Protein elasticity determined by pressure tuning of the tyrosine residue of ubiquitin

Journal of Chemical Physics

Volumn 127, Issue 9, 2007, Pages

  Somoza, Mark M ^a   Wiedersich, Johannes ^a   Friedrich, Josef ^a  

^a TECHNICAL UNIVERSITY OF MUNICH   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACIDS; COMPRESSIBILITY; ELASTICITY; SOLVENTS; THERMAL EFFECTS;

ELASTIC BEHAVIOR; PRESSURE SHIFTS; SPECTRAL SHIFT;

PROTEINS;

TYROSINE; UBIQUITIN;

ARTICLE; CHEMICAL MODEL; CHEMICAL STRUCTURE; CHEMISTRY; COMPUTER SIMULATION; ELASTICITY; MECHANICAL STRESS; PRESSURE; PROTEIN CONFORMATION; ULTRASTRUCTURE;

COMPUTER SIMULATION; ELASTICITY; MODELS, CHEMICAL; MODELS, MOLECULAR; PRESSURE; PROTEIN CONFORMATION; STRESS, MECHANICAL; TYROSINE; UBIQUITIN;

EID: 34548504768     PISSN: 00219606     EISSN: None     Source Type: Journal    
DOI: 10.1063/1.2768352     Document Type: Article

References (29)

1. M. Köhler, J. Friedrich, and J. Fidy, Biochim. Biophys. Acta 1386, 255 (1998).
2. C. Scharnagl, M. Reif, and J. Friedrich, Biochim. Biophys. Acta 1749, 187 (2005).
3. Y. Berlin, A. Burin, J. Friedrich, and J. Köhler, Phys. Life Rev. 3, 262 (2006).
4. T. Sesselmann, W. Richter, and D. Haarer, Europhys. Lett. 2, 947 (1986).
5. H. Lesch, J. Schlichter, J. Friedrich, and J. M. Vanderkooi, Biophys. J. 86, 467 (2004).
6. B. Gavish, E. Gratton, and C. J. Hardy, Proc. Natl. Acad. Sci. U.S.A. 80, 750 (1983).
7. K. Gekko and H. Noguchi, J. Phys. Chem. 83, 2706 (1979).
8. T. V. Chalikian, A. P. Sarvazyan, and K. J. Breslauer, Biophys. Chem. 51, 89 (1994).
9. T. V. Chalikian and K. J. Breslauer, Proc. Natl. Acad. Sci. U.S.A. 93, 1012 (1996).
10. T. V. Chalikian, Annu. Rev. Biophys. Biomol. Struct. 32, 207 (2003).
11. V. V. Ponkratov, J. Wiedersich, J. Friedrich, and J. M. Vanderkoi, J. Chem. Phys. 126, 165104 (2007).
12. C. Schnell, C. Scharnagl, and J. Friedrich, Phys. Chem. Chem. Phys. 8, 1315 (2006).
13. C. Schnell, M. Reif, C. Scharnagl, and J. Friedrich, Phys. Chem. Chem. Phys. 7, 2217 (2005).
14. H. Frauenfelder, H. Hartmann, M. Karplus, Biochemistry 26, 254 (1987).
15. H. Herberhold and R. Winter, Biochemistry 41, 2396 (2002).
16. A. Varshavsky, Protein Sci. 15, 647 (2006).
17. S. Vijaykumar, C. E. Bugg, K. D. Wilkinson, and W. J. Cook, Proc. Natl. Acad. Sci. U.S.A. 82, 3582 (1985).
18. M. M. Somoza, V. V. Ponkratov, and J. Friedrich, J. Chem. Phys. 125, 194713 (2006).
19. M. Stübner, C. Hecht, and J. Friedrich, Biophys. J. 83, 3553 (2002).
20. M. Stübner, C. Hecht, E. Schneider, and J. Friedrich, Phys. Chem. Chem. Phys. 4, 6080 (2002).
21. B. B. Laird and J. L. Skinner, J. Chem. Phys. 90, 3274 (1989).
22. G. J. Piermarini, S. Block, J. D. Barnett, and R. A. Forman, J. Appl. Phys. 46, 2774 (1975).
23. M. Noronha, J. C. Lima, M. Bastos, H. Santos, and A. L. Ma̧anita, Biophys. J. 87, 2609 (2004).
24. A. L. Tournier and J. C. Smith, Phys. Rev. Lett. 91, 208106 (2003).
25. J. L. Richards and S. A. Rice, J. Chem. Phys. 54, 2014 (1971).
26. F. Tanaka, M. Okamoto, S. Yamashita, and H. Teranishi, Chem. Phys. Lett. 123, 295 (1986).
27. P. C. Johnson and H. W. Offen, Chem. Phys. Lett. 6, 505 (1970).
28. D. B. Calhoun, J. M. Vanderkooi, G. V. Woodrow, and S. W. Englander, Biochemistry 22, 1526 (1983).
29. J. Domanus, G. B. Strambini, and W. C. Galley, Photochem. Photobiol. 31, 15 (1980).