메뉴 건너뛰기




Volumn 50, Issue 5, 2007, Pages 706-716

Structural parameterization and functional prediction of antigenic polypeptome sequences with biological activity through quantitative sequence-activity models (QSAM) by molecular electronegativity edge-distance vector (VMED)

Author keywords

Antigenic polypeptide (AGPP) sequences; Bioactive oligopeptide (BAOP) chains; Molecular electronegativity distance edge vector (VMED); Quantitative sequence activity models (QSAM); Theoretically computational descriptors (TCD)

Indexed keywords

AMINO ACID; ANTIGEN; EPITOPE; OLIGOPEPTIDE; PEPTIDE;

EID: 34648830010     PISSN: 10069305     EISSN: 18622798     Source Type: Journal    
DOI: 10.1007/s11427-007-0080-7     Document Type: Review
Times cited : (6)

References (68)
  • 1
    • 0023055106 scopus 로고
    • Human genome - Development of energy on the map
    • Placa J. Human genome-Development of energy on the map. Nature 1986, 321, 371-386
    • (1986) Nature , vol.321 , pp. 371-386
    • Placa, J.1
  • 2
    • 0029955205 scopus 로고    scopus 로고
    • A new strategy for genome sequencing
    • Venter J C, Smith H O, Hood L. A new strategy for genome sequencing. Nature 1996, 381, 364-366
    • (1996) Nature , vol.381 , pp. 364-366
    • Venter, J.C.1    Smith, H.O.2    Hood, L.3
  • 3
    • 2042437650 scopus 로고    scopus 로고
    • Initial sequencing and analysis of the human genome
    • International Human Genome Sequencing Consortium.
    • International Human Genome Sequencing Consortium. Initial sequencing and analysis of the human genome. Nature, 2001, 409:860-921
    • (2001) Nature , vol.409 , pp. 860-921
  • 6
    • 0027532458 scopus 로고
    • Chemical pattern recognition and multivariate analysis for QSAR studies
    • doi: 10.1016/0165-9936(93)87051-X
    • Miyashita Y, Li Z, Sasaki S. Chemical pattern recognition and multivariate analysis for QSAR studies. Trend Anal Chem TrAc, 1993, 12: 50-60, doi: 10.1016/0165-9936(93)87051-X
    • (1993) Trend Anal Chem TrAc , vol.12 , pp. 50-60
    • Miyashita, Y.1    Li, Z.2    Sasaki, S.3
  • 7
    • 0028402687 scopus 로고
    • Assessing the accuracy of protein secondary structure
    • Wang Z X. Assessing the accuracy of protein secondary structure. Nat Struct Biol, 1994, 1: 145-146
    • (1994) Nat Struct Biol , vol.1 , pp. 145-146
    • Wang, Z.X.1
  • 8
    • 0029857657 scopus 로고    scopus 로고
    • How many fold types of protein are there in nature?
    • Wang Z X. How many fold types of protein are there in nature? Proteins: Structure, Function and Genetics, 1996, 26: 186-191
    • (1996) Proteins: Structure, Function and Genetics , vol.26 , pp. 186-191
    • Wang, Z.X.1
  • 9
    • 0033179440 scopus 로고    scopus 로고
    • Influence of substrates on in vitro dephosphorylation of glycogen phosphorylase a by protein phosphatase-1
    • Wang Z X. Influence of substrates on in vitro dephosphorylation of glycogen phosphorylase a by protein phosphatase-1. Biochem J, 1999, 341: 545-554
    • (1999) Biochem J , vol.341 , pp. 545-554
    • Wang, Z.X.1
  • 11
    • 0037115758 scopus 로고    scopus 로고
    • Autophosphorylation kinetics of protein kinases
    • Wang Z X, Wu J W. Autophosphorylation kinetics of protein kinases. Biochem J, 2002, 368: 947-952
    • (2002) Biochem J , vol.368 , pp. 947-952
    • Wang, Z.X.1    Wu, J.W.2
  • 12
    • 0346037279 scopus 로고    scopus 로고
    • Evaluation of the catalytic mechanism of the p21-activated protein kinase PAK2
    • Wu H, Zheng Y, Wang Z X. Evaluation of the catalytic mechanism of the p21-activated protein kinase PAK2. Biochemistry, 2003, 42:1129-1139
    • (2003) Biochemistry , vol.42 , pp. 1129-1139
    • Wu, H.1    Zheng, Y.2    Wang, Z.X.3
  • 13
    • 0142211300 scopus 로고    scopus 로고
    • The mechanism of p21-activated protein kinase 2 autoactivation
    • Wu H, Wang Z X. The mechanism of p21-activated protein kinase 2 autoactivation. J Biol Chem, 2003, 278: 41768-41778
    • (2003) J Biol Chem , vol.278 , pp. 41768-41778
    • Wu, H.1    Wang, Z.X.2
  • 15
    • 0027222893 scopus 로고
    • Defining topological equivalents in protein structures by means of dynamic programming algorithm
    • Luo Y, Lai L H, Xu X J. Defining topological equivalents in protein structures by means of dynamic programming algorithm. Protein Eng, 1993, 6: 373
    • (1993) Protein Eng , vol.6 , pp. 373
    • Luo, Y.1    Lai, L.H.2    Xu, X.J.3
  • 16
    • 0027514701 scopus 로고
    • Phyletic relationship of proteins based on structure preference factors
    • Qu C X, Lai L H, Xu X J. Phyletic relationship of proteins based on structure preference factors. J Mol Evol, 1993, 36: 67
    • (1993) J Mol Evol , vol.36 , pp. 67
    • Qu, C.X.1    Lai, L.H.2    Xu, X.J.3
  • 17
    • 0012374783 scopus 로고    scopus 로고
    • Molecular recognition: Monomer of the yeast transcriptional activator GCN4 recognizes its dimer DNA binding target sites specifically
    • 5
    • Cao W, Liu L, Lai L H, et al. Molecular recognition: monomer of the yeast transcriptional activator GCN4 recognizes its dimer DNA binding target sites specifically. Sci China Ser B-Chem Sci, 2000, 43(5): 466-476
    • (2000) Sci China Ser B-Chem Sci , vol.43 , pp. 466-476
    • Cao, W.1    Liu, L.2    Lai, L.H.3
  • 18
    • 4444271581 scopus 로고    scopus 로고
    • Identification of binding epitope of a monoclonal antibody (Z12) against human TNF-α using computer modeling and deletion mutant technique
    • 3
    • Zhang W, Feng J N, Shen B F. Identification of binding epitope of a monoclonal antibody (Z12) against human TNF-α using computer modeling and deletion mutant technique. Sci China Ser C-Life Sci, 2004, 47(3): 279-286
    • (2004) Sci China Ser C-Life Sci , vol.47 , pp. 279-286
    • Zhang, W.1    Feng, J.N.2    Shen, B.F.3
  • 19
    • 34648851508 scopus 로고    scopus 로고
    • Epitope prediction based on three-dimensional structure
    • 2
    • Feng J N, Wan T, Wu J J, et al. Epitope prediction based on three-dimensional structure. J Mol Sci, 1999, 15(2): 112-115
    • (1999) J Mol Sci , vol.15 , pp. 112-115
    • Feng, J.N.1    Wan, T.2    Wu, J.J.3
  • 20
    • 34648849309 scopus 로고    scopus 로고
    • The multi-parameter prediction of protein antigenic determinants
    • 6
    • Wan T, Sun T, Wu J J, et al. The multi-parameter prediction of protein antigenic determinants. Chin J Immunol, 1997, 13(6): 329-333
    • (1997) Chin J Immunol , vol.13 , pp. 329-333
    • Wan, T.1    Sun, T.2    Wu, J.J.3
  • 21
    • 67349189383 scopus 로고
    • The kinetics of formation of native ribonuclease during oxidation of the reduced polypeptide chain
    • Anfinsen C B, Haber E, Sela M, et al. The kinetics of formation of native ribonuclease during oxidation of the reduced polypeptide chain. Proc Natl Acad Sci USA, 1961, 47: 1309
    • (1961) Proc Natl Acad Sci USA , vol.47 , pp. 1309
    • Anfinsen, C.B.1    Haber, E.2    Sela, M.3
  • 22
    • 0027427326 scopus 로고
    • The reaction cycle of GroEL and GroES in chaperonin-assisted protein folding
    • Martin J, Mayhew M, Lattger T, et al. The reaction cycle of GroEL and GroES in chaperonin-assisted protein folding. Nature, 1993, 366:228
    • (1993) Nature , vol.366 , pp. 228
    • Martin, J.1    Mayhew, M.2    Lattger, T.3
  • 23
    • 0013965569 scopus 로고
    • Relations between chemical structure and biological activity in peptides
    • Sneath P H A. Relations between chemical structure and biological activity in peptides. J Theor Biol, 1966, 12: 157-195
    • (1966) J Theor Biol , vol.12 , pp. 157-195
    • Sneath, P.H.A.1
  • 24
    • 0021026854 scopus 로고
    • Opioid peptides. Pharmacological activity and lipophilic character of dermorphin oligopeptides
    • Borea P A, Santo G P, Salvadori S, et al. Opioid peptides. Pharmacological activity and lipophilic character of dermorphin oligopeptides. Farmaco Ed Sci, 1983, 38: 521-526
    • (1983) Farmaco Ed Sci , vol.38 , pp. 521-526
    • Borea, P.A.1    Santo, G.P.2    Salvadori, S.3
  • 25
    • 0023428914 scopus 로고
    • Quantitative structure-activity relationships of the bitter thresholds of amino acids, peptides, and their derivatives
    • Asao M, Iwamura H, Akamatsu M, et al. Quantitative structure-activity relationships of the bitter thresholds of amino acids, peptides, and their derivatives. J Med Chem, 1987, 30: 1873-1879
    • (1987) J Med Chem , vol.30 , pp. 1873-1879
    • Asao, M.1    Iwamura, H.2    Akamatsu, M.3
  • 26
    • 0023731964 scopus 로고
    • Amino acid side chain parameters for correlation studies in biology and pharmacology
    • Fauchere J, Charton M, Kier L B, et al. Amino acid side chain parameters for correlation studies in biology and pharmacology. Int J Pept Protein Res, 1988, 32: 269-278
    • (1988) Int J Pept Protein Res , vol.32 , pp. 269-278
    • Fauchere, J.1    Charton, M.2    Kier, L.B.3
  • 27
    • 0027183015 scopus 로고
    • 3D-QSAR of angiotensin-converting enzyme and thermolysin inhibitors: A comparison of CoMFA models based on deduced and experimentally determined active site geometries
    • Depriest S A, Mayer D, Naylor C D, et al. 3D-QSAR of angiotensin- converting enzyme and thermolysin inhibitors: A comparison of CoMFA models based on deduced and experimentally determined active site geometries. J Am Chem Soc, 1993, 115: 5372-5384
    • (1993) J Am Chem Soc , vol.115 , pp. 5372-5384
    • Depriest, S.A.1    Mayer, D.2    Naylor, C.D.3
  • 28
    • 0027232379 scopus 로고
    • Amino acids characterization by GRID and multivariate data analysis
    • Cocchi M, Johansson E. Amino acids characterization by GRID and multivariate data analysis. Quant Struct Act Relat, 1993, 12: 1-8
    • (1993) Quant Struct Act Relat , vol.12 , pp. 1-8
    • Cocchi, M.1    Johansson, E.2
  • 29
    • 85050903060 scopus 로고
    • The quantitative description of amino acid, peptide, and protein properties and bioactivities
    • Charton M. The quantitative description of amino acid, peptide, and protein properties and bioactivities. Prop Phys Org Chem, 1990, 18:163-284
    • (1990) Prop Phys Org Chem , vol.18 , pp. 163-284
    • Charton, M.1
  • 30
    • 0021931978 scopus 로고
    • A statistical analysis of the physical properties of the 20 naturally occurring amino acids
    • Kidera A, Konishi Y, Oka M, et al. A statistical analysis of the physical properties of the 20 naturally occurring amino acids. J Protein Chem, 1985, 4: 23-55
    • (1985) J Protein Chem , vol.4 , pp. 23-55
    • Kidera, A.1    Konishi, Y.2    Oka, M.3
  • 31
    • 0023192524 scopus 로고
    • Peptide quantitative structure-activity relationships, a multivariate approach
    • Hellberg S, Sjostrom M, Skagerberg B, et al. Peptide quantitative structure-activity relationships, A multivariate approach. J Med Chem, 1987, 30: 1126-1135
    • (1987) J Med Chem , vol.30 , pp. 1126-1135
    • Hellberg, S.1    Sjostrom, M.2    Skagerberg, B.3
  • 32
    • 0025811052 scopus 로고
    • Minimum analogue peptide sets (MAPS) for quantitative structure-activity relationships
    • Hellberg S, Eriksson L, Jonsson J, et al. Minimum analogue peptide sets (MAPS) for quantitative structure-activity relationships. Int J Pept Protein Res, 1991, 37: 414-424
    • (1991) Int J Pept Protein Res , vol.37 , pp. 414-424
    • Hellberg, S.1    Eriksson, L.2    Jonsson, J.3
  • 33
    • 0023232669 scopus 로고
    • Principal property values for six non-natural amino acids and their application to a structure-activity relationship for oxytocin peptide analogues
    • Wold S, Eriksson L, Hellberg S, et al. Principal property values for six non-natural amino acids and their application to a structure-activity relationship for oxytocin peptide analogues. Can J Chem, 1987, 65:1814-1820
    • (1987) Can J Chem , vol.65 , pp. 1814-1820
    • Wold, S.1    Eriksson, L.2    Hellberg, S.3
  • 34
    • 0029031962 scopus 로고
    • Amino acid side chain descriptors for quantitative structure activity relationship studies of peptide analogues
    • Collantes E R, Dunn W J. Amino acid side chain descriptors for quantitative structure activity relationship studies of peptide analogues. J Med Chem, 1995, 38: 2705-2713
    • (1995) J Med Chem , vol.38 , pp. 2705-2713
    • Collantes, E.R.1    Dunn, W.J.2
  • 35
    • 0000610485 scopus 로고    scopus 로고
    • MS-WHIM scores for amino acids: A new 3D-description for peptide QSAR and QSPR studies
    • Zaliani A, Gancia E. MS-WHIM scores for amino acids: A new 3D-description for peptide QSAR and QSPR studies. J Chem Inf Compt Sci, 1999, 39: 525-533
    • (1999) J Chem Inf Compt Sci , vol.39 , pp. 525-533
    • Zaliani, A.1    Gancia, E.2
  • 36
    • 0033087210 scopus 로고    scopus 로고
    • Topological shape and size of peptides: Identification of potential allele specific helper T cell antigenic sites
    • Raychaudhury C, Banerjee A, Bag P, et al. Topological shape and size of peptides: Identification of potential allele specific helper T cell antigenic sites. J Chem Inf Comput Sci, 1999, 39: 248-254
    • (1999) J Chem Inf Comput Sci , vol.39 , pp. 248-254
    • Raychaudhury, C.1    Banerjee, A.2    Bag, P.3
  • 37
    • 11744325593 scopus 로고    scopus 로고
    • Approach to estimation and prediction for normal boiling points of alkanes based on a molecular distance-edge vector(MDE), lambt
    • 3
    • Liu S S, Cai C Z, Li Z. Approach to estimation and prediction for normal boiling points of alkanes based on a molecular distance-edge vector(MDE), lambt. J Chem Inf Comput Sci, 1998, 38(3): 387-394, doi: 10.1021/ci970109z
    • (1998) J Chem Inf Comput Sci , vol.38 , pp. 387-394
    • Liu, S.S.1    Cai, C.Z.2    Li, Z.3
  • 38
    • 0042408008 scopus 로고    scopus 로고
    • A novel molecular electronegativity-distance vector(MEDV)
    • 11
    • Liu S S, Cai S X, Liu Y, et al. A novel molecular electronegativity- distance vector(MEDV). Acta Chim Sin (in Chinese), 2000, 58(11):1353-1357
    • (2000) Acta Chim Sin (In Chinese) , vol.58 , pp. 1353-1357
    • Liu, S.S.1    Cai, S.X.2    Liu, Y.3
  • 40
    • 34648838044 scopus 로고    scopus 로고
    • Novel molecular electronegativity-distance vector for organic characterization and application
    • Higher Education Press Beijing
    • Liu S S. Novel molecular electronegativity-distance vector for organic characterization and application. Selected 100 Excellent PhD Dissertations (in Chinese). Beijing: Higher Education Press, 2005. 07, Ch1-12: 228+17
    • (2005) Selected 100 Excellent PhD Dissertations (In Chinese)
    • Liu, S.S.1
  • 42
    • 0041870567 scopus 로고    scopus 로고
    • Structural parameterization and QSAR study of oligopeptides
    • 7
    • Ling Z H, Liu S S, Li Z. Structural parameterization and QSAR study of oligopeptides. Acta Chim Sin (in Chinese), 2001, 59(7): 1004-1008
    • (2001) Acta Chim Sin (In Chinese) , vol.59 , pp. 1004-1008
    • Ling, Z.H.1    Liu, S.S.2    Li, Z.3
  • 45
    • 2542451917 scopus 로고    scopus 로고
    • Molecular eletronegativity-distance vector (MEDV-4):A two-dimensional QSAR method for the estimation and prediction of biological activities of estradiol derivatives
    • Sun L L, Zhou Y, Li G R, et al. Molecular eletronegativity-distance vector (MEDV-4):A two-dimensional QSAR method for the estimation and prediction of biological activities of estradiol derivatives. J Molecular Structure (Theochem), 2004, 679: 107-113. doi:10.1016/j.theochem.204.04.010
    • (2004) J Molecular Structure (Theochem) , vol.679 , pp. 107-113
    • Sun, L.L.1    Zhou, Y.2    Li, G.R.3
  • 46
    • 34648841203 scopus 로고    scopus 로고
    • Chongqing University Chongqing
    • Xiong Q. Eukaryotic promoter prediction. PhD Dissertation (in Chinese), Chongqing: Chongqing University, 2004,11, Ch1-9: 118+8
    • (2004) Eukaryotic Promoter Prediction
    • Xiong, Q.1
  • 47
    • 34648858772 scopus 로고    scopus 로고
    • Eukaryotic promoter recognition using backpropagation neural network
    • 2
    • Xiong Q, Wang Y, Li Z. Eukaryotic promoter recognition using backpropagation neural network. Chin J Biomed Eng, 2004, 13(2):87-92
    • (2004) Chin J Biomed Eng , vol.13 , pp. 87-92
    • Xiong, Q.1    Wang, Y.2    Li, Z.3
  • 48
    • 34648858774 scopus 로고    scopus 로고
    • Chongqing University Chongqing
    • Mei H. Peptide QSARs. PhD Dissertation (in Chinese), Chongqing: Chongqing University, 2005, 05, Ch1-9: 129+8
    • (2005) Peptide QSARs
    • Mei, H.1
  • 49
    • 4444234911 scopus 로고    scopus 로고
    • On structural parameterization and molecular modeling of peptide analogues by molecular electronegativity edge vector (VMEE): Estimation and prediction for biological activity of dipeptides
    • 5
    • Li S Z, Fu B, Wang Y, et al. On structural parameterization and molecular modeling of peptide analogues by molecular electronegativity edge vector (VMEE): Estimation and prediction for biological activity of dipeptides. J Chin Chem Soc, 2001, 48(5): 937-944, doi.wiley.com/10.1002/bip.20296, dx.doi.org/10.1002/bip.20296
    • (2001) J Chin Chem Soc , vol.48 , pp. 937-944
    • Li, S.Z.1    Fu, B.2    Wang, Y.3
  • 50
    • 33748926289 scopus 로고    scopus 로고
    • Applying generalized hydrophobicity scale of amino acids to quantitative prediction of human leukocyte antigen-A*0201-restricted cytotoxic T lymphocyte epitope
    • 12
    • Zhou P, Tian F F, Zhang M J, et al. Applying generalized hydrophobicity scale of amino acids to quantitative prediction of human leukocyte antigen-A*0201-restricted cytotoxic T lymphocyte epitope. Chin Sci Bull, 2006, 51(12): 1439-1443, doi: 101007/ s11434-006-1439-z
    • (2006) Chin Sci Bull , vol.51 , pp. 1439-1443
    • Zhou, P.1    Tian, F.F.2    Zhang, M.J.3
  • 51
    • 33748875433 scopus 로고    scopus 로고
    • A new descriptor of amino acids based on the three-dimensional vector of atomic interaction field
    • 5
    • Zhou P, Zhou Y, Wu S R, et al. A new descriptor of amino acids based on the three-dimensional vector of atomic interaction field. Chin Sci Bull 2006, 51(5): 524-529, doi: 101007/s11434-006-0524-7
    • (2006) Chin Sci Bull , vol.51 , pp. 524-529
    • Zhou, P.1    Zhou, Y.2    Wu, S.R.3
  • 52
    • 0023779206 scopus 로고
    • Sequence pattern common to T cell epitopes
    • 1
    • Rothbard J B, Taylor W R. Sequence pattern common to T cell epitopes. EMBO J, 1988, 7(1): 93-100
    • (1988) EMBO J , vol.7 , pp. 93-100
    • Rothbard, J.B.1    Taylor, W.R.2
  • 53
    • 0027251028 scopus 로고
    • Characterization of the insulin A-chain major immunogenic determinant presented by MHC class II I-Ad molecules
    • Willims D B, Ferguson J, Gariepy J, et al. Characterization of the insulin A-chain major immunogenic determinant presented by MHC class II I-Ad molecules. J Immunol, 1993, 151: 3627-3627
    • (1993) J Immunol , vol.151 , pp. 3627-3627
    • Willims, D.B.1    Ferguson, J.2    Gariepy, J.3
  • 54
    • 0023819396 scopus 로고
    • I-Ad-binding peptides derived from unrelated protein antigens share a common structural motif
    • Sette A S, Buus S, Colon S, et al. I-Ad-binding peptides derived from unrelated protein antigens share a common structural motif. J Immunol, 1988, 141: 45
    • (1988) J Immunol , vol.141 , pp. 45
    • Sette, A.S.1    Buus, S.2    Colon, S.3
  • 55
    • 0026091367 scopus 로고
    • Self peptide requirement for class II major histocompatibility complex allorecognition
    • 19
    • Demotz S, Sette A, Sakaguchi K, et al. Self peptide requirement for class II major histocompatibility complex allorecognition. Proc Natl Acad Sci USA, 1991, 88(19): 8730-8734
    • (1991) Proc Natl Acad Sci USA , vol.88 , pp. 8730-8734
    • Demotz, S.1    Sette, A.2    Sakaguchi, K.3
  • 56
    • 0023475192 scopus 로고
    • The T cell receptor
    • 4830
    • Marrack P, Kappler J. The T cell receptor. Science, 1987, 238(4830):1073-1079
    • (1987) Science , vol.238 , pp. 1073-1079
    • Marrack, P.1    Kappler, J.2
  • 57
    • 0024043076 scopus 로고
    • Interaction of an immunodominant epitope with Ia molecules in T-cell activation
    • 14
    • Adorini L, Sette A, Buus S, et al. Interaction of an immunodominant epitope with Ia molecules in T-cell activation. Proc Natl Acad Sci USA, 1988, 85(14): 5181-5185
    • (1988) Proc Natl Acad Sci USA , vol.85 , pp. 5181-5185
    • Adorini, L.1    Sette, A.2    Buus, S.3
  • 58
    • 0023747692 scopus 로고
    • Production of T-T hybrids from T cell clones. Direct comparison between cloned T cells and T hybridoma cells derived from them
    • 1
    • Ozaki S, Durum SK, Muegge K, et al. Production of T-T hybrids from T cell clones. Direct comparison between cloned T cells and T hybridoma cells derived from them. J Immunol, 1988, 141(1): 71-78
    • (1988) J Immunol , vol.141 , pp. 71-78
    • Ozaki, S.1    Durum, S.K.2    Muegge, K.3
  • 59
    • 0035263421 scopus 로고    scopus 로고
    • QSAR study of steroid benchmark and dipeptides based on MEDV-13
    • 2
    • Liu S S, Yin C S, Cai S X, et al. QSAR study of steroid benchmark and dipeptides based on MEDV-13. J Chem Inf Comput Sci, 2001, 41(2):321-329, doi: 10.1021/ci0003350
    • (2001) J Chem Inf Comput Sci , vol.41 , pp. 321-329
    • Liu, S.S.1    Yin, C.S.2    Cai, S.X.3
  • 60
    • 33749681876 scopus 로고    scopus 로고
    • Identification of encoding proteins related to SARS-CoV
    • 19
    • Mei H, Sun L L, Zhou Y, et al. Identification of encoding proteins related to SARS-CoV. Chin Sci Bull, 2004, 49(19): 2037-2040
    • (2004) Chin Sci Bull , vol.49 , pp. 2037-2040
    • Mei, H.1    Sun, L.L.2    Zhou, Y.3
  • 62
    • 34248380543 scopus 로고    scopus 로고
    • A new sequence pepresentation (FASGAI) as applied in better specificity elucidation for human immunodeficiency virus type 1 protease
    • 3
    • Liang G Z, Li Z L. A new sequence pepresentation (FASGAI) as applied in better specificity elucidation for human immunodeficiency virus type 1 protease. Biopolymers (Pept Sci), 2007, 88(3): 401-412, doi: 10.002/bip 20669
    • (2007) Biopolymers (Pept Sci) , vol.88 , pp. 401-412
    • Liang, G.Z.1    Li, Z.L.2
  • 63
    • 34250860114 scopus 로고    scopus 로고
    • Scores of generalized base properties for quantitative sequence-activity modelings for E. coli promoters based on support vector machine
    • 1
    • Liang G Z, Li Z L. Scores of generalized base properties for quantitative sequence-activity modelings for E. coli promoters based on support vector machine. J Mol Graph Model, 2007, 26(1): 269-281, doi: 10.1016/j.jmgm.2006.12. 004
    • (2007) J Mol Graph Model , vol.26 , pp. 269-281
    • Liang, G.Z.1    Li, Z.L.2
  • 64
    • 33751304637 scopus 로고    scopus 로고
    • Using scores of amino acid topological descriptors for quantitative sequence-mobility modeling of peptides based on support vector machine
    • 22
    • Liang G Z, Yang S B, Zhou Y, et al. Using scores of amino acid topological descriptors for quantitative sequence-mobility modeling of peptides based on support vector machine. Chin Sci Bull, 2006, 51(22): 2700-2705, doi: 10.1007/s11434-006-2138-5
    • (2006) Chin Sci Bull , vol.51 , pp. 2700-2705
    • Liang, G.Z.1    Yang, S.B.2    Zhou, Y.3
  • 65
    • 33846781598 scopus 로고    scopus 로고
    • Applying novel molecular electronegativity-interaction vector (MEIV) to QSPR study on collision cross section of singly protonated peptides
    • 1
    • Zhou P, Zeng H, Tian F F, et al. Applying novel molecular electronegativity-interaction vector (MEIV) to QSPR study on collision cross section of singly protonated peptides. QSAR Comb Sci, 2007, 26(1): 117-121, doi: 10.1002/qsar.200510220
    • (2007) QSAR Comb Sci , vol.26 , pp. 117-121
    • Zhou, P.1    Zeng, H.2    Tian, F.F.3
  • 66
    • 33847750668 scopus 로고    scopus 로고
    • A new two-dimensional approach to quantitative prediction for collision cross-section of more than 110 singly protonated peptides by a novel moecular electronegativity-interaction vector through quantitative structure-spectrometry relationship studies
    • 1
    • Zhou P, Mei H, Tian F F, et al. A new two-dimensional approach to quantitative prediction for collision cross-section of more than 110 singly protonated peptides by a novel moecular electronegativity-interaction vector through quantitative structure-spectrometry relationship studies. Frontiers of Chem China, 2007, 2(1): 55-64, doi:10.1007/s11458-007-0012-x
    • (2007) Frontiers of Chem China , vol.2 , pp. 55-64
    • Zhou, P.1    Mei, H.2    Tian, F.F.3
  • 67
    • 0000970724 scopus 로고    scopus 로고
    • Molecular electronegative distance vector (MEDV) related to 15 properties of alkanes
    • 6
    • Liu S S, Cai SX, Li Z. Molecular electronegative distance vector (MEDV) related to 15 properties of alkanes, J Chem Inf Comput Sci, 2000, 40(6): 1337-1348, doi: 10.1021/ci0003247
    • (2000) J Chem Inf Comput Sci , vol.40 , pp. 1337-1348
    • Liu, S.S.1    Cai, S.X.2    Li, Z.3
  • 68
    • 33748883607 scopus 로고    scopus 로고
    • Novel molecular electronegativity-interaction vector and its application in quantitative prediction for collision cross-section of singly protonated peptides
    • 6
    • Zhou P, Tian F F, Li Z L. Novel molecular electronegativity-interaction vector and its application in quantitative prediction for collision cross-section of singly protonated peptides. Chin J Anal Chem, 2006, 34(6): 778-782, doi: 10.1016/s1872-2040(06)60039-x
    • (2006) Chin J Anal Chem , vol.34 , pp. 778-782
    • Zhou, P.1    Tian, F.F.2    Li, Z.L.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.