.102
, pp. 13980-13985
-
-
Oseroff, C.1
-
65
-
-
0037422549
-
Identification of vaccinia virus epitope-specific HLAA* 0201-restricted T cells and comparative analysis of smallpox vaccines
-
Drexler, I. et al. Identification of vaccinia virus epitope-specific HLAA* 0201-restricted T cells and comparative analysis of smallpox vaccines. Proc. Natl. Acad. Sci. USA 100, 217-222 (2003).
-
(2003)
Proc. Natl. Acad. Sci. USA
, vol.100
, pp. 217-222
-
-
Drexler, I.1
-
66
-
-
33745595837
-
Identification of vaccinia CD8(+) T-cell epitopes conserved among vaccinia and variola viruses restricted by common MHC class I molecules, HLA-A2 or HLA-B7
-
Terajima, M. et al. Identification of vaccinia CD8(+) T-cell epitopes conserved among vaccinia and variola viruses restricted by common MHC class I molecules, HLA-A2 or HLA-B7. Hum. Immunol. 67, 512-520 (2006).
-
(2006)
Hum. Immunol
, vol.67
, pp. 512-520
-
-
Terajima, M.1
-
67
-
-
2942652411
-
Protection against lethal vaccinia virus challenge in HLA-A2 transgenic mice by immunization with a single CD8+ T-cell peptide epitope of vaccinia and variola viruses
-
Snyder, J.T., Belyakov, I.M., Dzutsev, A., Lemonnier, F. & Berzofsky, J.A. Protection against lethal vaccinia virus challenge in HLA-A2 transgenic mice by immunization with a single CD8+ T-cell peptide epitope of vaccinia and variola viruses. J. Virol. 78, 7052-7060 (2004).
-
(2004)
J. Virol
, vol.78
, pp. 7052-7060
-
-
Snyder, J.T.1
Belyakov, I.M.2
Dzutsev, A.3
Lemonnier, F.4
Berzofsky, J.A.5
-
68
-
-
0025750131
-
Vaccinia virus encodes an active thymidylate kinase that complements a cdc8 mutant of Saccharomyces cerevisiae
-
Hughes, S.J., Johnston, L.H., de Carlos, A. & Smith, G.L. Vaccinia virus encodes an active thymidylate kinase that complements a cdc8 mutant of Saccharomyces cerevisiae. J. Biol. Chem. 266, 20103-20109 (1991).
-
(1991)
J. Biol. Chem
, vol.266
, pp. 20103-20109
-
-
Hughes, S.J.1
Johnston, L.H.2
de Carlos, A.3
Smith, G.L.4
-
69
-
-
27744451006
-
Disruption of MHC class II-restricted antigen presentation by vaccinia virus
-
Li, P. et al. Disruption of MHC class II-restricted antigen presentation by vaccinia virus. J. Immunol. 175, 6481-6488 (2005).
-
(2005)
J. Immunol
, vol.175
, pp. 6481-6488
-
-
Li, P.1
-
70
-
-
0027513758
-
Human HLA class I- and HLA class IIrestricted cloned cytotoxic T lymphocytes identify a cluster of epitopes on the measles virus fusion protein
-
van Binnendijk, R.S. et al. Human HLA class I- and HLA class IIrestricted cloned cytotoxic T lymphocytes identify a cluster of epitopes on the measles virus fusion protein. J. Virol. 67, 2276-2284 (1993).
-
(1993)
J. Virol
, vol.67
, pp. 2276-2284
-
-
van Binnendijk, R.S.1
-
71
-
-
0028806344
-
Demonstration of virus-specific CD8+ memory T cells in measles-seropositive individuals by in vitro peptide stimulation
-
Nanan, R., Carstens, C. & Kreth, H.W. Demonstration of virus-specific CD8+ memory T cells in measles-seropositive individuals by in vitro peptide stimulation. Clin. Exp. Immunol. 102, 40-45 (1995).
-
(1995)
Clin. Exp. Immunol
, vol.102
, pp. 40-45
-
-
Nanan, R.1
Carstens, C.2
Kreth, H.W.3
-
72
-
-
0033997965
-
A single naturally processed measles virus peptide fully dominates the HLA-A*0201-associated peptide display and is mutated at its anchor position in persistent viral strains
-
van Els, C.A. et al. A single naturally processed measles virus peptide fully dominates the HLA-A*0201-associated peptide display and is mutated at its anchor position in persistent viral strains. Eur. J. Immunol. 30, 1172-1181 (2000).
-
(2000)
Eur. J. Immunol
, vol.30
, pp. 1172-1181
-
-
van Els, C.A.1
-
73
-
-
0034852296
-
A measles virus glycoprotein-derived human CTL epitope is abundantly presented via the proteasomaldependent MHC class I processing pathway
-
Herberts, C.A. et al. A measles virus glycoprotein-derived human CTL epitope is abundantly presented via the proteasomaldependent MHC class I processing pathway. J. Gen. Virol. 82, 2131-2142 (2001).
-
(2001)
J. Gen. Virol
, vol.82
, pp. 2131-2142
-
-
Herberts, C.A.1
-
74
-
-
0037210430
-
Dynamics of measles virus protein expression are reflected in the MHC class I epitope display
-
Herberts, C.A. et al. Dynamics of measles virus protein expression are reflected in the MHC class I epitope display. Mol. Immunol. 39, 567-575 (2003).
-
(2003)
Mol. Immunol
, vol.39
, pp. 567-575
-
-
Herberts, C.A.1
-
75
-
-
0024235598
-
Recognition of intracellular measles virus antigens by HLA class II restricted measles virus-specific cytotoxic T lymphocytes
-
Jacobson, S. et al. Recognition of intracellular measles virus antigens by HLA class II restricted measles virus-specific cytotoxic T lymphocytes. Ann. NY Acad. Sci. 540, 352-353 (1988).
-
(1988)
Ann. NY Acad. Sci
, vol.540
, pp. 352-353
-
-
Jacobson, S.1
-
76
-
-
0028225866
-
Efficient MHC class II-restricted presentation of measles virus to T cells relies on its targeting to its cellular receptor human CD46 and involves an endosomal pathway
-
Gerlier, D. et al. Efficient MHC class II-restricted presentation of measles virus to T cells relies on its targeting to its cellular receptor human CD46 and involves an endosomal pathway. Cell Biol. Int. 18, 315-320 (1994).
-
(1994)
Cell Biol. Int
, vol.18
, pp. 315-320
-
-
Gerlier, D.1
-
77
-
-
0026762981
-
Measles virus transmembrane fusion protein synthesized de novo or presented in immunostimulating complexes is endogenously processed for HLA class I- and class IIrestricted cytotoxic T cell recognition
-
van Binnendijk, R.S. et al. Measles virus transmembrane fusion protein synthesized de novo or presented in immunostimulating complexes is endogenously processed for HLA class I- and class IIrestricted cytotoxic T cell recognition. J. Exp. Med. 176, 119-128 (1992).
-
(1992)
J. Exp. Med
, vol.176
, pp. 119-128
-
-
van Binnendijk, R.S.1
-
78
-
-
0027533620
-
Effect of measles virus infection on MHC class II expression and antigen presentation in human monocytes
-
Leopardi, R., Ilonen, J., Mattila, L. & Salmi, A.A. Effect of measles virus infection on MHC class II expression and antigen presentation in human monocytes. Cell. Immunol. 147, 388-396 (1993).
-
(1993)
Cell. Immunol
, vol.147
, pp. 388-396
-
-
Leopardi, R.1
Ilonen, J.2
Mattila, L.3
Salmi, A.A.4
-
79
-
-
0029926370
-
Activation of T cells by the ragged tail of MHC class II-presented peptides of the measles virus fusion protein
-
Muller, C.P. et al. Activation of T cells by the ragged tail of MHC class II-presented peptides of the measles virus fusion protein. Int. Immunol. 8, 445-456 (1996).
-
(1996)
Int. Immunol
, vol.8
, pp. 445-456
-
-
Muller, C.P.1
-
80
-
-
18744430792
-
Processing of DR1-restricted determinants from the fusion protein of measles virus following two distinct pathways
-
Demotz, S. & Péléraux, A. Processing of DR1-restricted determinants from the fusion protein of measles virus following two distinct pathways. Mol. Immunol. 33, 387-397 (1996).
-
(1996)
Mol. Immunol
, vol.33
, pp. 387-397
-
-
Demotz, S.1
Péléraux, A.2
-
81
-
-
0035851330
-
Identification of an association between HLA class II alleles and low antibody levels after measles immunization
-
Poland, G.A. et al. Identification of an association between HLA class II alleles and low antibody levels after measles immunization. Vaccine 20, 430-438 (2001).
-
(2001)
Vaccine
, vol.20
, pp. 430-438
-
-
Poland, G.A.1
-
82
-
-
2342648917
-
Associations between human leukocyte antigen (HLA) alleles and very high levels of measles antibody following vaccination
-
Ovsyannikova, I.G. et al. Associations between human leukocyte antigen (HLA) alleles and very high levels of measles antibody following vaccination. Vaccine 22, 1914-1920 (2004).
-
(2004)
Vaccine
, vol.22
, pp. 1914-1920
-
-
Ovsyannikova, I.G.1
-
83
-
-
0041561072
-
Naturally processed measles virus peptide eluted from class II HLA-DRB1*03 recognized by T lymphocytes from human blood
-
Ovsyannikova, I.G., Johnson, K.L., Naylor, S., Muddiman, D.C. & Poland, G.A. Naturally processed measles virus peptide eluted from class II HLA-DRB1*03 recognized by T lymphocytes from human blood. Virology 312, 495-506 (2003).
-
(2003)
Virology
, vol.312
, pp. 495-506
-
-
Ovsyannikova, I.G.1
Johnson, K.L.2
Naylor, S.3
Muddiman, D.C.4
Poland, G.A.5
-
84
-
-
1642406138
-
Influence of HLA-DRB1 alleles on lymphoproliferative responses to a naturally processed and presented measles virus phosphoprotein in measles immunized individuals
-
Ovsyannikova, I.G., Poland, G.A., Easler, N.J. & Vierkant, R.A. Influence of HLA-DRB1 alleles on lymphoproliferative responses to a naturally processed and presented measles virus phosphoprotein in measles immunized individuals. Hum. Immunol. 65, 209-217 (2004).
-
(2004)
Hum. Immunol
, vol.65
, pp. 209-217
-
-
Ovsyannikova, I.G.1
Poland, G.A.2
Easler, N.J.3
Vierkant, R.A.4
-
85
-
-
33744532752
-
Importance of HLADQ and HLA-DP polymorphisms in cytokine response to naturally processed HLA-DR-derived measles virus peptides
-
Ovsyannikova, I.G., Vierkant, R.A. & Poland, G.A. Importance of HLADQ and HLA-DP polymorphisms in cytokine response to naturally processed HLA-DR-derived measles virus peptides. Vaccine 24, 5381-5389 (2006).
-
(2006)
Vaccine
, vol.24
, pp. 5381-5389
-
-
Ovsyannikova, I.G.1
Vierkant, R.A.2
Poland, G.A.3
-
86
-
-
0027865435
-
Use of synthetic peptides in primates to induce high-titered neutralizing antibodies and MHC class I-restricted cytotoxic T cells against acquired immunodeficiency syndrome retroviruses: An HLA-based vaccine strategy
-
Haynes, B.F. et al. Use of synthetic peptides in primates to induce high-titered neutralizing antibodies and MHC class I-restricted cytotoxic T cells against acquired immunodeficiency syndrome retroviruses: an HLA-based vaccine strategy. Trans. Assoc. Am. Physicians 106, 33-41 (1993).
-
(1993)
Trans. Assoc. Am. Physicians
, vol.106
, pp. 33-41
-
-
Haynes, B.F.1
-
87
-
-
0031917272
-
Promiscuous T-cell recognition of a rubella capsid protein epitope restricted by DRB1*0403 and DRB1*0901 molecules sharing an HLA DR supertype
-
Ou, D., Mitchell, L.A., Décarie, D., Tingle, A.J. & Nepom, G.T. Promiscuous T-cell recognition of a rubella capsid protein epitope restricted by DRB1*0403 and DRB1*0901 molecules sharing an HLA DR supertype. Hum. Immunol. 59, 149-157 (1998).
-
(1998)
Hum. Immunol
, vol.59
, pp. 149-157
-
-
Ou, D.1
Mitchell, L.A.2
Décarie, D.3
Tingle, A.J.4
Nepom, G.T.5
-
88
-
-
0033787408
-
Synthetic malaria peptide vaccine elicits high levels of antibodies in vaccinees of defined HLA genotypes
-
Nardin, E.H. et al. Synthetic malaria peptide vaccine elicits high levels of antibodies in vaccinees of defined HLA genotypes. J. Infect. Dis. 182, 1486-1496 (2000).
-
(2000)
J. Infect. Dis
, vol.182
, pp. 1486-1496
-
-
Nardin, E.H.1
-
89
-
-
33947581102
-
Peptide vaccines against cancer, infectious diseases, and conception
-
Naz, R.K. & Dabir, P. Peptide vaccines against cancer, infectious diseases, and conception. Front. Biosci. 12, 1833-1844 (2007).
-
(2007)
Front. Biosci
, vol.12
, pp. 1833-1844
-
-
Naz, R.K.1
Dabir, P.2
|