A serial lectin approach to the mucin-type O-glycoproteome of Drosophila melanogaster S2 cells

Proteomics

Volumn 7, Issue 18, 2007, Pages 3264-3277

  Schwientek, Tilo ^a   Mandel, Ulla ^b   Roth, Udo ^a   Müller, Stefan ^a   Hanisch, Franz Georg ^a  

^a UNIVERSITY OF COLOGNE   (Germany)

^b UNIVERSITY OF COPENHAGEN   (Denmark)

Author keywords

Drosophila; Glycoproteome; O glycosylation

Indexed keywords

GLUTACTIN; GLYCOPROTEIN 93; HEAT SHOCK PROTEIN; INTERSTITIAL COLLAGENASE; LAMININ GAMMA1; LECTIN; MUCIN; ORTHO GLYCOPROTEOME; PEROXIDASIN; PROTEOME; SCLEROPROTEIN; SERINE PROTEINASE INHIBITOR; TN ANTIGEN; TRYPTASE; UNCLASSIFIED DRUG;

ANIMAL CELL; ARTICLE; CELL GROWTH; CONTROLLED STUDY; DROSOPHILA MELANOGASTER; EXTRACELLULAR MATRIX; GLYCOSYLATION; MATRIX ASSISTED LASER DESORPTION IONIZATION TIME OF FLIGHT MASS SPECTROMETRY; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN EXPRESSION; PROTEIN FUNCTION; PROTEIN ISOLATION; PROTEOMICS; TANDEM REPEAT;

AMINO ACID SEQUENCE; ANIMALS; CARBOHYDRATES; CHROMATOGRAPHY, AFFINITY; DROSOPHILA MELANOGASTER; ELECTROPHORESIS, GEL, TWO-DIMENSIONAL; GAS CHROMATOGRAPHY-MASS SPECTROMETRY; GLYCOSYLATION; LECTINS; MOLECULAR SEQUENCE DATA; MUCINS; PROTEOME;

DROSOPHILA MELANOGASTER; EUKARYOTA;

EID: 34948818346     PISSN: 16159853     EISSN: 16159861     Source Type: Journal    
DOI: 10.1002/pmic.200600793     Document Type: Article

References (76)

1. Gagneux, P., Varki, A., Glycobiology 1999, 9, 747-755.
2. Varki, A., in: Varki, A., Cummings, R., Esko, J., Freeze, H., Hart, G., Marth, J. (Eds.), Essentials of Glycobiology, Cold Spring Harbor Laboratory Press, Woodbury 1999, pp. 57-68.
3. Dell, A., Morris, H. R., Science 2001, 291, 2351-2356.
4. Yan, A., Lennarz, W. J., J. Biol. Chem. 2005, 280, 3121-3124.
5. Hanisch, F. G., Biol. Chem. 2001, 382, 143-149.
6. Ten Hagen, K. G., Fritz, T. A., Tabak, L. A., Glycobiology 2003, 13, 1R-16R.
7. Schwientek, T., Bennett, E. P., Flores, C., Thacker, J. et al., J. Biol. Chem. 2002, 277, 22623-22638.
8. Wandall, H. H., Hassan, H., Mirgorodskaya, E., Kristensen, A. K. et al., J. Biol. Chem. 1997, 272, 23503-23514.
9. Hansen, J. E., Lund, O., Tolstrup, N., Gooley, A. A. et al., Glycoconj. J. 1998, 15, 115-130.
10. Geng, M., Zhang, X., Bina, M., Regnier, F., J. Chromatogr. B 2001, 752, 293-306.
11. Kaji, H., Saito, H., Yamauchi, Y., Shinkawa, T. et al., Nat. Bio technol. 2003, 21, 667-672.
12. Madera, M., Mechref, Y., Novotny, M. V., Anal. Chem. 2005, 77, 4081-4090.
13. Zhang, H., Li, X. J., Martin, D. B., Aebersold, R., Nat. Biotechnol. 2003, 21, 660-666.
14. Tarentino, A. L., Plummer, T. H., Methods Enzymol. 1994, 230, 44-57.
15. Xiong, L., Regnier, F. E., J. Chromatogr. B 2002, 782, 405-418.
16. Hanisch, F. G., Müller, S., in: Walker, J. M. (Ed.), The Proteomics Protocols Handbook, Humana Press, Totawa 2005, pp. 439-457.
17. Hang, H. C., Yu, C., Kato, D. L., Bertozzi, C. R. Proc. Natl. Acad. Sci. USA 2003, 100, 14846-14851.
18. Agard, N. J., Baskin, J. M., Prescher, J. A., Lo, A., Bertozzi, C. R., ACS Chem. Biol. 2006, 1, 644-648.
19. Sharon, N., Lis, H., Glycobiology 2004, 14, 53R-62R.
20. Kramerov, A. A., Arbatsky, N. P., Rozovsky, Y. M., Mikhaleva, E. A. et al., FEBS Lett. 1996, 378, 213-218.
21. Seppo, A., Tiemeyer, M., Glycobiology 2000, 10, 751-760.
22. North, S. J., Koles, K., Hembd, C., Morris, E. et al., Glycoconj. J. 2006, 23, 345-354.
23. Lopez, M., Tetaert, D., Juliant, S., Gazon, M. et al., Biochim. Biophys. Acta 1999, 1427, 49-61.
24. Müller, S., Hanisch, F. G., J. Biol. Chem. 2002, 277, 26103-26112.
25. Roth, G. E., Wattier, S., Bomschein, H., Lehmann, M., Korge, G., Genetics 1999, 153, 753-762.
26. Engelmann, K., Kinlough, C. L., Müller, S., Razawi, H. et al., Glycobiology 2005, 15, 1111-1124.
27. Hanisch, F. G., Peter-Katalinic, J., Eur. J. Biochem. 1992, 205, 527-535.
28. Wessel, D., Flügge, U. I., Anal. Biochem. 1984, 138, 141-143.
29. Ciucanu, I., Kerek, F., J. Chromatogr. 1984, 284, 179-185.
30. Görg, A., Weiss, W., Dunn, M. J. Proteomics 2004, 4, 3665-3685.
31. Clausen, H., Stroud, M., Parker, J., Springer, G., Hakomori, S., Mol. Immunol. 1988, 25, 199-204.
32. Hirohashi, S., Clausen, H., Yamada, T., Shimosato, Y., Hakomori, S., Proc. Natl. Acad. Sci. USA 1985, 82, 7039-7043.
33. Packer, N. H., Ball, M. S., Devine, P. L., Methods Mol. Biol. 1999, 112, 341-352.
34. Morelle, W., Canis, K., Chirat, F., Faid, V., Michalsky, J.-C., Proteomics 2006, 6, 3993-4015.
35. Hirabayashi, J., Hayama, K., Kaji, H., Isobe, T., Kasai, K., J. Biochem. (Tokyo) 2002, 132, 103-114.
36. Yang, Z., Hancock, W. S., J. Chromatogr. A 2004, 1053, 79-88.
37. Yang, Z., Hancock, W. S., Chew, T. R., Bonilla, L., Proteomics 2005, 5, 3353-3366.
38. Durham, M., Regnier, F. E., J. Chromatogr. A 2006, 1132, 165-173.
39. Theopold, U., Samakovlis, C., Erdjument-Bromage, H., Dillon, N. et al., J. Biol. Chem. 1996, 271, 12708-12715.
40. Theopold, U., Dorian, C., Schmidt, O., Insect Biochem. Mol. Biol. 2001, 31, 189-197.
41. Meister, M., Lagueux, M., Cell. Microbiol. 2003, 5, 573-580.
42. Boutros, M., Agaisse, H., Perrimon, N., Dev. Cell 2002, 3, 711-722.
43. Levy, F., Bulet, P., Ehret-Sabatier, L. E., Mol. Cell. Proteomics 2004, 3, 156-166.
44. Fessier, L. I., Nelson, R. E., Fessler, J. H., Methods Enzymol. 1994, 245, 271-294.
45. Karlsson, C., Korayem, A. M., Scherfer, C., Loseva, O. et al., J. Biol. Chem. 2004, 279, 52033-52041.
46. Callaerts, P., Vulsteke, V., De Loof, A., Peumans, W., Rouxs Arch. Dev. Biol. 1995, 204, 229-243.
47. Nelson, R. E., Fessier, L. I., Takagi, Y., Blumberg, B. et al., EMBO J. 1994, 13, 3438-3447.
48. Olson, P. F., Fessier, L. I., Nelson, R. E., Sterne, R. E. et al., EMBO J. 1990, 9, 1219-1227.
49. Julenius, K., Mølgaard, A., Gupta, R., Brunak, S., Glycobiology 2005, 15, 153-164.
50. Page-McCaw, A., Serano, J., Santé, J. M., Rubin, G. M., Dev. Cell 2003, 4, 95-106.
51. Vierstrate, E., Verleyen, P., Baggerman, G., D'Hertog, W. et al., Proc. Natl. Acad. Sci. USA 2004, 101, 470-475.
52. De Morais Guedes, S., Vitorino, R., Domingues, R., Tomer, K. et al., Biochem. Biophys. Res. Commun. 2005, 328, 106-115.
53. Wu, Y. I., Munshi, H. G., Sen, R., Snipas, S. J. et al., J. Biol. Chem. 2004, 279, 8278-8289.
54. Remade, A. G., Chekanov, A. V., Golubkov, V. S., Savinov, A. Y. et al., J. Biol. Chem. 2006, 281, 16897-16905.
55. Hu, S., Sonnenfeld, M., Stahl, S., Crews, S. T. J. Neurobiol. 1998, 35, 77-93.
56. Kim, Y.-S., Ryu, J.-H., Han, S.-J., Cho, K.-H. et al., J. Biol. Chem. 2000, 275, 32721-32727.
57. Gobert, V., Gottar, M., Matskevich, A. A., Rutschmann, S. et al., Science 2003, 302, 2126-2130.
58. Pili-Floury, S., Leulier, F., Takahashi, K., Saigo, K. et al., J. Biol. Chem. 2004, 279, 12848-12853.
59. Ross, J., Jiang, H., Kanost, M. R., Wang, Y., Gene 2003, 304, 117-131.
60. Castillejo-Lopez, C., Häcker, U., Biochem. Biophys. Res. Commun. 2005, 338, 1075-1082.
61. Bonin, C. P., Mann, R. S., Genetics 2004, 167, 1801-1811.
62. Jiang, H., Kanost, M. R., Insect Biochem. Mol. Biol. 2000, 30, 95-105.
63. De Gregorio, E., Spellman, P. T., Rubin, G. M., Lemaitre, B., Proc. Natl. Acad. Sci. USA 2001, 98, 12590-12595.
64. Söderhall, K., Cerenius, L., Curr. Opin. Immunol. 1998, 10, 23-28.
65. Guzdek, A., Potempa, J., Dubin, A., Travis, J., FEBS Lett. 1990, 272, 125-127.
66. Reichhart, J.-M., Trends Cell Biol. 2005, 15, 659-665.
67. Hashimoto, C., Kim, D. R., Weiss, L. A., Miller, J. W., Morisato, D., Dev. Cell 2003, 5, 945-950.
68. Ligoxygakis, P., Pelte, N., Hoffmann, J. A., Reichhart, J.-M., Science 2002, 297, 114-116.
69. Ligoxygakis, P., Pelte, N., Ji, C., Leclerc, V. et al., EMBO J. 2002, 21, 6330-6337.
70. De Gregorio, E., Han, S.-J., Lee, W., Baek, M.-J. et al., Dev. Cell 2002, 3, 581-592.
71. Kocks, C., Maehr, R., Overklee, H. S., Wang, E. W. et al., Mol. Cell. Proteomics 2003, 2, 1188-1197.
72. Galewsky, S., Hieronymus, S., Kraus, J., A. Dros. Res. Conf. 2003, 44, 256A.
73. Otte, S., Barnikol-Watanabe, S., Vorbrüggen, G., Hilschmann, N., Mech. Dev. 1999, 86, 155-158.
74. Kawano, J.-I., Kotani, T., Ogata, Y., Ohtaki, S. et al., Eur. J. Cell Biol. 2000, 79, 208-217.
75. Lin, P., Le-Niculescu, H., Hofmeister, R., McCaffery, M., et al., J. Cell Biol. 1998, 141, 1515-1527.
76. Lavoie, C., Meerloo, T., Lin, P., Farquhar, M. G., Mol. Endocrinol. 2002, 16, 2462-2474.