-
1
-
-
0029882799
-
Vibrio vulnificus biotype 2, pathogenic for eels, is also an opportunistic pathogen for humans
-
Amaro, C., and E. G. Biosca. 1996. Vibrio vulnificus biotype 2, pathogenic for eels, is also an opportunistic pathogen for humans. Appl. Environ. Microbiol. 62:1454-1457.
-
(1996)
Appl. Environ. Microbiol
, vol.62
, pp. 1454-1457
-
-
Amaro, C.1
Biosca, E.G.2
-
2
-
-
0347721018
-
Simple sequence repeats (microsatellites): Mutational mechanisms and contributions to bacterial pathogenesis. A meeting review
-
Bayliss, C. D., K. M. Dixon, and E. R. Moxon. 2004. Simple sequence repeats (microsatellites): mutational mechanisms and contributions to bacterial pathogenesis. A meeting review. FEMS Immunol. Med. Microbiol. 40:11-19.
-
(2004)
FEMS Immunol. Med. Microbiol
, vol.40
, pp. 11-19
-
-
Bayliss, C.D.1
Dixon, K.M.2
Moxon, E.R.3
-
3
-
-
0033598652
-
Clinical, epidemiological, and microbiological features of Vibrio vulnificus biogroup 3 causing outbreaks of wound infection and bacteraemia in Israel
-
Bisharat, N., V. Agmon, R. Finkelstein, R. Raz, G. Ben Dror, L. Lerner, S. Soboh, R. Colodner, D. N. Cameron, D. L. Wykstra, D. L. Swerdlow, and J. J. Fanner. 1999. Clinical, epidemiological, and microbiological features of Vibrio vulnificus biogroup 3 causing outbreaks of wound infection and bacteraemia in Israel. Lancet 354:1421-1424.
-
(1999)
Lancet
, vol.354
, pp. 1421-1424
-
-
Bisharat, N.1
Agmon, V.2
Finkelstein, R.3
Raz, R.4
Ben Dror, G.5
Lerner, L.6
Soboh, S.7
Colodner, R.8
Cameron, D.N.9
Wykstra, D.L.10
Swerdlow, D.L.11
Fanner, J.J.12
-
4
-
-
33947390992
-
Serological and molecular characteristics of Vibrio vulnificus biotype 3: Evidence for high clonality
-
Bisharat, N., C. Amaro, B. Fouz, A. Llorens, and D. I. Cohen. 2007. Serological and molecular characteristics of Vibrio vulnificus biotype 3: evidence for high clonality. Microbiology 153:847-856.
-
(2007)
Microbiology
, vol.153
, pp. 847-856
-
-
Bisharat, N.1
Amaro, C.2
Fouz, B.3
Llorens, A.4
Cohen, D.I.5
-
5
-
-
11844260058
-
Hybrid Vibrio vulnificus
-
Bisharat, N., D. I. Cohen, R. M. Harding, D. Falush, D. W. Crook, T. Peto, and M. C. Maiden. 2005. Hybrid Vibrio vulnificus. Emerg. Infect. Dis. 11: 30-35.
-
(2005)
Emerg. Infect. Dis
, vol.11
, pp. 30-35
-
-
Bisharat, N.1
Cohen, D.I.2
Harding, R.M.3
Falush, D.4
Crook, D.W.5
Peto, T.6
Maiden, M.C.7
-
6
-
-
15444350252
-
The complete genome sequence of Escherichia coli K-12
-
Blattner, F. R., G. Plunkett, C. A. Bloch, N. T. Perna, V. Burland, M. Riley, J. ColladoVides, J. D. Glasner, C. K. Rode, G. F. Mayhew, J. Gregor, N. W. Davis, H. A. Kirkpatrick, M. A. Goeden, D. J. Rose, B. Mau, and Y. Shao. 1997. The complete genome sequence of Escherichia coli K-12. Science 277:1453-1474.
-
(1997)
Science
, vol.277
, pp. 1453-1474
-
-
Blattner, F.R.1
Plunkett, G.2
Bloch, C.A.3
Perna, N.T.4
Burland, V.5
Riley, M.6
ColladoVides, J.7
Glasner, J.D.8
Rode, C.K.9
Mayhew, G.F.10
Gregor, J.11
Davis, N.W.12
Kirkpatrick, H.A.13
Goeden, M.A.14
Rose, D.J.15
Mau, B.16
Shao, Y.17
-
7
-
-
33748768185
-
Genetic distinctions among clinical and environmental strains of Vibrio vulnificus
-
Chatzidaki-Livanis, M., M. A. Hubbard, K. Gordon, V. J. Harwood, and A. C. Wright. 2006. Genetic distinctions among clinical and environmental strains of Vibrio vulnificus. Appl. Environ. Microbiol. 72:6136-6141.
-
(2006)
Appl. Environ. Microbiol
, vol.72
, pp. 6136-6141
-
-
Chatzidaki-Livanis, M.1
Hubbard, M.A.2
Gordon, K.3
Harwood, V.J.4
Wright, A.C.5
-
8
-
-
10744231052
-
Comparative genome analysis of Vibrio vulnificus, a marine pathogen
-
Chen, C. Y., K. M. Wu, Y. C. Chang, C. H. Chang, H. C. Tsai, T. L. Liao, Y. M. Liu, H. J. Chen, A. B. T. Shen, J. C. Li, T. L. Su, C. P. Shao, C. T. Lee, L. I. Hor, and S. F. Tsai. 2003. Comparative genome analysis of Vibrio vulnificus, a marine pathogen. Genome Res. 13:2577-2587.
-
(2003)
Genome Res
, vol.13
, pp. 2577-2587
-
-
Chen, C.Y.1
Wu, K.M.2
Chang, Y.C.3
Chang, C.H.4
Tsai, H.C.5
Liao, T.L.6
Liu, Y.M.7
Chen, H.J.8
Shen, A.B.T.9
Li, J.C.10
Su, T.L.11
Shao, C.P.12
Lee, C.T.13
Hor, L.I.14
Tsai, S.F.15
-
9
-
-
33947245586
-
Vibrio cholerae strain typing and phylogeny study based on simple sequence repeats
-
Danin-Poleg, Y., L. A. Cohen, H. Gancz, Y. Y. Broza, H. Goldshmidt, E. Malul, L. Valinsky, L. Lerner, M. Broza, and Y. Kashi. 2007. Vibrio cholerae strain typing and phylogeny study based on simple sequence repeats. J. Clin. Microbiol. 45:736-746.
-
(2007)
J. Clin. Microbiol
, vol.45
, pp. 736-746
-
-
Danin-Poleg, Y.1
Cohen, L.A.2
Gancz, H.3
Broza, Y.Y.4
Goldshmidt, H.5
Malul, E.6
Valinsky, L.7
Lerner, L.8
Broza, M.9
Kashi, Y.10
-
10
-
-
11844281973
-
Phylogeny and strain typing of Escherichia coli, inferred from variation at mononucleotide repeat loci
-
Diamant, E., Y. Palti, R. Gur-Arie, H. Cohen, E. M. Hallerman, and Y. Kashi. 2004. Phylogeny and strain typing of Escherichia coli, inferred from variation at mononucleotide repeat loci. Appl. Environ. Microbiol. 70:2464-2473.
-
(2004)
Appl. Environ. Microbiol
, vol.70
, pp. 2464-2473
-
-
Diamant, E.1
Palti, Y.2
Gur-Arie, R.3
Cohen, H.4
Hallerman, E.M.5
Kashi, Y.6
-
11
-
-
18744372699
-
Strain typing of Borrelia burgdorferi, Borrelia afzelii, and Borrelia garinii by using multiple-locus variable-number tandem repeat analysis
-
Farlow, J., D. Postic, K. L. Smith, Z. Jay, G. Baranton, and P. Keim. 2002. Strain typing of Borrelia burgdorferi, Borrelia afzelii, and Borrelia garinii by using multiple-locus variable-number tandem repeat analysis. J. Clin. Microbiol. 40:4612-4618.
-
(2002)
J. Clin. Microbiol
, vol.40
, pp. 4612-4618
-
-
Farlow, J.1
Postic, D.2
Smith, K.L.3
Jay, Z.4
Baranton, G.5
Keim, P.6
-
12
-
-
0348051947
-
Vibrio
-
P. R. Murray, E. J. Baron, J. H. Jorgensen, M. A. Pfaller, and R. H. Yolken ed, American Society for Microbiology, Washington, DC
-
Farmer, J. J. 2003. Vibrio, p. 706-716. In P. R. Murray, E. J. Baron, J. H. Jorgensen, M. A. Pfaller, and R. H. Yolken (ed.), Manual of clinical microbiology. American Society for Microbiology, Washington, DC.
-
(2003)
Manual of clinical microbiology
, pp. 706-716
-
-
Farmer, J.J.1
-
13
-
-
1342304133
-
eBURST: Inferring patterns of evolutionary descent among clusters of related bacterial genotypes from multilocus sequence typing data
-
Feil, E. J., B. C. Li, D. M. Aanensen, W. P. Hanage, and B. G. Spratt. 2004. eBURST: inferring patterns of evolutionary descent among clusters of related bacterial genotypes from multilocus sequence typing data. J. Bacteriol. 186:1518-1530.
-
(2004)
J. Bacteriol
, vol.186
, pp. 1518-1530
-
-
Feil, E.J.1
Li, B.C.2
Aanensen, D.M.3
Hanage, W.P.4
Spratt, B.G.5
-
14
-
-
22144470480
-
Use of an automated multiple-locus, variable-number tandem repeat-based method for rapid and high-throughput genotyping of Staphylococcus aureus isolates
-
Francois, P., A. Huyghe, Y. Charbonnier, M. Bento, S. Herzig, I. Topolski, N. Fleury, D. Lew, P. Vaudaux, S. Harbarth, W. van Leeuwen, A. van Belkum, D. S. Blanc, D. Pittet, and J. Schrenzel. 2005. Use of an automated multiple-locus, variable-number tandem repeat-based method for rapid and high-throughput genotyping of Staphylococcus aureus isolates. J. Clin. Microbiol. 43:3346-3355.
-
(2005)
J. Clin. Microbiol
, vol.43
, pp. 3346-3355
-
-
Francois, P.1
Huyghe, A.2
Charbonnier, Y.3
Bento, M.4
Herzig, S.5
Topolski, I.6
Fleury, N.7
Lew, D.8
Vaudaux, P.9
Harbarth, S.10
van Leeuwen, W.11
van Belkum, A.12
Blanc, D.S.13
Pittet, D.14
Schrenzel, J.15
-
15
-
-
0033972529
-
Simple sequence repeats in Escherichia coli: Abundance, distribution, composition, and polymorphism
-
Gur-Arie, R., C. J. Cohen, Y. Eitan, L. Shelef, E. M. Hallerman, and Y. Kashi. 2000. Simple sequence repeats in Escherichia coli: abundance, distribution, composition, and polymorphism. Genome Res. 10:62-71.
-
(2000)
Genome Res
, vol.10
, pp. 62-71
-
-
Gur-Arie, R.1
Cohen, C.J.2
Eitan, Y.3
Shelef, L.4
Hallerman, E.M.5
Kashi, Y.6
-
16
-
-
0037641297
-
Population genetics of Vibrio vulnificus: Identification of two divisions and a distinct eel-pathogenic clone
-
Gutacker, M., N. Conza, C. Benagli, A. Pedroli, M. V. Bernasconi, L. Permin, R. Aznar, and J. C. Piffaretti. 2003. Population genetics of Vibrio vulnificus: identification of two divisions and a distinct eel-pathogenic clone. Appl. Environ. Microbiol. 69:3203-3212.
-
(2003)
Appl. Environ. Microbiol
, vol.69
, pp. 3203-3212
-
-
Gutacker, M.1
Conza, N.2
Benagli, C.3
Pedroli, A.4
Bernasconi, M.V.5
Permin, L.6
Aznar, R.7
Piffaretti, J.C.8
-
17
-
-
0035961748
-
Complete genome sequence of enterohemorrhagic Escherichia coll O157:H7 and genomic comparison with a laboratory strain K-12
-
Hayashi, T., K. Makino, M. Ohnishi, K. Kurokawa, K. Ishii, K. Yokoyama, C. G. Han, E. Ohtsubo, K. Nakayama, T. Murata, M. Tanaka, T. Tobe, T. Iida, H. Takami, T. Honda, C. Sasakawa, N. Ogasawara, T. Yasunaga, S. Kuhara, T. Shiba, M. Hattori, and H. Shinagawa. 2001. Complete genome sequence of enterohemorrhagic Escherichia coll O157:H7 and genomic comparison with a laboratory strain K-12. DNA Res. 8:11-22.
-
(2001)
DNA Res
, vol.8
, pp. 11-22
-
-
Hayashi, T.1
Makino, K.2
Ohnishi, M.3
Kurokawa, K.4
Ishii, K.5
Yokoyama, K.6
Han, C.G.7
Ohtsubo, E.8
Nakayama, K.9
Murata, T.10
Tanaka, M.11
Tobe, T.12
Iida, T.13
Takami, H.14
Honda, T.15
Sasakawa, C.16
Ogasawara, N.17
Yasunaga, T.18
Kuhara, S.19
Shiba, T.20
Hattori, M.21
Shinagawa, H.22
more..
-
18
-
-
17144462135
-
-
Heidelberg, J. F., J. A. Eisen, W. C. Nelson, R. A. Clayton, M. L. Gwinn, R. J. Dodson, D. H. Haft, E. K. Hickey, J. D. Peterson, L. Umayam, S. R. Gill, K. E. Nelson, T. D. Read, H. Tettelin, D. Richardson, M. D. Ermolaeva, J. Vamathevan, S. Bass, H. Y. Qin, I. Dragoi, P. Sellers, L. McDonald, T. Utterback, R. D. Fleishmann, W. C. Nierman, O. White, S. L. Salzberg, H. O. Smith, R. R. Colwell, J. J. Mekalanos, J. C. Venter, and C. M. Fraser. 2000. DNA sequence of both chromosomes of the cholera pathogen Vibrio cholerae. Nature 406:477-483.
-
Heidelberg, J. F., J. A. Eisen, W. C. Nelson, R. A. Clayton, M. L. Gwinn, R. J. Dodson, D. H. Haft, E. K. Hickey, J. D. Peterson, L. Umayam, S. R. Gill, K. E. Nelson, T. D. Read, H. Tettelin, D. Richardson, M. D. Ermolaeva, J. Vamathevan, S. Bass, H. Y. Qin, I. Dragoi, P. Sellers, L. McDonald, T. Utterback, R. D. Fleishmann, W. C. Nierman, O. White, S. L. Salzberg, H. O. Smith, R. R. Colwell, J. J. Mekalanos, J. C. Venter, and C. M. Fraser. 2000. DNA sequence of both chromosomes of the cholera pathogen Vibrio cholerae. Nature 406:477-483.
-
-
-
-
19
-
-
0026769505
-
Instability of simple sequence DNA in Saccharomyces cerevisiae
-
Henderson, S. T., and T. D. Petes. 1992. Instability of simple sequence DNA in Saccharomyces cerevisiae. Mol. Cell. Biol. 12:2749-2757.
-
(1992)
Mol. Cell. Biol
, vol.12
, pp. 2749-2757
-
-
Henderson, S.T.1
Petes, T.D.2
-
20
-
-
0029894129
-
The epidemiology of Vibrio infections in Florida, 1981-1993
-
Hlady, W. G., and K. C. Klontz. 1996. The epidemiology of Vibrio infections in Florida, 1981-1993. J. Infect. Dis. 173:1176-1183.
-
(1996)
J. Infect. Dis
, vol.173
, pp. 1176-1183
-
-
Hlady, W.G.1
Klontz, K.C.2
-
21
-
-
0031737241
-
Heterogeneity among isolates of Vibrio vulnificus recovered from eels (Anguilla anguilla) in Denmark
-
Hoi, L., I. Dalsgaard, A. DePaola, R. J. Siebeling, and A. Dalsgaard. 1998. Heterogeneity among isolates of Vibrio vulnificus recovered from eels (Anguilla anguilla) in Denmark. Appl. Environ. Microbiol. 64:4676-4682.
-
(1998)
Appl. Environ. Microbiol
, vol.64
, pp. 4676-4682
-
-
Hoi, L.1
Dalsgaard, I.2
DePaola, A.3
Siebeling, R.J.4
Dalsgaard, A.5
-
22
-
-
0031963904
-
Occurrence of Vibrio vulnificus biotypes in Danish marine environments
-
Hoi, L., J. L. Larsen, I. Dalsgaard, and A. Dalsgaard. 1998. Occurrence of Vibrio vulnificus biotypes in Danish marine environments. Appl. Environ. Microbiol. 64:7-13.
-
(1998)
Appl. Environ. Microbiol
, vol.64
, pp. 7-13
-
-
Hoi, L.1
Larsen, J.L.2
Dalsgaard, I.3
Dalsgaard, A.4
-
23
-
-
34247158704
-
Hypervariable loci that enhance the discriminatory ability of newly proposed 15-loci and 24-loci variable-number tandem repeat typing method on Mycobacterium tuberculosis strains predominated by the Beijing family
-
Iwamoto, T., S. Yoshida, K. Suzuki, M. Tomita, R. Fujiyama, N. Tanaka, Y. Kawakami, and M. Ito. 2007. Hypervariable loci that enhance the discriminatory ability of newly proposed 15-loci and 24-loci variable-number tandem repeat typing method on Mycobacterium tuberculosis strains predominated by the Beijing family. FEMS Microbiol. Lett. 270:67-74.
-
(2007)
FEMS Microbiol. Lett
, vol.270
, pp. 67-74
-
-
Iwamoto, T.1
Yoshida, S.2
Suzuki, K.3
Tomita, M.4
Fujiyama, R.5
Tanaka, N.6
Kawakami, Y.7
Ito, M.8
-
24
-
-
0030466499
-
Length polymorphism and homologies of microsatellites in several Cucurbitaceae species
-
Katzir, N., Y. DaninPoleg, G. Tzuri, Z. Karchi, U. Lavi, and P. B. Cregan. 1996. Length polymorphism and homologies of microsatellites in several Cucurbitaceae species. Theor. Appl. Genet. 93:1282-1290.
-
(1996)
Theor. Appl. Genet
, vol.93
, pp. 1282-1290
-
-
Katzir, N.1
DaninPoleg, Y.2
Tzuri, G.3
Karchi, Z.4
Lavi, U.5
Cregan, P.B.6
-
25
-
-
0032847302
-
Molecular diversity in Bacillus anthracis
-
Keim, P., A. M. Klevytska, L. B. Price, J. M. Schupp, G. Zinser, K. L. Smith, M. E. Hugh-Jones, R. Okinaka, K. K. Hill, and P. J. Jackson. 1999. Molecular diversity in Bacillus anthracis. J. Appl. Microbiol. 87:215-217.
-
(1999)
J. Appl. Microbiol
, vol.87
, pp. 215-217
-
-
Keim, P.1
Klevytska, A.M.2
Price, L.B.3
Schupp, J.M.4
Zinser, G.5
Smith, K.L.6
Hugh-Jones, M.E.7
Okinaka, R.8
Hill, K.K.9
Jackson, P.J.10
-
26
-
-
0034020175
-
Multiple-locus variable-number tandem repeat analysis reveals genetic relationships within Bacillus anthracis
-
Keim, P., L. B. Price, A. M. Klevytska, K. L. Smith, J. M. Schupp, R. Okinaka, P. J. Jackson, and M. E. Hugh-Jones. 2000. Multiple-locus variable-number tandem repeat analysis reveals genetic relationships within Bacillus anthracis. J. Bacteriol. 182:2928-2936.
-
(2000)
J. Bacteriol
, vol.182
, pp. 2928-2936
-
-
Keim, P.1
Price, L.B.2
Klevytska, A.M.3
Smith, K.L.4
Schupp, J.M.5
Okinaka, R.6
Jackson, P.J.7
Hugh-Jones, M.E.8
-
27
-
-
4444308959
-
Anthrax molecular epidemiology and forensics: Using the appropriate marker for different evolutionary scales
-
Keim, P., M. N. Van Ert, T. Pearson, A. J. Vogler, L. Y. Huynh, and D. M. Wagner. 2004. Anthrax molecular epidemiology and forensics: using the appropriate marker for different evolutionary scales. Infect. Genet. Evol. 4:205-213.
-
(2004)
Infect. Genet. Evol
, vol.4
, pp. 205-213
-
-
Keim, P.1
Van Ert, M.N.2
Pearson, T.3
Vogler, A.J.4
Huynh, L.Y.5
Wagner, D.M.6
-
28
-
-
16444380292
-
Highly diverse variable number tandem repeat loci in the E. coli O157:H7 and O55:H7 genomes for high-resolution molecular typing
-
Keys, C., S. Kemper, and P. Keim. 2005. Highly diverse variable number tandem repeat loci in the E. coli O157:H7 and O55:H7 genomes for high-resolution molecular typing. J. Appl. Microbiol. 98:928-940.
-
(2005)
J. Appl. Microbiol
, vol.98
, pp. 928-940
-
-
Keys, C.1
Kemper, S.2
Keim, P.3
-
29
-
-
0141781023
-
-
Kim, Y. R., S. E. Lee, C. M. Kim, S. Y. Kim, E. K. Shin, D. H. Shin, S. S. Chung, H. E. Choy, A. Progulske-Fox, J. D. Hillman, M. Handheld, and J. H. Rhee. 2003. Characterization and pathogenic significance of Vibrio vulnificus antigens preferentially expressed in septicemic patients. Infect. Immun. 71: 5461-5471.
-
Kim, Y. R., S. E. Lee, C. M. Kim, S. Y. Kim, E. K. Shin, D. H. Shin, S. S. Chung, H. E. Choy, A. Progulske-Fox, J. D. Hillman, M. Handheld, and J. H. Rhee. 2003. Characterization and pathogenic significance of Vibrio vulnificus antigens preferentially expressed in septicemic patients. Infect. Immun. 71: 5461-5471.
-
-
-
-
30
-
-
3242810318
-
MEGA3: Integrated software for molecular evolutionary genetics analysis and sequence alignment
-
Kumar, S., K. Tamura, and M. Nei. 2004. MEGA3: integrated software for molecular evolutionary genetics analysis and sequence alignment. Brief. Bioinform. 5:150-163.
-
(2004)
Brief. Bioinform
, vol.5
, pp. 150-163
-
-
Kumar, S.1
Tamura, K.2
Nei, M.3
-
31
-
-
0023256559
-
Slipped-strand mispairing: A major mechanism for DNA-sequence evolution
-
Levinson, G., and G. A. Gutman. 1987. Slipped-strand mispairing: a major mechanism for DNA-sequence evolution. Mol. Biol. Evol. 4:203-221.
-
(1987)
Mol. Biol. Evol
, vol.4
, pp. 203-221
-
-
Levinson, G.1
Gutman, G.A.2
-
32
-
-
22244459534
-
Multiple-locus variable number tandem repeats analysis for genetic fingerprinting of pathogenic bacteria
-
Lindstedt, B. A. 2005. Multiple-locus variable number tandem repeats analysis for genetic fingerprinting of pathogenic bacteria. Electrophoresis 26: 2567-2582.
-
(2005)
Electrophoresis
, vol.26
, pp. 2567-2582
-
-
Lindstedt, B.A.1
-
33
-
-
5344254628
-
Multiple-locus variable-number tandem-repeats analysis of Salmonella enterica subsp. enterica serovar Typhimurium using PCR multiplexing and multicolor capillary electrophoresis
-
Lindstedt, B. A., T. Vardund, L. Aas, and G. Kapperud. 2004. Multiple-locus variable-number tandem-repeats analysis of Salmonella enterica subsp. enterica serovar Typhimurium using PCR multiplexing and multicolor capillary electrophoresis. J. Microbiol. Methods 59:163-172.
-
(2004)
J. Microbiol. Methods
, vol.59
, pp. 163-172
-
-
Lindstedt, B.A.1
Vardund, T.2
Aas, L.3
Kapperud, G.4
-
34
-
-
0032936626
-
Pathogenesis of Vibrio vulnificus
-
Linkous, D. A., and J. D. Oliver. 1999. Pathogenesis of Vibrio vulnificus. FEMS Microbiol. Lett. 174:207-214.
-
(1999)
FEMS Microbiol. Lett
, vol.174
, pp. 207-214
-
-
Linkous, D.A.1
Oliver, J.D.2
-
35
-
-
22144489176
-
Comparison of multiple-locus variable-number tandem-repeat analysis with pulsed-field gel electrophoresis, spa typing, and multilocus sequence typing for clonal characterization of Staphylococcus aureus isolates
-
Malachowa, N., A. Sahat, M. Gniadkowski, J. Krzyszton-Russjan, J. Empel, J. Miedzobrodzki, K. Kosowska-Shick, P. C. Appelhaum, and W. Hryniewicz. 2005. Comparison of multiple-locus variable-number tandem-repeat analysis with pulsed-field gel electrophoresis, spa typing, and multilocus sequence typing for clonal characterization of Staphylococcus aureus isolates. J. Clin. Microbiol. 43:3095-3100.
-
(2005)
J. Clin. Microbiol
, vol.43
, pp. 3095-3100
-
-
Malachowa, N.1
Sahat, A.2
Gniadkowski, M.3
Krzyszton-Russjan, J.4
Empel, J.5
Miedzobrodzki, J.6
Kosowska-Shick, K.7
Appelhaum, P.C.8
Hryniewicz, W.9
-
36
-
-
14844345314
-
Microsatellite instability regulates transcription factor binding and gene expression
-
Martin, P., K. Makepeace, S. A. Hill, D. W. Hood, and E. R. Moxon. 2005. Microsatellite instability regulates transcription factor binding and gene expression. Proc. Natl. Acad. Sci. USA 102:3800-3804.
-
(2005)
Proc. Natl. Acad. Sci. USA
, vol.102
, pp. 3800-3804
-
-
Martin, P.1
Makepeace, K.2
Hill, S.A.3
Hood, D.W.4
Moxon, E.R.5
-
37
-
-
0032694976
-
Food-related illness and death in the United States
-
Mead, P. S., L. Slutsker, V. Dietz, L. F. Mccaig, J. S. Bresee, C. Shapiro, P. M. Griffin, and R. V. Tauxe. 1999. Food-related illness and death in the United States. Emerg. Infect. Dis. 5:607-625.
-
(1999)
Emerg. Infect. Dis
, vol.5
, pp. 607-625
-
-
Mead, P.S.1
Slutsker, L.2
Dietz, V.3
Mccaig, L.F.4
Bresee, J.S.5
Shapiro, C.6
Griffin, P.M.7
Tauxe, R.V.8
-
38
-
-
34247195626
-
Development of discriminatory multiple-locus variable number tandem repeat analysis for Bartonella henselae
-
Monteil, M., B. Durand, R. Bouchouicha, E. Petit, B. Chomel, M. Arvand, H. J. Boulouis, and N. Haddad. 2007. Development of discriminatory multiple-locus variable number tandem repeat analysis for Bartonella henselae. Microbiology 153:1141-1148.
-
(2007)
Microbiology
, vol.153
, pp. 1141-1148
-
-
Monteil, M.1
Durand, B.2
Bouchouicha, R.3
Petit, E.4
Chomel, B.5
Arvand, M.6
Boulouis, H.J.7
Haddad, N.8
-
39
-
-
0028065674
-
Adaptive evolution of highly mutable loci in pathogenic bacteria
-
Moxon, E. R., P. B. Rainey, M. A. Nowak, and R. E. Lenski. 1994. Adaptive evolution of highly mutable loci in pathogenic bacteria. Curr. Biol. 4:24-33.
-
(1994)
Curr. Biol
, vol.4
, pp. 24-33
-
-
Moxon, E.R.1
Rainey, P.B.2
Nowak, M.A.3
Lenski, R.E.4
-
40
-
-
32344431581
-
Locus-specific mutational events in a multilocus variable-number tandem repeat analysis of Escherichia coli O157:H7
-
Noller, A. C., M. C. McEllistrem, K. A. Shutt, and L. H. Harrison. 2006. Locus-specific mutational events in a multilocus variable-number tandem repeat analysis of Escherichia coli O157:H7. J. Clin. Microbiol. 44:374-377.
-
(2006)
J. Clin. Microbiol
, vol.44
, pp. 374-377
-
-
Noller, A.C.1
McEllistrem, M.C.2
Shutt, K.A.3
Harrison, L.H.4
-
41
-
-
0002536718
-
Vibrio vulnificus
-
M. P. Doyle ed, Marcel Dekker Inc, New York, NY
-
Oliver, J. D. 1989. Vibrio vulnificus, p. 569-600. In M. P. Doyle (ed.), Food-borne bacterial pathogens. Marcel Dekker Inc., New York, NY.
-
(1989)
Food-borne bacterial pathogens
, pp. 569-600
-
-
Oliver, J.D.1
-
42
-
-
34249748953
-
VNTR analysis of selected outbreaks of Burkholderia pseudomallei in Australia
-
Pearson, T., J. M. U'Ren, J. M. Schupp, G. J. Allan, P. G. Foster, M. J. Mayo, D. Gal, J. L. Choy, R. L. Daugherty, S. Kachur, C. L. Friedman, B. Leadem, S. Georgia, H. Hornstra, A. J. Vogler, D. M. Wagner, P. Keim, and B. J. Currie. 2006. VNTR analysis of selected outbreaks of Burkholderia pseudomallei in Australia. Infect. Genet. Evol. 7:416-423.
-
(2006)
Infect. Genet. Evol
, vol.7
, pp. 416-423
-
-
Pearson, T.1
U'Ren, J.M.2
Schupp, J.M.3
Allan, G.J.4
Foster, P.G.5
Mayo, M.J.6
Gal, D.7
Choy, J.L.8
Daugherty, R.L.9
Kachur, S.10
Friedman, C.L.11
Leadem, B.12
Georgia, S.13
Hornstra, H.14
Vogler, A.J.15
Wagner, D.M.16
Keim, P.17
Currie, B.J.18
-
43
-
-
0035945586
-
Genome sequence of enterohaemorrhagic Escherichia coli O157:H7
-
Perna, N. T., G. Plunkett, V. Burland, B. Mau, J. D. Glasner, D. J. Rose, G. F. Mayhew, P. S. Evans, J. Gregor, H. A. Kirkpatrick, G. Posfai, J. Hackett, S. Klink, A. Boutin, Y. Shao, L. Miller, E. J. Grotbeck, N. W. Davis, A. Linik, E. T. Dimalanta, K. D. Potamousis, J. Apodaca, T. S. Anantharaman, J. Y. Lin, G. Yen, D. C. Schwartz, R. A. Welch, and F. R. Blattner. 2001. Genome sequence of enterohaemorrhagic Escherichia coli O157:H7. Nature 409:529-533.
-
(2001)
Nature
, vol.409
, pp. 529-533
-
-
Perna, N.T.1
Plunkett, G.2
Burland, V.3
Mau, B.4
Glasner, J.D.5
Rose, D.J.6
Mayhew, G.F.7
Evans, P.S.8
Gregor, J.9
Kirkpatrick, H.A.10
Posfai, G.11
Hackett, J.12
Klink, S.13
Boutin, A.14
Shao, Y.15
Miller, L.16
Grotbeck, E.J.17
Davis, N.W.18
Linik, A.19
Dimalanta, E.T.20
Potamousis, K.D.21
Apodaca, J.22
Anantharaman, T.S.23
Lin, J.Y.24
Yen, G.25
Schwartz, D.C.26
Welch, R.A.27
Blattner, F.R.28
more..
-
44
-
-
18244401623
-
A rapid and simple PCR analysis indicates there are two subgroups of Vibrio vulnificus which correlate with clinical or environmental isolation
-
Rosche, T. M., Y. Yano, and J. D. Oliver. 2005. A rapid and simple PCR analysis indicates there are two subgroups of Vibrio vulnificus which correlate with clinical or environmental isolation. Microbiol. Immunol. 49:381-389.
-
(2005)
Microbiol. Immunol
, vol.49
, pp. 381-389
-
-
Rosche, T.M.1
Yano, Y.2
Oliver, J.D.3
-
45
-
-
33750959614
-
Application of multilocus variable-number tandem-repeat analysis for molecular typing of the agent of leptospirosis
-
Salaun, L., F. Merien, S. Gurianova, G. Baranton, and M. Picardeau. 2006. Application of multilocus variable-number tandem-repeat analysis for molecular typing of the agent of leptospirosis. J. Clin. Microbiol. 44:3954-3962.
-
(2006)
J. Clin. Microbiol
, vol.44
, pp. 3954-3962
-
-
Salaun, L.1
Merien, F.2
Gurianova, S.3
Baranton, G.4
Picardeau, M.5
-
46
-
-
33645924046
-
Multiple-locus variable-number tandem repeat analysis of Neisseria meningitidis yields groupings similar to those obtained by multilocus sequence typing
-
Schouls, L. M., A. van der Ende, M. Damen, and I. van de Pol. 2006. Multiple-locus variable-number tandem repeat analysis of Neisseria meningitidis yields groupings similar to those obtained by multilocus sequence typing. J. Clin. Microbiol. 44:1509-1518.
-
(2006)
J. Clin. Microbiol
, vol.44
, pp. 1509-1518
-
-
Schouls, L.M.1
van der Ende, A.2
Damen, M.3
van de Pol, I.4
-
47
-
-
20444445096
-
Increase in genetic diversity of Haemophilus influenzae serotype b (Hib) strains after introduction of Hib vaccination in The Netherlands
-
Schouls, L. M., A. van der Ende, I. van de Pol, C. Schot, L. Spanjaard, P. Vauterin, D. Wilderbeek, and S. Witteveen. 2005. Increase in genetic diversity of Haemophilus influenzae serotype b (Hib) strains after introduction of Hib vaccination in The Netherlands. J. Clin. Microbiol. 43:2741-2749.
-
(2005)
J. Clin. Microbiol
, vol.43
, pp. 2741-2749
-
-
Schouls, L.M.1
van der Ende, A.2
van de Pol, I.3
Schot, C.4
Spanjaard, L.5
Vauterin, P.6
Wilderbeek, D.7
Witteveen, S.8
-
48
-
-
20444400787
-
Amplified intergenic locus polymorphism as a basis for bacterial typing of Listeria spp. and Escherichia coli
-
Somer, L., Y. Danin-Poleg, E. Diamant, R. Gur-Arie, Y. Palti, and Y. Kashi. 2005. Amplified intergenic locus polymorphism as a basis for bacterial typing of Listeria spp. and Escherichia coli. Appl. Environ. Microbiol. 71:3144-3152.
-
(2005)
Appl. Environ. Microbiol
, vol.71
, pp. 3144-3152
-
-
Somer, L.1
Danin-Poleg, Y.2
Diamant, E.3
Gur-Arie, R.4
Palti, Y.5
Kashi, Y.6
-
49
-
-
0141573521
-
A PCR method based on 16S rRNA sequence for simultaneous detection of the genus Listeria and the species Listeria monocytogenes in food products
-
Somer, L., and Y. Kashi. 2003. A PCR method based on 16S rRNA sequence for simultaneous detection of the genus Listeria and the species Listeria monocytogenes in food products. J. Food Prot. 66:1658-1665.
-
(2003)
J. Food Prot
, vol.66
, pp. 1658-1665
-
-
Somer, L.1
Kashi, Y.2
-
50
-
-
10444224623
-
Displaying the relatedness among isolates of bacterial species: The eBURST approach
-
Spratt, B. G., W. P. Hanage, B. Li, D. M. Aanensen, and E. J. Feil. 2004. Displaying the relatedness among isolates of bacterial species: the eBURST approach. FEMS Microbiol. Lett. 241:129-134.
-
(2004)
FEMS Microbiol. Lett
, vol.241
, pp. 129-134
-
-
Spratt, B.G.1
Hanage, W.P.2
Li, B.3
Aanensen, D.M.4
Feil, E.J.5
-
51
-
-
0020189696
-
Vibrio vulnificus biogroup 2: New biogroup pathogenic for eels
-
Tison, D. L., M. Nishibuchi, J. D. Greenwood, and R. J. Seidler. 1982. Vibrio vulnificus biogroup 2: new biogroup pathogenic for eels. Appl. Environ. Microbiol. 44:640-646.
-
(1982)
Appl. Environ. Microbiol
, vol.44
, pp. 640-646
-
-
Tison, D.L.1
Nishibuchi, M.2
Greenwood, J.D.3
Seidler, R.J.4
-
52
-
-
5444231776
-
Multilocus variable-number tandem-repeat polymorphism among Brazilian Enterococcus faecalis strains
-
Titze-de-Almeida, R., R. J. L. Willems, J. Top, I. P. Rodrigues, R. F. Ferreira, H. Boelens, M. C. C. Brandileone, R. C. Zanella, M. S. S. Felipe, and A. van Belkum. 2004. Multilocus variable-number tandem-repeat polymorphism among Brazilian Enterococcus faecalis strains. J. Clin. Microbiol. 42:4879-4881.
-
(2004)
J. Clin. Microbiol
, vol.42
, pp. 4879-4881
-
-
Titze-de-Almeida, R.1
Willems, R.J.L.2
Top, J.3
Rodrigues, I.P.4
Ferreira, R.F.5
Boelens, H.6
Brandileone, M.C.C.7
Zanella, R.C.8
Felipe, M.S.S.9
van Belkum, A.10
-
53
-
-
5444233459
-
Multiple-locus variable-number tandem repeat analysis, a novel typing scheme to study the genetic relatedness and epidemiology of Enterococcus faecium isolates
-
Top, J., L. M. Schouls, M. J. M. Bonten, and R. J. L. Willems. 2004. Multiple-locus variable-number tandem repeat analysis, a novel typing scheme to study the genetic relatedness and epidemiology of Enterococcus faecium isolates. J. Clin. Microbiol. 42:4503-4511.
-
(2004)
J. Clin. Microbiol
, vol.42
, pp. 4503-4511
-
-
Top, J.1
Schouls, L.M.2
Bonten, M.J.M.3
Willems, R.J.L.4
-
54
-
-
34249745345
-
Assessing the reliability of eBURST using simulated populations with known ancestry
-
Turner, K. M., W. P. Hanage, C. Fraser, T. R. Connor, and B. G. Spratt. 2007. Assessing the reliability of eBURST using simulated populations with known ancestry. BMC Microbiol. 7:30.
-
(2007)
BMC Microbiol
, vol.7
, pp. 30
-
-
Turner, K.M.1
Hanage, W.P.2
Fraser, C.3
Connor, T.R.4
Spratt, B.G.5
-
55
-
-
0031838719
-
Short-sequence DNA repeats in prokaryotic genomes
-
van Belkum, A., S. Scherer, L. van Alphen, and H. Verbrugh. 1998. Short-sequence DNA repeats in prokaryotic genomes. Microbiol. Mol. Biol. Rev. 62:275-293.
-
(1998)
Microbiol. Mol. Biol. Rev
, vol.62
, pp. 275-293
-
-
van Belkum, A.1
Scherer, S.2
van Alphen, L.3
Verbrugh, H.4
-
56
-
-
33744982094
-
Effect of repeat copy number on variable-number tandem repeat mutations in Escherichia coli O157:H7
-
Vogler, A. J., C. Keys, Y. Nemoto, R. E. Colman, Z. Jay, and P. Keim. 2006. Effect of repeat copy number on variable-number tandem repeat mutations in Escherichia coli O157:H7. J. Bacteriol. 188:4253- 4263.
-
(2006)
J. Bacteriol
, vol.188
, pp. 4253-4263
-
-
Vogler, A.J.1
Keys, C.2
Nemoto, Y.3
Colman, R.E.4
Jay, Z.5
Keim, P.6
-
57
-
-
33646865401
-
Estimating relatedness and relationships using microsatellite loci with null alleles
-
Wagner, A. P., S. Creel, and S. T. Kalinowski. 2006. Estimating relatedness and relationships using microsatellite loci with null alleles. Heredity 97:336-345.
-
(2006)
Heredity
, vol.97
, pp. 336-345
-
-
Wagner, A.P.1
Creel, S.2
Kalinowski, S.T.3
-
58
-
-
1642533711
-
Rapid identification of Vibrio vulnificus in seawater by real-time quantitative TaqMan PCR
-
Wang, H. Y., and G. H. Lee. 2003. Rapid identification of Vibrio vulnificus in seawater by real-time quantitative TaqMan PCR. J. Microbiol. 41:320-326.
-
(2003)
J. Microbiol
, vol.41
, pp. 320-326
-
-
Wang, H.Y.1
Lee, G.H.2
-
59
-
-
4644231430
-
Pulsed-field gel electrophoresis analysis of Vibrio vulnificus strains isolated from Taiwan and the United States
-
Wong, H. C., S. Y. Chen, M. Y. Chen, J. D. Oliver, L. I. Hor, and W. C. Tsai. 2004. Pulsed-field gel electrophoresis analysis of Vibrio vulnificus strains isolated from Taiwan and the United States. Appl. Environ. Microbiol. 70:5153-5158.
-
(2004)
Appl. Environ. Microbiol
, vol.70
, pp. 5153-5158
-
-
Wong, H.C.1
Chen, S.Y.2
Chen, M.Y.3
Oliver, J.D.4
Hor, L.I.5
Tsai, W.C.6
-
60
-
-
0030060844
-
Distribution of Vibrio vulnificus in the Chesapeake Bay
-
Wright, A. C., R. T. Hill, J. A. Johnson, M. C. Roghman, R. R. Colwell, and J. G. Morris. 1996. Distribution of Vibrio vulnificus in the Chesapeake Bay. Appl. Environ. Microbiol. 62:717-724.
-
(1996)
Appl. Environ. Microbiol
, vol.62
, pp. 717-724
-
-
Wright, A.C.1
Hill, R.T.2
Johnson, J.A.3
Roghman, M.C.4
Colwell, R.R.5
Morris, J.G.6
-
61
-
-
24744436850
-
Variable-number tandem repeat analysis of meningococcal isolates belonging to the sequence type 162 complex
-
Yazdankhah, S. P., K. Kesanopoulos, G. Tzanakaki, J. Kremastinou, and D. A. Caugant. 2005. Variable-number tandem repeat analysis of meningococcal isolates belonging to the sequence type 162 complex. J. Clin. Microbiol. 43:4865-4867.
-
(2005)
J. Clin. Microbiol
, vol.43
, pp. 4865-4867
-
-
Yazdankhah, S.P.1
Kesanopoulos, K.2
Tzanakaki, G.3
Kremastinou, J.4
Caugant, D.A.5
-
62
-
-
16844373563
-
Use of variable-number tandem repeats to examine genetic diversity of Neisseria meningitidis
-
Yazdankhah, S. P., B. A Lindstedt, and D. A. Caugant. 2005. Use of variable-number tandem repeats to examine genetic diversity of Neisseria meningitidis. J. Clin. Microbiol. 43:1699-1705.
-
(2005)
J. Clin. Microbiol
, vol.43
, pp. 1699-1705
-
-
Yazdankhah, S.P.1
Lindstedt, B.A.2
Caugant, D.A.3
|