Molecular systematics of Dolichopodidae (Diptera) inferred from COI and 12S rDNA gene sequences based on European exemplars

Invertebrate Systematics

Volumn 21, Issue 5, 2007, Pages 453-470

  Bernasconi, Marco Valerio ^a   Pollet, Marc ^b,c   Ward, Paul Irvine ^a  

^a UNIVERSITY OF ZURICH   (Switzerland)

^b GHENT UNIVERSITY   (Belgium)

^c ROYAL BELGIAN INSTITUTE OF NATURAL SCIENCES   (Belgium)

Author keywords

[No Author keywords available]

Indexed keywords

CLASSIFICATION; FLY; GENETIC ANALYSIS; MOLECULAR ANALYSIS; MORPHOLOGY; PHYLOGENY; TAXONOMY;

EURASIA; EUROPE;

ARGYRA; CAMPSICNEMUS; CHRYSOTUS; DIPTERA; DOLICHOPODIDAE; DOLICHOPUS; GYMNOPTERNUS; HERCOSTOMUS; HYDROPHORINAE; MACHAERIUM; MEDETERA; PELOROPEODINAE; RHAPHIUM; SCIAPUS; SYMPYCNINAE; SYNTORMON; TEUCHOPHORUS;

EID: 35948977291     PISSN: 14455226     EISSN: None     Source Type: Journal    
DOI: 10.1071/IS06043     Document Type: Article

References (69)

1. Aldrich, J. M. (1905). A catalogue of North American Diptera. Smithsonian Miscellaneous Collections 46(2), 1-680.
2. Beati, L., and Keirans, J. E. (2001). Analysis of the systematic relationships among ticks of the genera Rhipicephalus and Boophilus (Acari: Ixodidae) based on mitochondrial 12S ribosomal DNA gene sequences and morphological characters. The Journal of Parasitology 87, 32-48.
3. Baker, R. H., and DeSalle, R. (1997). Multiple sources of character information and the phylogeny of Hawaiian drosophilids. Systematic Biology 46, 654-673.
4. Becker, T. (1917-1918). Dipterologische Studien. Dolichopodidae. A. Paläarktischen Region. Nova Acta Academiae Caesareae Leopodinisch-Carolinae Germanicae Naturae Curiosorum 102(1917), 113-361;
5. 103(1918), 203-315;
6. 104(1918), 35-214.
7. Becker, T. (1922a). Dipterologische Studien. Dolichopodidae. B. Nearktische und Neotropische Region. Abhandlungen der Zoologisch-Botanischen Gesellschaft in Wein 13, 1-394.
8. Becker, T. (1922b). Dipterologische Studien. Dolichopodidae. Dolichopodidae der Indo-Australische Region. Capita Zoologica 1(4), 1-247.
9. Becker, T. (1923). Dipterologische Studien. Dolichopodidae. D. Aethiopische Region. Entomologische Mitteilungen 12, 1-50.
10. Bernasconi, M. V., Pawlowski, J., Valsangiacomo, C., Piffaretti, J.-C., and Ward, P. I. (2000a). Phylogeny of the Scathophagidae (Diptera, Calyptratae) based on mitochondrial DNA sequences. Molecular Phylogenetics and Evolution 16, 308-315.
11. Bernasconi, M. V., Valsangiacomo, C., Piffaretti, J.-C., and Ward, P. I. (2000b). Phylogenetic relationships among Muscoidea (Diptera, Calyptratae) based on mitochondrial DNA sequences. Insect Molecular Biology 9, 67-74.
12. Bernasconi, M. V., Pawlowski, J., Valsangiacomo, C., Piffaretti, J. C., and Ward, P. I. (2001). Phylogeny of the genus Scathophaga (Diptera: Scathophagidae) inferred from mitochondrial DNA sequences. Canadian Journal of Zoology 79, 517-524.
13. Bernasconi, M. V., Casati, S., Péter, O., and Piffaretti, J.-C. (2002). Rhipicephalus ticks infected with Rickettsia and Coxiella in Southern Switzerland (Canton Ticino). Infection, Genetics and Evolution 2, 111-120.
14. Bernasconi, M. V., Pollet, M., Varini-Ooijen, M., and Ward, P. I. (2007). Phylogeny of European Dolichopus and Gymnopternus (Diptera, Dolichopodidae) and the significance of morphological characters inferred from molecular data. European Journal of Entomology 104(3), 601-617.
15. Bickel, D. J. (1985). A revision of the Nearctic Medetera (Diptera: Dolichopodidae). Technical Bulletin 1692, US Department of Agriculture, Washington, DC, USA.
16. Bickel, D. J. (1986). Australian species of Systenus (Diptera: Dolichopodidae). Records of the Australian Museum 38(5), 263-270.
17. Bickel, D. J., and Dyte, C. E. (1989). Family Dolichopodidae. In 'Catalog of Australasian and Oceanian Diptera'. (Ed. N. Evenhuis.) pp. 393-418. (Bishop Museum Press: Honolulu, HI, USA.)
18. Brooks, S. E. (2005). Systematics and phylogeny of Dolichopodinae (Diptera: Dolichopodidae). Zootaxa 857, 1-158.
19. Brooks, S. E., Cumming, J. M., and Pollet, M. A. A. (2005). 'Checklist of the Dolichopodidae s.str. (Diptera) of America north of Mexico.' 1st edn. Available online at: http://www.nadsdiptera.org/Doid/Checklist/Dolichopodidae Checklist.pdf [Verified 18 November 2005].
20. Buchmann, W. (1961). Die Genitalanhänge mitteleuropäischer Dolichopodiden. Zoologica, Stuttgart 39 (110), 1-50. [13 Tafeln].
21. Caterino, M. S., Cho, S., and Sperling, F. A. H. (2000). The current state of insect molecular systematics: a thriving Tower of Babel. Annual Review of Entomology 45, 1-54.
22. Cognato, A. I., and Sperling, F. A. H. (2000). Phylogeny of Ips DeGeer species (Coleoptera: Scolytidae) inferred from mitochondrial cytochrome oxidase I DNA sequence. Molecular Phylogenetics and Evolution 14, 445-460.
23. Cregan, M. B. (1941). Generic relationships of the Dolichopodidae (Diptera) based on a study of the mouth parts. Illinois Biological Monographs 18(1), 1-68.
24. Dyte, C. E. (1967). Some distinctions between the larvae and pupae of the Empididae and Dolichopodidae (Diptera). Proceedings of the Royal Entomological Society of London (A) 42(7-9), 119-128.
25. Dyte, C. E. (1975). Family Dolichopodidae. In 'A Catalogue of the Diptera of the Oriental Region. Vol. 2: Suborder Brachycera through Division Aschiza, Suborder Cyclorrhapha'. (Eds M. D. Delfinado and D. E. Hardy.) pp. 212-258. (University Press of Hawaii: Honolulu, HI, USA.)
26. Dyte, C. E., and Smith, K. G. V. (1980). 33. Family Dolichopodidae. In 'Catalogue of the Diptera of the Afrotropical Region'. (Ed. R. W. Crosskey.) pp. 443-463. (British Museum (Natural History): London, UK.)
27. Farris, J. S. (1989). The retention index and the rescaled consistency index. Cladistics 5, 417-419.
28. Farris, J. S., Källersjö, M., Kluge, A. G., and Bult, C. (1994). Testing significance of incongruence. Cladistics 10, 315-319.
29. Felsenstein, J. (1978). A likelihood approach to character weighting and what it tells us about parsimony and compatibility. Biological Journal of the Linnean Society 16, 183-196.
30. Foote, R. H., Coulson, J. R., and Robinson, H. (1965). Family Dolichopodidae. In 'Agriculture Handbook 276. A Catalogue of the Diptera of America North of Mexico'. (Eds A. Stone, C. W. Sabrosky, W. W. Wirth, R. H. Foote and J. R. Coulson.) pp. 482-530. (United States Department of Agriculture, Agricultural Research Service: Washington, DC, USA.)
31. Grootaert, P., and Meuffels, H. J. G. (1997). Dolichopodidae (Diptera) from Papua New Guinea XV. Scepastopyga gen. nov. and the establishment of a new subfamily, the Achalcinae. Journal of Natural History 31, 1587-1600.
32. Hebert, P. D. N., Cywinska, A., Ball, S. L., and de Waard, J. R. (2003a). Biological identifications through DNA barcodes. Proceedings of the Royal Society of London. Series B. Biological Sciences 270, 313-321.
33. Hebert, P. D. N., Ratnasingham, S., and de Waard, J. R. (2003b). Barcoding animal life: cytochrome c oxidase subunit 1 divergences among closely related species. Proceedings of the Royal Society of London. Series B. Biological Sciences 270, 96-99. Suppl.
34. Källersjö, M., Albert, V. A., and Farris, J. S. (1999). Homoplasy increases phylogenetic structure. Cladistics 15, 91-93.
35. Kertész, K. (1909). 'Catalogus dipterorum hucusque descriptorum. Volumen VI. Empididae, Dolichopodidae, Musidoridae.' (Museum Nationale Hungaricum Budapestini [=Budapest]: Hungary.)
36. Kluge, A. G., and Farris, J. S. (1969). Quantitative phyletics and the evolution of anurans. Systematic Zoology 18, 1-32.
37. Kumar, S., Tamura, K., Jakobsen, I. B., and Nei, M. (2001). MEGA2: Molecular Evolutionary Genetics Analysis software. (Arizona State University: Tempe, AZ, USA.)
38. Lambkin, C. L. (2004). Partitioned Bremer support localises significant conflict in bee flies (Diptera: Bombyliidae: Anthracinae). Invertebrate Systematics 18, 351-360.
39. Lioy, P. (1863-1864). I ditteri distribuiti secondo un nuovo metodo di classificazione naturale. Atti del Reale Istituto Veneto di Scienze, Lettere ed Arti (Ser. 3) 9, 187-236 (1863);
40. 499-518, 569-604, 719-771, 879-910, 989-1027, 1087-1126, 1311-1352 (1864);
41. 10, 59-84 (1864).
42. Lundbeck, W. (1912). 'Diptera Danica. Genera and species of flies hitherto found in Denmark. Part IV. Dolichopodidae.' (Gad: Copenhagen, Denmark.)
43. Lunt, D. H., Zhang, D.-X., Szymura, J. M., and Hewitt, G. M. (1996). The insect cytochrome oxidase I gene: evolutionary patterns and conserved primers for phylogenetic studies. Insect Molecular Biology 5, 153-165.
44. Martinez-Navarro, E. M., Galián, J., and Serrano, J. (2005). Phylogeny and molecular evolution of the tribe Harpalini (Coleoptera, Carabidae) inferred from mitochondrial cytochrome-oxidase I. Molecular Phylogenetics and Evolution 35, 127-146.
45. Masunaga, K. (1999). Phylogenetic relationships of marine-shore dolichopodid flies inferred from morphological data and DNA sequences. The Nature and Insects 34(2), 30-34. [in Japanese]
46. Negrobov, O. P. (1979). 29. Dolichopodidae. In 'Die Fliegen der Palaearktischen Region'. (Ed. E. Lindner.) 4(5), Lief. 322, 475-530.
47. Negrobov, O. P. (1986). On the system and phylogeny of flies of the fam. Dolichopodidae (Diptera). Entomologicheskoe Obozrenie 65(1), 182-186.
48. Negrobov, O. P. (1991). Family Dolichopodidae. In 'Catalogue of Palaearctic Diptera. Vol. 7. Dolichopodidae - Platypezidae'. (Eds A. Soos and L. Papp.) pp. 11-139. (Akadémiai Kiadó: Budapest, Hungary.)
49. Nuorteva, M. (1956). Über den Fichtenstamm-Bastkäfer, Hylurgops palliatus Gyll., und seine Insektenfeinde. Acta Entomologica Fennica 13, 7-116.
50. Parent, O. (1938). Diptères Dolichopodidae. Faune de France 35, 1-720.
51. Pollet, M. (2004a). Dolichopodidae. In 'Fauna Europaea: Diptera, Brachycera. Fauna Europaea version 1.1'. (Ed. T. Pape). Available online at: http://www.faunaeur.org [Verified16 December 2004].
52. Pollet, M. (2004b). A critical note on the systematic position of Gymnopternus (Diptera: Dolichopodidae). Studia dipterologica 10(2), 537-548.
53. Pollet, M., and Grootaert, P. (1996). An estimation of the natural value of dune habitats using Empidoidea (Diptera). Biodiversity and Conservation 5(7), 859-880.
54. Pollet, M. A. A., Brooks, S. E., and Cumming, J. M. (2004). Catalog of the Dolichopodidae (Diptera) of America north of Mexico. Bulletin of the American Museum of Natural History 283, 1-114.
55. Posada, D., and Crandall, K. A. (1998). Modeltest: testing the model of DNA substitution. Bioinformatics (Oxford, England) 14, 817-818.
56. Raes, J., and Van de Peer, Y. (1999). ForCon: a software tool for the conversion of sequence alignments. EMBnet.news 6(1). Available online at: http://www.es.embnet.org/EMBnet.Org/news/vol6_1/ForCon/forcon.html [Verified 25 September 2007].
57. Robinson, H. (1970). The subfamilies of the family Dolichopodidae in North and South America (Diptera). Papéis Avulsos do Departamento de Zoologia. Universidade de São Paulo 23(6), 53-62.
58. Ronquist, F., and Huelsenbeck, J. P. (2003). MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics (Oxford, England) 19, 1572-1574.
59. Schiner, J. R. (1864). 'Catalogus systematicus Dipterorum Europae.' (Societatis zoologico-botanicae: Vindobonae [=Vienna], Austria.)
60. Simon, C., Frati, F., Beckenbach, A., Crespi, B., Liu, H., and Flook, P. (1994). Evolution, Weighting, and Phylogenetic Utility of Mitochondrial Gene Sequences and a Compilation of Conserved Polymerase Chain Reaction Primers. Annals of the Entomological Society of America 87, 651-701.
61. Sorenson, M. D. (1999). TreeRot, Version 2. Computer software and documentation. (Boston University: Boston, MA, USA.)
62. Swofford, D. L. (2002). 'PAUP*: Phylogenetic Analysis Using Parsimony (*and other methods), version 4.0 b10.' (Sinauer Associates: Sunderland, MA, USA.)
63. Swofford, D. L., Olsen, G. L., Waddel, P. J., and Hillis, D. M. (1996). Phylogenetic inference. In 'Molecular systematics'. 2nd edn. (Eds D. M. Hillis, C. Morowitz, and B. K. Mable.) pp. 407-514. (Sinauer: Sunderland, MA, USA.)
64. Tamura, K., and Nei, M. (1993). Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzees. Molecular Biology and Evolution 10, 512-526.
65. Ulrich, H. (1981). Zur systematischen Gliederung der Dolichopodiden (Diptera). Bonner Zoologische Beitrage 31(3-4), 385-402.
66. Wermelinger, B. (2002). Development and distribution of predators and parasitoids during two consecutive years of an Ips typographus (Col., Scolytidae) infestation. Journal of Applied Entomology 126, 521-527.
67. Xia, X., and Xie, Z. (2001). DAMBE: Data analysis in molecular biology and evolution. The Journal of Heredity 92, 371-373.
68. Zhang, D.-X., and Hewitt, G. M. (1997). Assessment of the universality and utility of a set of conserved mitochondrial COI primers in insects. Insect Molecular Biology 6, 143-150.
69. Zhang, L., and Yang, D. (2005). A study on the phylogeny of Dolichopodinae from the Palaearctic and Oriental realms, with descriptions of three new genera (Diptera, Dolichopodidae). Acta Zootaxonomica Sinica 30(1), 180-190.