Insertion sequence elements as mediators of strain diversity in Lactobacillus helveticus

International Journal of Food Microbiology

Volumn 120, Issue 1-2, 2007, Pages 120-123

  Callanan, M J ^a   Ross, R P ^a,b   Beresford, T P ^a  

^a TEAGASC FOOD RESEARCH CENTRE   (Ireland)

^b UNIVERSITY COLLEGE CORK   (Ireland)

Author keywords

Distribution; IS element; Lactobacillus helveticus

Indexed keywords

ARTICLE; BACTERIAL STRAIN; GENE INSERTION; GENE LOCUS; LACTOBACILLUS HELVETICUS; MICROBIAL DIVERSITY; NONHUMAN; PHYLOGENETIC TREE; POLYMERASE CHAIN REACTION; RANDOM AMPLIFIED POLYMORPHIC DNA; STRAIN DIFFERENCE;

BASE SEQUENCE; CHEESE; CLUSTER ANALYSIS; CONSERVED SEQUENCE; DNA TRANSPOSABLE ELEMENTS; DNA, BACTERIAL; GENE AMPLIFICATION; GENES, BACTERIAL; GENOME, BACTERIAL; LACTOBACILLUS HELVETICUS; MOLECULAR SEQUENCE DATA; RANDOM AMPLIFIED POLYMORPHIC DNA TECHNIQUE; SENSITIVITY AND SPECIFICITY; SEQUENCE ANALYSIS, DNA; SPECIES SPECIFICITY;

LACTOBACILLUS HELVETICUS;

EID: 35748961711     PISSN: 01681605     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.ijfoodmicro.2007.06.014     Document Type: Article

References (18)

1. Altermann E., and Klaenhammer T.R. GAMOLA: a new local solution for sequence annotation and analyzing draft and finished prokaryotic genomes. Omics 7 (2003) 161-169
2. Altermann E., Russell W.M., Azcarate-Peril M.A., Barrangou R., Buck B.L., McAuliffe O., Souther N., Dobson A., Duong T., Callanan M., Lick S., Hamrick A., Cano R., and Klaenhammer T.R. Complete genome sequence of the probiotic lactic acid bacterium Lactobacillus acidophilus NCFM. Proc. Natl. Acad. Sci. U. S. A. 102 (2005) 3906-3912
3. Altschul S.F., Madden T.L., Schaffer A.A., Zhang J., Zhang Z., Miller W., and Lipman D.J. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res. 25 (1997) 3389-3402
4. Arnau J., Jorgensen F., Madsen S.M., Vrang A., and Israelsen H. Cloning of the Lactococcus lactis adhE gene, encoding a multifunctional alcohol dehydrogenase, by complementation of a fermentative mutant of Escherichia coli. J. Bacteriol. 180 (1998) 3049-3055
5. Callanan M.J., Beresford T.P., and Ross R.P. Genetic diversity in the lactose operons of Lactobacillus helveticus strains and its relationship to the role of these strains as commercial starter cultures. Appl. Environ. Microbiol. 71 (2005) 1655-1658
6. Claesson M.J., Li Y., Leahy S., Canchaya C., van Pijkeren J.P., Cerdeno-Tarraga A.M., Parkhill J., Flynn S., O'Sullivan G.C., Collins J.K., Higgins D., Shanahan F., Fitzgerald G.F., van Sinderen D., and O'Toole P.W. Multireplicon genome architecture of Lactobacillus salivarius. Proc. Natl. Acad. Sci. U. S. A. 103 (2006) 6718-6723
7. Fox P.F., and Wallace J.M. Formation of flavor compounds in cheese. Adv. Appl. Microbiol. 45 (1997) 17-85
8. Hannon J.A., Wilkinson M.G., Delahunty C.M., Wallace J.M., Morrissey P.A., and Beresford T.P. Use of autolytic starter systems to accelerate the ripening of Cheddar cheese. Int. Dairy J. 13 (2003) 313-323
9. Hugenholtz J., Kleerebezem M., Starrenburg M., Delcour J., de Vos W., and Hols P. Lactococcus lactis as a cell factory for high-level diacetyl production. Appl. Environ. Microbiol. 66 (2000) 4112-4114
10. Kenny O.M., Fitzgerald R.J., O'Cuinn G., Beresford T.P., and Jordan K.N. Comparative analysis of the autolytic potential of Lactobacillus helveticus strains during Cheddar cheese ripening. Int. J. Dairy Technol. 58 (2005) 207-213
11. Kiernan R.C., Beresford T.P., O'Cuinn G., and Jordan K.N. Autolysis of lactobacilli during Cheddar cheese ripening. Ir. J. Agric. Food Res. 39 (2000) 95-106
12. Mahillon J., and Chandler M. Insertion sequences. Microbiol. Mol. Biol. Rev. 62 (1998) 725-774
13. Pridmore R.D., Berger B., Desiere F., Vilanova D., Barretto C., Pittet A.C., Zwahlen M.C., Rouvet M., Altermann E., Barrangou R., Mollet B., Mercenier A., Klaenhammer T., Arigoni F., and Schell M.A. The genome sequence of the probiotic intestinal bacterium Lactobacillus johnsonii NCC 533. Proc. Natl. Acad. Sci. U. S. A. 101 (2004) 2512-2517
14. Ricci G., and Fortina M.G. Characterization of Lactobacillus helveticus strains isolated from cheeses by distribution studies of insertion sequences. Int. J. Food Microbiol. 112 (2006) 112-119
15. Schneider D., and Lenski R.E. Dynamics of insertion sequence elements during experimental evolution of bacteria. Res. Microbiol. 155 (2004) 319-327
16. Tailliez P., Ehrlich S.D., and Chopin M.C. Characterization of IS1201, an insertion sequence isolated from Lactobacillus helveticus. Gene 145 (1994) 75-79
17. Torino M.I., Taranto M.P., and Font de Valdez G. Citrate catabolism and production of acetate and succinate by Lactobacillus helveticus ATCC 15807. Appl. Microbiol. Biotechnol. 69 (2005) 79-85
18. Zwahlen M.C., and Mollet B. ISL2, a new mobile genetic element in Lactobacillus helveticus. Mol. Gen. Genet. 245 (1994) 334-338