Comparison of the expression profiles of susceptible and resistant Eucalyptus grandis exposed to Puccinia psidii Winter using SAGE

Functional Plant Biology

Volumn 34, Issue 11, 2007, Pages 1010-1018

  Moon, David H ^a   Salvatierra, Guillermo R ^a   Caldas, Danielle G G ^a   Gallo De Carvalho, Mayra C C ^a   Carneiro, Raphael T ^a   Franceschini, Lívia M ^a   Oda, Shinitiro ^b   Labate, Carlos A ^a  

^a UNIVERSITY OF SÃO PAULO   (Brazil)

^b NSK Brasil Ltd   (Brazil)

Author keywords

Cellular polarisation; Chitinase; Hypersensitive response; Senescence

Indexed keywords

BIOSYNTHESIS; DETOXIFICATION; DISEASES; GENE EXPRESSION; PAPER AND PULP INDUSTRY; POPULATION DYNAMICS;

CELLULAR POLARIZATION; CHITINASE; HYPERSENSITIVE RESPONSE; SENESCENCE;

FORESTRY;

COMPARATIVE STUDY; DETOXIFICATION; DISEASE RESISTANCE; ENZYME; EVERGREEN TREE; FUNGUS; GENE EXPRESSION; HYBRID; PHYSIOLOGICAL RESPONSE; RUST DISEASE; SENESCENCE;

DISEASES; EUCALYPTUS GRANDIS; GENES;

EUCALYPTUS; EUCALYPTUS GRANDIS; PUCCINIA PSIDII;

EID: 35948990088     PISSN: 14454408     EISSN: None     Source Type: Journal    
DOI: 10.1071/FP07094     Document Type: Article

References (69)

1. Alfenas AC, Valle LAC, Xavier AA, Brommonschenkel SH, Grattapaglia D, Silva CC, Bertolucci FL, Penchel R (1997) Eucalyptus rust: genetic variability of elite clones and histological characterization of the resistance reaction. In 'Proceedings of the IUFRO conference on silviculture and improvement of eucalypts, Salvador, Brazil'. Vol 2, 60-64.
2. Andralojc PJ, Dawson GW, Parry MA, Keys AJ (1994) Incorporation of carbon from photosynthetic products into 2-carboxyarabinitol-1-phosphate and 2-carboxyarabinitol. Biochemical Journal 304, 781-786.
3. Apostol I, Heinstein PF, Low PS (1989) Rapid stimulation of an oxidative burst during elicitation of cultured plant cells. Plant Physiology 90, 109-116.
4. Azevedo C, Betsuyaku S, Peart J, Takahashi A, Noel L, Sadanandom A, Casais C, Parker J, Shirasu K (2006) Role of SGT1 in resistance protein accumulation in plant immunity. EMBO Journal 25, 2007-2016. doi: 10.1038/sj.emboj.7601084
5. Barbosa-da Silva A, Wanderley-Nogueira AC, Silva RRM, Berlarmino LC, Soares-Cavalcanti NM, Banko-Iseppon A (2005) In silico survey of resistance (R) genes in Eucalyptus transcriptome. Genetics and Molecular Biology 28(Suppl), 562-574.
6. BRACELPA (2006) 'O setor brasileiro de celulose e papel.' (Associaçao Brasiliera de Celulose e Papel: São Paolo) Available at www.bracelpa.org.br [Verified 26 September 2007].
7. Brueggeman R, Drader T, Kleinhofs A (2006) The barley serine/threonine kinase gene Rpg1 providing resistance to stem rust belongs to a gene family with five other members encoding kinase domains. Theoretical and Applied Genetics 113, 1147-1158. doi: 10.1007/s00122-006-0374-3
8. Burlat V, Kwon M, Davin LB, Lewis NG (2001) Dirigent proteins and dirigent sites in lignifying tissues. Phytochemistry 57, 883-897. doi: 10.1016/S0031-9422(01)00117-0
9. Butt A, Mousley C, Morris K, Beynon J, Can C, Holub E, Greenberg JT, Buchanan-Wollaston V (1998) Differential expression of a senescence-enhanced metallothionein gene in Arabidopsis in response to isolates of Peronospora parasitica and Pseudomonas syringae. Plant Journal 16, 209-221. doi: 10.1046/j.1365-313x.1998.00286.x
10. 4 metabolism and putative antisense transcripts. Plant Molecular Biology 63, 745-762. doi: 10.1007/s11103-006-9121-z
11. Cantón FR, Suárez MF, Cánovas FM (2005) Molecular aspects of nitrogen mobilization and recycling in trees. Photosynthesis Research 83, 265-278. doi: 10.1007/s11120-004-9366-9
12. Chavrier P, Goud B (1999) The role of ARF and Rab GTPases in membrane transport. Current Opinion in Cell Biology 11, 466-475. doi: 10.1016/S0955-0674(99)80067-2
13. Chiasson D, Ekengren SK, Martin GB, Dobney SL, Snedden WA (2005) Calmodulin-like proteins from Arabidopsis and tomato are involved in host defense against Pseudomonas syringae pv. tomato. Plant Molecular Biology 58, 887-897. doi: 10.1007/s11103-005-8395-x
14. Choi D, Kim HM, Yun HK, Park J-A, Kim WT, Bok SH (1996) Molecular cloning of a metallothionein-like gene from Nicotiana glutinosa L. and its induction by wounding and Tobacco Mosaic Virus infection. Plant Physiology 112, 353-359. doi: 10.1104/pp.112.1.353
15. Chye M, Huang B, Zee SY (1999) Isolation of a gene encoding Arabidopsis membrane-associated acyl-CoA binding protein and immunolocalisation of its gene product. Plant Journal 18, 205-214. doi: 10.1046/j.1365-313X.1999.00443.x
16. Clemens S (2006) Evolution and function of phytochelatin synthases. Journal of Plant Physiology 163, 319-332. doi: 10.1016/j.jplph.2005.11.010
17. Collins N, Drake J, Ayliffe M, Sun Q, Ellis J, Hulbert S, Pryor T (1999) Molecular characterization of the maize Rp1-D rust resistant haplotype and its mutants. Plant Cell 11, 1365-1376. doi: 10.2307/3870755
18. Coutinho TA, Wingfield MJ, Alfenas AC, Crous PW (1998) Eucalyptus rust: a disease with the potential for serious international implications. Plant Disease 82, 819-825. doi: 10.1094/PDIS.1998.82.7.819
19. DeYoung BJ, Innes RW (2006) Plant NBS-LRR proteins in pathogen sensing and host defense (Review). Nature Immunology 7, 1243-1249. doi: 10.1038/ni1410
20. Ermolayev V, Weschke W, Manteuffel R (2003) Comparison of Al-induced gene expression in sensitive and tolerant soybean cultivars. Journal of Experimental Botany 54, 2745-2756. doi: 10.1093/jxb/erg302
21. Espartero J, Sanchez-Aguayo I, Pardo JM (1995) Molecular characterization of glyoxalase-I from a higher plant; upregulation by stress. Plant Molecular Biology 29, 1223-1233. doi: 10.1007/BF00020464
22. Ezaki B, Sasaki K, Matsumoto H, Nashima S (2005) Functions of two genes in aluminium (Al) stress resistance: repression of oxidative damage by the AtBCB gene and promotion of efflux of Al ions by the NtGDI1 gene. Journal of Experimental Biology 56, 2661-2671.
23. Ferreira FA, Silva ARC (1982) Comportamento de procedências de Eucalyptus grandis e de E. saligna à ferrugem (Puccinia psidii). Fitopatologia Brasileira 7, 23-27.
24. Fregene M, Matsumura H, Akano A, Dixon A, Terauchi R (2004) Serial analysis of gene expression (SAGE) of host-plant resistance to the cassava mosaic disease (CMD). Plant Molecular Biology 56, 563-571. doi: 10.1007/s11103-004-3477-8
25. Irie T, Matsumura H, Terauchi R, Saitoh H (2003) Serial analysis of gene expression (SAGE) of Magnaporthe grisea: genes involved in appressorium formation. Molecular Genetics and Genomics 270, 181-189. doi: 10.1007/s00438-003-0911-6
26. Israelsson M, Eriksson ME, Hertzberg M, Aspeborg H, Nilsson P, Moritz T (2003) Changes in gene expression in the wood-forming tissue of transgenic hybrid aspen with increased secondary growth. Plant Molecular Biology 52, 893-903. doi: 10.1023/A:1025097410445
27. Jeanneau M, Gerentes D, Foueillassar X, Zivy M, Vidal J, Toppan A, Perez P (2002) Improvement of drought tolerance in maize: towards the functional validation of the Zm-Asr1 gene and increase of water use efficiency by over-expressing C4-PEPC. Biochimie 84, 1127-1135. doi: 10.1016/S0300-9084(02)00024-X
28. Juan D, Hong-Li X, De-Qiang Z, Min-Jie W, Ying-Zhang L, Ke-Ming C, Meng-Zhu L (2006) Regeneration of the secondary vascular system in poplar as a novel system to investigate gene expression by a proteomic approach. Proteomics 6, 881-895. doi: 10.1002/pmic.200401348
29. Jung S-H, Lee J-Y, Lee D-H (2003) Use of SAGE technology to reveal changes in gene expression in Arabidopsis leaves undergoing cold stress. Plant Molecular Biology 52, 553-567. doi: 10.1023/A:1024866716987
30. Junghans DT, Alfenas AC, Brommonschenkel SH, Oda S, Mello EJ, Grattapaglia D (2003) Resistance to rust (Puccinia psidii Winter) in Eucalyptus: mode of inheritance and mapping of a major gene with RAPD markers. Theoretical and Applied Genetics 108, 175-180. doi: 10.1007/s00122-003-1415-9
31. Kal AJ, Van Zonneveld AJ, Benes V, Van den Berg M, Groot Koerkamp M, et al. (1999) Dynamics of gene expression revealed by comparison of SAGE transcript profiles from yeast grown on two different carbon sources. Molecular Biology of the Cell 10, 1859-1872.
32. Kariola T, Brader G, Helenius E, Li J, Heino P, Palva ET (2006) EARLY RESPONSIVE TO DEHYDRATION 15, a negative regulator of abscisic acid responses in Arabidopsis. Plant Physiology 142, 1559-1573. doi: 10.1104/pp.106.086223
33. Kolmer JA (1996) Genes of resistance to wheat leaf rust. Annual Review of Phytopathology 34, 435-455. doi: 10.1146/annurev.phyto.34.1.435
34. Kuzniak E, Sk?odowska M (2005) Fungal pathogen-induced changes in the antioxidant systems of leaf peroxisomes from infected tomato plants. Planta 222, 192-200. doi: 10.1007/s00425-005-1514-8
35. Lorenz WW, Dean JFD (2002) SAGE profiling and demonstration of differential gene expression along the axial developmental gradient of lignifying xylem in loblolly pine (Pinus taeda). Tree Physiology 22, 301-310.
36. Ludwig AA, Tenhaken R (2001) A new cell wall located N-rich protein is strongly induced during the hypersensitive response in Glycine max L. European Journal of Plant Pathology 107, 323-336. doi: 10.1023/A:1011202225323
37. Menden B, Kohlhoff M, Moerschbacher BM (2007) Wheat cells accumulate a syringyl-rich lignin during the hypersensitive resistance response. Phytochemistry 68, 513-520. doi: 10.1016/j.phytochem.2006.11.011
38. Mir G, Domenech J, Huguet G, Guo W, Goldsbrough P, Atrian S, Molinas M (2004) A plant type 2 metallothionein (MT) from cork tissue responds to oxidative stress. Journal of Experimental Botany 55, 2483-2493. doi: 10.1093/jxb/erh254
39. Moffatt BA, Wang L, Allen MS, Stevens YY, Qin W, Snider J, von Schwartzenberg K (2000) Adenosine kinase of Arabidopsis. Kinetic properties and gene expression. Plant Physiology 124, 1775-1785. doi: 10.1104/pp.124.4.1775
40. Moffatt BA, Stevens YY, Allen MS, Snider JD, Pereira LA, Todorova MI, Summers PS, Weretilnyk EA, Martin-McCaffrey L, Wagner C (2002) Adenosine kinase deficiency is associated with developmental abnormalities and reduced transmethylation. Plant Physiology 128, 812-821. doi: 10.1104/pp.010880
41. Mohammadi M, Roohparvar R, Torabi M (2002) Induced chitinase activity in resistant wheat leaves inoculated with an incompatible race of Puccinia striiformis f. sp. tritici, the causal agent of yellow rust disease. Mycopathologia 154, 119-126. doi: 10.1023/A:1016039517933
42. Mora AL, Garcia CH (2000) 'Eucalypt Cultivation in Brazil.' (Sociedade Brasileira de Silvicultura: São Paulo) 112 pp.
43. Munch-Garthoff S, Neuhaus JM, Boller T, Kemmerling B, Kogel KH (1997) Expression of beta-1,3-glucanase and chitinase in healthy, stem-rust-affected and elicitor-treated near-isogenic wheat lines showing Sr5-or Sr24-specified race-specific rust resistance. Planta 201, 235-244. doi: 10.1007/BF01007709
44. Oda Y, Mimura T, Hasezawa S (2005) Regulation of secondary cell wall development by cortical microtubules during tracheary element differentiation in Arabidopsis cell suspensions. Plant Physiology 137, 1027-1036. doi: 10.1104/pp.104.052613
45. Oksanen E, Haikkio E, Sober J, Karnosky DF (2003) Ozone-induced H2O2 accumulation in field-grown aspen and birch is linked to foliar ultrastructure and peroxisomal activity. New Phytologist 161, 791-799.
46. Paiva NL, Sun Y, Dixon RA, VanEtten HD, Hrazdina G (1994) Molecular cloning of isoflavone reductase from pea (Pisum sativum L.): evidence for a 3R-isoflavone intermediate in (+)-Pisatin biosynthesis. Archives of Biochemistry and Biophysics 312, 501-510. doi: 10.1006/abbi.1994.1338
47. Panikulangara TJ, Eggers-Schumacher G, Wunderlich M, Stransky H, Schoffl F (2004) Galactinol synthase 1. A novel heat shock factor target gene responsible for heat-induced synthesis of raffinose family oligosaccharides in Arabidopsis. Plant Physiology 136, 3148-3158. doi: 10.1104/pp.104.042606
48. Paux E, Tamasloukht M, Ladouce N, Sivadon P, Grima-Pettenati J (2004) Identification of genes preferentially expressed during wood formation in Eucalyptus. Plant Molecular Biology 55, 263-280. doi: 10.1007/s11103-004-0621-4
49. Pic E, Teyssendier de la Serve B, Tardieu F, Turc O (2002) Leaf senescence induced by mildwater deficit follows the same sequence of macroscopic, biochemical and molecular events as monocarpic senescence in pea. Plant Physiology 128, 236-246. doi: 10.1104/pp.128.1.236
50. Prasad BC, Gururaj HB, Kumar V, Giridhar P, Ravishankar GA (2006) Valine pathway is more crucial than phenyl propanoid pathway in regulating capsaicin biosynthesis in Capsicum frutescens mill. Journal of Agricultural and Food Chemistry 54, 6660-6666. doi: 10.1021/jf061040a
51. Ranik M, Myburg AA (2006) Six new cellulose synthase genes from Eucalyptus are associated with primary and secondary cell wall biosynthesis. Tree Physiology 26, 545-556.
52. Ren D, Yang H, Zhang S (2002) Cell death mediated by MAPK is associated with hydrogen peroxide production in Arabidopsis. Journal of Biological Chemistry 277, 559-565. doi: 10.1074/jbc.M109495200
53. Rison SCG, Hodgman TC, Thornton JM (2000) Comparison of functional annotation schemes for genomes. Functional & Integrative Genomics 1, 56-69.
54. Sauter M, Rzewuski G, Marwedel T, Lorbiecke R (2002) The novel ethylene-regulated gene OsUsp1 from rice encodes a member of a plant protein family related to prokaryotic universal stress proteins. Journal of Experimental Botany 53, 2325-2331. doi: 10.1093/jxb/erf096
55. Schmelzer E (2002) Cell polarization, a crucial process in fungal defense. Trends in Plant Science 7, 411-415. doi: 10.1016/S1360-1385(02)02307-5
56. Schütz I, Gus-Mayer S, Schmelzer E (2006) Profilin and Rop GTPases are localized at infection sites of plant cells. Protoplasma 227, 229-235. doi: 10.1007/s00709-005-0151-1
57. Takabatake R, Karita E, Seo S, Mitsuhara I, Kuchitsu K, Ohashi Y (2007) Pathogen-induced calmodulin isoforms in basal resistance against bacterial and fungal pathogens in tobacco. Plant & Cell Physiology 48, 414-423. doi: 10.1093/pcp/pcm011
58. Travert S, Valerio L, Fouraste I, Boudet AM, Teulieres C (1997) Enrichment in specific soluble sugars of two Eucalyptus cell-suspension cultures by various treatments enhances their frost tolerance via a noncolligative mechanism. Plant Physiology 114, 1433-1442.
59. Turgeon R, Gowan E (1992) Sugar synthesis and phloem loading in Coleus blumei leaves. Planta 187, 388-394. doi: 10.1007/BF00195663
60. Vandenabeele S, Van Der Kelen K, Dat J, Gadjev I, Boonefaes T, et al. (2003) A comprehensive analysis of hydrogen peroxide-induced gene expression in tobacco. Proceedings of the National Academy of Sciences of the United States of America 100, 16113-16118. doi: 10.1073/pnas. 2136610100
61. Velculescu VE, Zhang L, Vogelstein B, Kinzler KW (1995) Serial analysis of gene expression. Science 270, 484-487. doi: 10.1126/science.270.5235.484
62. Vernoud V, Horton AC, Yang Z, Nielsen E (2003) Analysis of the small GTPase gene superfamily of Arabidopsis. Plant Physiology 131, 1191-1208. doi: 10.1104/pp.013052
63. Walz C, Giavalisco P, Schad M, Juenger M, Klose J, Kehr J (2004) Proteomics of curcurbit phloem exudate reveals a network of defence proteins. Phytochemistry 65, 1795-1804. doi: 10.1016/j.phytochem.2004.04.006
64. Wang C, Zien CA, Afitlhile M, Welti R, Hildebrand DF, Wang X (2000) Involvement of phospholipase D in wound-induced accumulation of jasmonic acid in Arabidopsis. Plant Cell 12, 2237-2246. doi: 10.2307/3871117
65. Yang C, Chen Y, Jauh GY, Wang C (2005) A lily ASR protein involves abscisic acid signalling and confers drought and salt resistance in Arabidopsis. Plant Physiology 139, 836-846. doi: 10.1104/pp.105.065458
66. Yang T, Poovaiah BW (2000) Arabidopsis chloroplast chaperonin 10 is a calmodulin-binding protein. Biochemical and Biophysical Research Communications 275, 601-607. doi: 10.1006/bbrc.2000.3335
67. Yu GX, Braun E, Wise RP (2001) Rds and Rih mediate hypersensitive cell death independent of gene-for-gene resistance to the oat crown rust pathogen Puccinia coronata f. sp. avenae. Molecular Plant-Microbe Interactions 14, 1376-1383. doi: 10.1094/MPMI.2001.14.12.1376
68. Zeng Y, Yang T (2002) RNA isolation from highly viscous samples rich in polyphenols and polysaccharides. Plant Molecular Biology Reporter 20, 417a-417e.
69. Zhang Y, Shih DS (2007) Isolation of an osmotin-like protein gene from strawberry and analysis of the response of this gene to abiotic stresses. Journal of Plant Physiology 164, 68-77. doi: 10.1016/j.jplph.2006. 02.002