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Volumn 51, Issue 22, 2006, Pages 2700-2705

Using scores of amino acid topological descriptors for quantitative sequence-mobility modeling of peptides based on support vector machine

Author keywords

Amino acid; Electrophoretic mobility; QSMM; SATD; SVM

Indexed keywords


EID: 33751304637     PISSN: 10016538     EISSN: 18619541     Source Type: Journal    
DOI: 10.1007/s11434-006-2138-5     Document Type: Article
Times cited : (2)

References (19)
  • 1
    • 0023192524 scopus 로고
    • Peptide quantitative structure-activity relationships, a multivariate approach
    • Hellberg S, Sjöström M, Skagerberg B, et al. Peptide quantitative structure-activity relationships, a multivariate approach. J Med Chem, 1987, 30: 1126-1135
    • (1987) J Med Chem , vol.30 , pp. 1126-1135
    • Hellberg, S.1    Sjöström, M.2    Skagerberg, B.3
  • 2
    • 33144455184 scopus 로고    scopus 로고
    • A new set of amino acid descriptors and its application in peptide QSARs
    • Mei H, Liao Z H, Zhou Y, et al. A new set of amino acid descriptors and its application in peptide QSARs. Biopolymers (Peptide Sci), 2005, 80(6): 775-786
    • (2005) Biopolymers (Peptide Sci) , vol.80 , Issue.6 , pp. 775-786
    • Mei, H.1    Liao, Z.H.2    Zhou, Y.3
  • 3
  • 6
    • 0027658970 scopus 로고
    • Counts of all walks as atomic and molecular descriptors
    • Rucker G, Rucker C. Counts of all walks as atomic and molecular descriptors. J Chem Inf Comput Sci, 1993, 33: 683-695
    • (1993) J Chem Inf Comput Sci , vol.33 , pp. 683-695
    • Rucker, G.1    Rucker, C.2
  • 7
    • 33751500112 scopus 로고
    • Topological indices and real number vertex invariants based on graph eigenvalues or eigenvectors
    • Balaban A T, Ciubotariu D, Medeleanu M. Topological indices and real number vertex invariants based on graph eigenvalues or eigenvectors. J Chem Inf Comput Sci, 1991, 31: 517-523
    • (1991) J Chem Inf Comput Sci , vol.31 , pp. 517-523
    • Balaban, A.T.1    Ciubotariu, D.2    Medeleanu, M.3
  • 8
    • 0029233860 scopus 로고
    • Molecular topology. 15. 3D distance matrices and related topological indices
    • Diudea M V, Horvath D, Graovac A. Molecular topology. 15. 3D distance matrices and related topological indices. J Chem Inf Comput Sci, 1995, 35: 129-135
    • (1995) J Chem Inf Comput Sci , vol.35 , pp. 129-135
    • Diudea, M.V.1    Horvath, D.2    Graovac, A.3
  • 10
    • 0000224701 scopus 로고    scopus 로고
    • The coding of the three-dimensional structure of molecules by molecular transforms and its application to structure-spectra correlations and studies of biological activity
    • Schuur J H, Selzer P, Gasteiger J. The coding of the three-dimensional structure of molecules by molecular transforms and its application to structure-spectra correlations and studies of biological activity. J Chem Inf Comput Sci, 1996, 36: 334-344
    • (1996) J Chem Inf Comput Sci , vol.36 , pp. 334-344
    • Schuur, J.H.1    Selzer, P.2    Gasteiger, J.3
  • 12
    • 0028819599 scopus 로고
    • Weighted holistic invariant molecular descriptors. Part 2. Theory development and applications on modeling physicochemical properties of polyaromatic hydrocarbons
    • Todeschini R, Gramatica P, Provenzani R, et al. Weighted holistic invariant molecular descriptors. Part 2. Theory development and applications on modeling physicochemical properties of polyaromatic hydrocarbons. Chemom Intell Lab Syst, 1995, 27: 221-229
    • (1995) Chemom Intell Lab Syst , vol.27 , pp. 221-229
    • Todeschini, R.1    Gramatica, P.2    Provenzani, R.3
  • 13
    • 0036589086 scopus 로고    scopus 로고
    • Structure/response correlations and similarity/diversity analysis by GETAWAY descriptors. 1. Theory of the novel 3D molecular descriptors
    • Consonni V, Todeschini R, Pavan M. Structure/response correlations and similarity/diversity analysis by GETAWAY descriptors. 1. Theory of the novel 3D molecular descriptors. J Chem Inf Comput Sci, 2002, 42: 682-692
    • (2002) J Chem Inf Comput Sci , vol.42 , pp. 682-692
    • Consonni, V.1    Todeschini, R.2    Pavan, M.3
  • 14
    • 0041530045 scopus 로고    scopus 로고
    • Process monitoring based on probabilistic PCA
    • Kim D, Lee I -B. Process monitoring based on probabilistic PCA. Chemom Intell Lab Syst, 2003, 67: 109-123
    • (2003) Chemom Intell Lab Syst , vol.67 , pp. 109-123
    • Kim, D.1    Lee, I.B.2
  • 15
    • 0032563585 scopus 로고    scopus 로고
    • Preprocessing peptide sequences for multivariate sequence-property analysis
    • Andersson P M, Sjöstrom M, Lundstedt T. Preprocessing peptide sequences for multivariate sequence-property analysis. Chemom Intell Lab Syst, 1998, 42: 41-50
    • (1998) Chemom Intell Lab Syst , vol.42 , pp. 41-50
    • Andersson, P.M.1    Sjöstrom, M.2    Lundstedt, T.3
  • 16
    • 0038724207 scopus 로고    scopus 로고
    • The importance of being earnest: Validation is the absolute essential for successful application and inerpretation of QSPR models
    • Tropsha A, Gramatica P, Gombar V K. The importance of being earnest: validation is the absolute essential for successful application and inerpretation of QSPR models. QSAR Comb Sci, 2003, 22: 69-77
    • (2003) QSAR Comb Sci , vol.22 , pp. 69-77
    • Tropsha, A.1    Gramatica, P.2    Gombar, V.K.3
  • 17
    • 1542635893 scopus 로고    scopus 로고
    • Prediction of the isoelectric point of an amino acid based on GA-PLS and SVMs
    • Liu H X, Zhang R S, Yao X J, et al. Prediction of the isoelectric point of an amino acid based on GA-PLS and SVMs. J Chem Inf Comput Sci, 2004, 44: 161-167
    • (2004) J Chem Inf Comput Sci , vol.44 , pp. 161-167
    • Liu, H.X.1    Zhang, R.S.2    Yao, X.J.3
  • 19
    • 20444390607 scopus 로고    scopus 로고
    • Prediction of electrophoretic mobilities of peptides in capillary zone electrophoresis by quantitative structure-mobility relationships using the offord model and artificial neural networks
    • Mehdi J -H, Shen Y, Hassanisadi M, et al. Prediction of electrophoretic mobilities of peptides in capillary zone electrophoresis by quantitative structure-mobility relationships using the offord model and artificial neural networks. Electrophoresis, 2005, 26: 1874-1885
    • (2005) Electrophoresis , vol.26 , pp. 1874-1885
    • Mehdi, J.H.1    Shen, Y.2    Hassanisadi, M.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.