메뉴 건너뛰기




Volumn 134, Issue 5, 2006, Pages 1004-1014

Optimal settings of fingerprint-type analysing computer software for the analysis of enterohaemorrhagic Escherichia coli pulsed-field gel electrophoresis patterns

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; BACTERIAL STRAIN; CALCULATION; CALIBRATION; CLUSTER ANALYSIS; COMPUTER PROGRAM; CONTROLLED STUDY; CORRELATION COEFFICIENT; DNA FINGERPRINTING; ENTEROHEMORRHAGIC ESCHERICHIA COLI; EPIDEMIC; NONHUMAN; PULSED FIELD GEL ELECTROPHORESIS;

EID: 33748369139     PISSN: 09502688     EISSN: 14694409     Source Type: Journal    
DOI: 10.1017/S0950268806006145     Document Type: Article
Times cited : (8)

References (18)
  • 1
    • 0032619083 scopus 로고    scopus 로고
    • Isolation of shiga toxin-producing Escherichia coli O157:H7 from processed salmon roe associated with the outbreak in Japan, 1998 and a molecular typing of the isolates by pulsed-field gel electrophoresis
    • [in Japanese with English summary]
    • Asai Y, et al. Isolation of shiga toxin-producing Escherichia coli O157:H7 from processed salmon roe associated with the outbreak in Japan, 1998 and a molecular typing of the isolates by pulsed-field gel electrophoresis [in Japanese with English summary]. Journal of the Japanese Association of Infectious Diseases 1999; 73: 20-24.
    • (1999) Journal of the Japanese Association of Infectious Diseases , vol.73 , pp. 20-24
    • Asai, Y.1
  • 2
    • 0041883082 scopus 로고    scopus 로고
    • A diffuse outbreak of enterohemorrhagic Escherichia coli O157:H7 related to Japanese-style pickles in Saitama, Japan
    • [in Japanese with English summary]
    • Ozeki Y, et al. A diffuse outbreak of enterohemorrhagic Escherichia coli O157:H7 related to Japanese-style pickles in Saitama, Japan [in Japanese with English summary]. Journal of the Japanese Association of Infectious Diseases 2003; 77: 493-498.
    • (2003) Journal of the Japanese Association of Infectious Diseases , vol.77 , pp. 493-498
    • Ozeki, Y.1
  • 3
    • 33748368124 scopus 로고    scopus 로고
    • A diffuse outbreak by enterohemorrhagic Escherichia coli serovar O157:H7 associated with contaminated lightly roasted beef
    • [in Japanese]
    • Yokoyama E, Uchimura M, Koiwai K. A diffuse outbreak by enterohemorrhagic Escherichia coli serovar O157:H7 associated with contaminated lightly roasted beef [in Japanese]. Japanese Journal of Food Microbiology 2004; 21: 156-159.
    • (2004) Japanese Journal of Food Microbiology , vol.21 , pp. 156-159
    • Yokoyama, E.1    Uchimura, M.2    Koiwai, K.3
  • 4
    • 0036777592 scopus 로고    scopus 로고
    • PulseNet Japan: Surveillance system for the early detection of diffuse outbreak based on the molecular epidemiological method
    • [in Japanese with English summary]
    • Watanabe H, et al. PulseNet Japan: Surveillance system for the early detection of diffuse outbreak based on the molecular epidemiological method [in Japanese with English summary]. Journal of the Japanese Association of Infectious Diseases 2002; 76: 842-848.
    • (2002) Journal of the Japanese Association of Infectious Diseases , vol.76 , pp. 842-848
    • Watanabe, H.1
  • 5
    • 0033664479 scopus 로고    scopus 로고
    • Molecular typing of methicillin-resistant Staphylococcus aureus by pulsed-field gel electrophoresis: Comparison of results obtained in a multilaboratory effort using identical protocols and MRSA strains
    • Chung M, et al. Molecular typing of methicillin-resistant Staphylococcus aureus by pulsed-field gel electrophoresis: Comparison of results obtained in a multilaboratory effort using identical protocols and MRSA strains. Microbial Drug Resistance 2000; 6: 189-198.
    • (2000) Microbial Drug Resistance , vol.6 , pp. 189-198
    • Chung, M.1
  • 6
    • 0029134774 scopus 로고
    • Interpreting chromosomal DNA restriction patterns produced by pulsed-field gel electrophoresis: Criteria for bacterial strain typing
    • Tenovor FC, et al. Interpreting chromosomal DNA restriction patterns produced by pulsed-field gel electrophoresis: Criteria for bacterial strain typing. Journal of Clinical Microbiology 1995; 33: 2233-2239.
    • (1995) Journal of Clinical Microbiology , vol.33 , pp. 2233-2239
    • Tenovor, F.C.1
  • 7
    • 0031978085 scopus 로고    scopus 로고
    • Computerized analysis of restriction fragment length polymorphism patterns: Comparative evaluation of two commercial software packages
    • Smidt PG, et al. Computerized analysis of restriction fragment length polymorphism patterns: Comparative evaluation of two commercial software packages. Journal of Clinical Microbiology 1998; 36: 1318-1323.
    • (1998) Journal of Clinical Microbiology , vol.36 , pp. 1318-1323
    • Smidt, P.G.1
  • 8
    • 0034466801 scopus 로고    scopus 로고
    • Suitability of PCR fingerprinting, infrequent-restriction-site PCR, and pulsed-field gel electrophoresis, combined with computerized gel analysis, in library typing of Salmonella enterica serovar Enteritidis
    • Garaizar J, et al. Suitability of PCR fingerprinting, infrequent-restriction-site PCR, and pulsed-field gel electrophoresis, combined with computerized gel analysis, in library typing of Salmonella enterica serovar Enteritidis. Applied and Environmental Microbiology 2000; 66: 5273-5281.
    • (2000) Applied and Environmental Microbiology , vol.66 , pp. 5273-5281
    • Garaizar, J.1
  • 9
    • 0035382473 scopus 로고    scopus 로고
    • Comparative evaluation of three commercial software packages for analysis of DNA polymorphism patterns
    • Rementeria A, et al. Comparative evaluation of three commercial software packages for analysis of DNA polymorphism patterns. Clinical Microbiology and Infection 2001; 7: 331-336.
    • (2001) Clinical Microbiology and Infection , vol.7 , pp. 331-336
    • Rementeria, A.1
  • 10
    • 0038506977 scopus 로고    scopus 로고
    • Optimization of computer software settings improves accuracy of pulsed-field gel electrophoresis macrorestriction fragment pattern analysis
    • Duck WM, et al. Optimization of computer software settings improves accuracy of pulsed-field gel electrophoresis macrorestriction fragment pattern analysis. Journal of Clinical Microbiology 2003; 41: 3035-3042.
    • (2003) Journal of Clinical Microbiology , vol.41 , pp. 3035-3042
    • Duck, W.M.1
  • 11
    • 0036266631 scopus 로고    scopus 로고
    • Multicenter comparison of three different analytical systems for evaluation of DNA banding patterns from Cryptococcus neoformans
    • Cardinali G, et al. Multicenter comparison of three different analytical systems for evaluation of DNA banding patterns from Cryptococcus neoformans. Journal of Clinical Microbiology 2002; 40: 2095-2100.
    • (2002) Journal of Clinical Microbiology , vol.40 , pp. 2095-2100
    • Cardinali, G.1
  • 12
    • 0034103542 scopus 로고    scopus 로고
    • Computer-assisted analysis and epidemiological value of genotyping methods for Campylobacter jejuni and Campylobacter coli
    • de Boer P, et al. Computer-assisted analysis and epidemiological value of genotyping methods for Campylobacter jejuni and Campylobacter coli. Journal of Clinical Microbiology 2000; 38: 1940-1946.
    • (2000) Journal of Clinical Microbiology , vol.38 , pp. 1940-1946
    • de Boer, P.1
  • 13
    • 0031850826 scopus 로고    scopus 로고
    • Study of the related ness of isolates of Shigella flexneri and Shigella sonnei obtained in 1986 and 1987 and in 1994 and 1995 from Hong Kong
    • Houang ETS, et al. Study of the related ness of isolates of Shigella flexneri and Shigella sonnei obtained in 1986 and 1987 and in 1994 and 1995 from Hong Kong. Journal of Clinical Microbiology 1998; 36: 2404-2407.
    • (1998) Journal of Clinical Microbiology , vol.36 , pp. 2404-2407
    • Houang, E.T.S.1
  • 14
    • 0000682591 scopus 로고
    • On the coefficient of racial likeliness
    • Pearson K. On the coefficient of racial likeliness. Biometrika 1926; 18: 105-117.
    • (1926) Biometrika , vol.18 , pp. 105-117
    • Pearson, K.1
  • 15
    • 0000250265 scopus 로고
    • Measures of the amount of ecological association between species
    • Dice LR. Measures of the amount of ecological association between species. Journal of Ecology 1945; 26: 297-302.
    • (1945) Journal of Ecology , vol.26 , pp. 297-302
    • Dice, L.R.1
  • 16
    • 0037952995 scopus 로고    scopus 로고
    • Evaluation of pulsed-field gel electrophoresis as a tool for determining the degree of genetic relatedness between strains of Escherichia coli O157:H7
    • Davis MA, et al. Evaluation of pulsed-field gel electrophoresis as a tool for determining the degree of genetic relatedness between strains of Escherichia coli O157:H7. Journal of Clinical Microbiology 2003; 41: 1843-1849.
    • (2003) Journal of Clinical Microbiology , vol.41 , pp. 1843-1849
    • Davis, M.A.1
  • 18
    • 14944355089 scopus 로고    scopus 로고
    • Establishment of a universal size standard strain for use with the PulseNet standardized pulsed-field gel electrophoresis protocols: Converting the national database to the new size standard
    • Hunter SB, et al. Establishment of a universal size standard strain for use with the PulseNet standardized pulsed-field gel electrophoresis protocols: Converting the national database to the new size standard. Journal of Clinical Microbiology 2005; 43: 1045-1050.
    • (2005) Journal of Clinical Microbiology , vol.43 , pp. 1045-1050
    • Hunter, S.B.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.