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Volumn 126, Issue , 2007, Pages 23-30

BGBlast: A BLAST grid implementation with database self-updating and adaptive replication

Author keywords

adaptive database replication; Bioinformatics

Indexed keywords

ADAPTIVE ALGORITHMS; BIOINFORMATICS; PROGRAM PROCESSORS; QUERY PROCESSING; SPACE TIME ADAPTIVE PROCESSING;

EID: 34548559709     PISSN: 09269630     EISSN: 18798365     Source Type: Book Series    
DOI: None     Document Type: Conference Paper
Times cited : (4)

References (17)
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    • http://searchlauncher. bcm. tmc. edu/help/AlignmentScore. html
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    • A greedy algorithm for aligning dna sequences
    • Z. Zhang, S. Schwartz, L. Wagner, and W. Miller (2000): A greedy algorithm for aligning DNA sequences, J. Comput. Biol. 2000;7:203-14
    • (2000) J. Comput Biol , vol.7 , pp. 203-214
    • Zhang, Z.1    Schwartz, S.2    Wagner, L.3    Miller, W.4
  • 6
    • 84887845051 scopus 로고    scopus 로고
    • http://www. ncbi. nlm. nih. gov/blast/megablast. html
  • 7
    • 0036226603 scopus 로고    scopus 로고
    • BLAT -The BLAST-like alignment tool
    • W. J. Kent: BLAT -the BLAST-like alignment tool, Genome Res 2002;12:656-64
    • (2002) Genome Res , vol.12 , pp. 656-664
    • Kent, W.J.1
  • 8
    • 0036202921 scopus 로고    scopus 로고
    • PatternHunter: Faster and more sensitive homology search
    • B. Ma, J. Tromp, and M. Li: PatternHunter: faster and more sensitive homology search, Bioinformatics 2002;18(3):440-5
    • (2002) Bioinformatics , vol.18 , Issue.3 , pp. 440-445
    • Ma, B.1    Tromp, J.2    Li, M.3
  • 9
    • 22344447288 scopus 로고    scopus 로고
    • Parallelisation of the blast algorithm
    • Y. Qi, F. Lin: Parallelisation of the blast algorithm, Cell Mol Biol Lett. 2005;10(2):281-5
    • (2005) Cell Mol Biol Lett. , vol.10 , Issue.2 , pp. 281-285
    • Qi, Y.1    Lin, F.2
  • 10
    • 0141506106 scopus 로고    scopus 로고
    • Parallel BLAST on split databases
    • D. R. Mathog: Parallel BLAST on split databases, Bioinformatics 2003;19(14):1865-6
    • (2003) Bioinformatics , vol.19 , Issue.14 , pp. 1865-1866
    • Mathog, D.R.1
  • 14
    • 84887838610 scopus 로고    scopus 로고
    • High performance implementation of blast using grid technology
    • I. Merelli, L. Milanesi: High performance implementation of BLAST using GRID technology, Proceedings BITS 2005: p. 59
    • (2005) Proceedings BITS , pp. 59
    • Merelli, I.1    Milanesi, L.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.