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Volumn 70, Issue 11, 2007, Pages 2583-2588

Variable number of tandem repeats and pulsed-field gel electrophoresis cluster analysis of enterohemorrhagic Escherichia coli serovar O157 strains

Author keywords

[No Author keywords available]

Indexed keywords

ESCHERICHIA COLI;

EID: 36048974520     PISSN: 0362028X     EISSN: None     Source Type: Journal    
DOI: 10.4315/0362-028X-70.11.2583     Document Type: Article
Times cited : (6)

References (19)
  • 1
    • 85036980437 scopus 로고    scopus 로고
    • Anonymous. (No date.) Genomes, polymorphism and minisatellites with a focus on molecular epidemiology using tandem repeats. Available at: http://minisatellites.u-psud.fr/. Accessed 28 March 2007.
    • Anonymous. (No date.) Genomes, polymorphism and minisatellites with a focus on molecular epidemiology using tandem repeats. Available at: http://minisatellites.u-psud.fr/. Accessed 28 March 2007.
  • 2
    • 85036970599 scopus 로고    scopus 로고
    • Anonymous, Minimum spanning trees for population modeling, p, version 4. Applied Maths, Sint-Martens-Latem, Belgium
    • Anonymous. 2004. Minimum spanning trees for population modeling, p. 157-162. In BioNumerics manual, version 4. Applied Maths, Sint-Martens-Latem, Belgium.
    • (2004) BioNumerics manual , pp. 157-162
  • 3
    • 36048978248 scopus 로고    scopus 로고
    • Enterohemorrhagic Escherichia coli infection in Japan
    • In Japanese, Anonymous
    • Anonymous. 2006. Enterohemorrhagic Escherichia coli infection in Japan. Infect. Agents Surveil. Rep. 27:141-143. (In Japanese.)
    • (2006) Infect. Agents Surveil. Rep , vol.27 , pp. 141-143
  • 4
    • 0023734473 scopus 로고
    • Novel non-templated nucleotide addition reaction catalyzed by prokaryotic and eukaryotic DNA polymerase
    • Clark, J. M. 1988. Novel non-templated nucleotide addition reaction catalyzed by prokaryotic and eukaryotic DNA polymerase. Nucleic Acids Res. 16:9877-9686.
    • (1988) Nucleic Acids Res , vol.16 , pp. 9877-9686
    • Clark, J.M.1
  • 5
    • 33645711624 scopus 로고    scopus 로고
    • Gerner-Smidt, P., K. Hise, J. Kincaid, S. Hunter, S. Polando, E. Hyytiä-Trees, E. M. Ribot, B. Swaminathan, and the PulseNet Taskforce. 2006. PulseNet USA: a five year update. Foodborne Pathog. Dis. 3:9-19.
    • Gerner-Smidt, P., K. Hise, J. Kincaid, S. Hunter, S. Polando, E. Hyytiä-Trees, E. M. Ribot, B. Swaminathan, and the PulseNet Taskforce. 2006. PulseNet USA: a five year update. Foodborne Pathog. Dis. 3:9-19.
  • 6
    • 14944355089 scopus 로고    scopus 로고
    • Establishment of a universal size standard strain for use with the PulseNet standardized pulsed-field gel electrophoresis protocols: Converting the national database to the new size standard
    • Hunter, S. B., P. Vauterin, and M. A. Lambert-Fair. 2005. Establishment of a universal size standard strain for use with the PulseNet standardized pulsed-field gel electrophoresis protocols: converting the national database to the new size standard. J. Clin. Microbiol. 43:1045-1050.
    • (2005) J. Clin. Microbiol , vol.43 , pp. 1045-1050
    • Hunter, S.B.1    Vauterin, P.2    Lambert-Fair, M.A.3
  • 7
    • 33645714578 scopus 로고    scopus 로고
    • Second generation subtyping: A proposed PulseNet protocol for multiple-locus variable-number tandem repeat analysis of Shiga toxin-producing Escherichia coli O157 (STEC O157)
    • Hyytiä-Trees, E., S. C. Smole, P. A. Fields, B. Swaminathan, and F. M. Ribot. 2006. Second generation subtyping: a proposed PulseNet protocol for multiple-locus variable-number tandem repeat analysis of Shiga toxin-producing Escherichia coli O157 (STEC O157). Foodborne Pathog. Dis. 3:118-131.
    • (2006) Foodborne Pathog. Dis , vol.3 , pp. 118-131
    • Hyytiä-Trees, E.1    Smole, S.C.2    Fields, P.A.3    Swaminathan, B.4    Ribot, F.M.5
  • 8
    • 16444380292 scopus 로고    scopus 로고
    • Highly diverse variable number tandem repeat loci in the E. coli O157:H7 and O55:H7 genomes for high-resolution molecular typing
    • Keys, C., S. Kemper, and P. Keim. 2005. Highly diverse variable number tandem repeat loci in the E. coli O157:H7 and O55:H7 genomes for high-resolution molecular typing. J. Appl. Microbiol. 98:928-940.
    • (2005) J. Appl. Microbiol , vol.98 , pp. 928-940
    • Keys, C.1    Kemper, S.2    Keim, P.3
  • 9
    • 22244459534 scopus 로고    scopus 로고
    • Multiple-locus variable number tandem repeats analysis for genetic fingerprinting of pathogenic bacteria
    • Lindstedt, B.-A. 2005. Multiple-locus variable number tandem repeats analysis for genetic fingerprinting of pathogenic bacteria. Electrophoresis 26:2567-2582.
    • (2005) Electrophoresis , vol.26 , pp. 2567-2582
    • Lindstedt, B.-A.1
  • 10
    • 3242673571 scopus 로고    scopus 로고
    • Multiple-locus variable-number tandem-repeats analysis of Escherichia coli O157 using PCR multiplexing and multi-colored capillary electrophoresis
    • Lindstedt, B.-A., T. Vardund, and G. Kapperud. 2004. Multiple-locus variable-number tandem-repeats analysis of Escherichia coli O157 using PCR multiplexing and multi-colored capillary electrophoresis. J. Microbiol. Methods 58:213-222.
    • (2004) J. Microbiol. Methods , vol.58 , pp. 213-222
    • Lindstedt, B.-A.1    Vardund, T.2    Kapperud, G.3
  • 12
    • 0348110225 scopus 로고    scopus 로고
    • Multilocus variable-number tandem repeat analysis distinguishes outbreak and sporadic Escherichia coli O157:H7 isolates
    • Noller, A. C., M. C. McEllistrem, A. G. F. Pacheco, D. J. Boxrud, and L. H. Harrison. 2003. Multilocus variable-number tandem repeat analysis distinguishes outbreak and sporadic Escherichia coli O157:H7 isolates. J. Clin. Microbiol. 41:5389-5397.
    • (2003) J. Clin. Microbiol , vol.41 , pp. 5389-5397
    • Noller, A.C.1    McEllistrem, M.C.2    Pacheco, A.G.F.3    Boxrud, D.J.4    Harrison, L.H.5
  • 13
    • 32344431581 scopus 로고    scopus 로고
    • Locus-specific mutational events in a multilocus variable-number tandem repeat analysis of Escherichia coli O157:H7
    • Noller, A. C., M. C. McEllistrem, K. A. Shutt, and L. H. Harrison. 2006. Locus-specific mutational events in a multilocus variable-number tandem repeat analysis of Escherichia coli O157:H7. J. Clin. Microbiol. 44:347-377.
    • (2006) J. Clin. Microbiol , vol.44 , pp. 347-377
    • Noller, A.C.1    McEllistrem, M.C.2    Shutt, K.A.3    Harrison, L.H.4
  • 14
    • 0031254683 scopus 로고    scopus 로고
    • Emerging foodborne diseases: An evolving public health challenge
    • Tauxe, R. V. 1997. Emerging foodborne diseases: an evolving public health challenge. Emerg. Infect. Dis. 3:425-434.
    • (1997) Emerg. Infect. Dis , vol.3 , pp. 425-434
    • Tauxe, R.V.1
  • 15
    • 33744982094 scopus 로고    scopus 로고
    • Effect of repeat copy number on variable-number tandem repeat mutations in Escherichia coli O157:H7
    • Vogler, A. J., C. Keys, Y. Nemoto, R. E. Colman, Z. Jay, and P. Keim. 2006. Effect of repeat copy number on variable-number tandem repeat mutations in Escherichia coli O157:H7. J. Bacteriol. 188:4253-4263.
    • (2006) J. Bacteriol , vol.188 , pp. 4253-4263
    • Vogler, A.J.1    Keys, C.2    Nemoto, Y.3    Colman, R.E.4    Jay, Z.5    Keim, P.6
  • 16
    • 33646367903 scopus 로고    scopus 로고
    • Comparison between agarose gel electrophoresis and capillary electrophoresis for variable numbers of tandem repeat typing of Mycobacterium tuberculosis
    • Yokoyama, E., K. Kishida, M. Uchimura, and S. Ichinohe. 2006. Comparison between agarose gel electrophoresis and capillary electrophoresis for variable numbers of tandem repeat typing of Mycobacterium tuberculosis. J. Microbiol. Methods 65:425-431.
    • (2006) J. Microbiol. Methods , vol.65 , pp. 425-431
    • Yokoyama, E.1    Kishida, K.2    Uchimura, M.3    Ichinohe, S.4
  • 17
    • 34249700248 scopus 로고    scopus 로고
    • Improved differentiation of Mycobacterium tuberculosis strains, including many Beijing genotype strains, using a new combination of variable number of tandem repeats loci
    • Yokoyama, E., K. Kishida, M. Uchimura, and S. Ichinohe. 2007. Improved differentiation of Mycobacterium tuberculosis strains, including many Beijing genotype strains, using a new combination of variable number of tandem repeats loci. Infect. Genet. Evol. 7:499-508.
    • (2007) Infect. Genet. Evol , vol.7 , pp. 499-508
    • Yokoyama, E.1    Kishida, K.2    Uchimura, M.3    Ichinohe, S.4
  • 18
    • 34247554358 scopus 로고    scopus 로고
    • Prevalence and genetic properties of Salmonella enterica serovar Typhimurium definitive phage type 104 isolated from Rattus norvegicus and Rattus rattus house rats in Yokohama City
    • Yokoyama, E., S. Maruyama, H. Kabeya, S. Hara, S. Sata, T. Kuroki, and T. Yamamoto. 2007. Prevalence and genetic properties of Salmonella enterica serovar Typhimurium definitive phage type 104 isolated from Rattus norvegicus and Rattus rattus house rats in Yokohama City, Japan. Appl. Environ. Microbiol. 73:2624-2630.
    • (2007) Japan. Appl. Environ. Microbiol , vol.73 , pp. 2624-2630
    • Yokoyama, E.1    Maruyama, S.2    Kabeya, H.3    Hara, S.4    Sata, S.5    Kuroki, T.6    Yamamoto, T.7
  • 19
    • 33748369139 scopus 로고    scopus 로고
    • Yokoyama, E, and M. Uchimura. 2006. Optimal settings of finger-print type analyzing computer software for the analysis of enterohemorrhagic Escherichia coli pulsed-field gel electrophoresis patterns. Epidemiol. Infect. 134:1004-1014
    • Yokoyama, E., and M. Uchimura. 2006. Optimal settings of finger-print type analyzing computer software for the analysis of enterohemorrhagic Escherichia coli pulsed-field gel electrophoresis patterns. Epidemiol. Infect. 134:1004-1014.


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.