Enhanced förster resonance energy transfer on single metal particle. 2. Dependence on donor-acceptor separation distance, particle size, and distance from metal surface

Journal of Physical Chemistry C

Volumn 111, Issue 32, 2007, Pages 11784-11792

  Zhang, Jian ^a   Fu, Yi ^a   Chowdhury, Mustafa H ^a   Lakowicz, Joseph R ^a  

^a UNIVERSITY OF MARYLAND SCHOOL OF MEDICINE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BIOMOLECULES; ENERGY TRANSFER; FINITE DIFFERENCE TIME DOMAIN METHOD; METALS; OLIGONUCLEOTIDES; RESONANCE; SURFACE REACTIONS;

FLUORESCENCE DETECTION; FORSTER RESONANCE ENERGY TRANSFER (FRET); HYBRIDIZATION;

MOLECULAR DYNAMICS;

EID: 34548207727     PISSN: 19327447     EISSN: 19327455     Source Type: Journal    
DOI: 10.1021/jp067887r     Document Type: Article

References (81)

1. Lakowicz, J. R. Principles of Fluorescence Spectroscopy, 3rd ed.; Kluwer Academic/Plenum Publishers: New York, 2006.
2. (a) Lakowicz, J. R. Anal. Biochem. 2005, 337, 171.
3. (b) Lakowicz., J. R. Anal. Biochem. 2001, 298, 1.
4. Gryczynski, I.; Malicka, J.; Shen, Y. B.; Gryczynski, Z.; Lakowicz, J. R. J. Phys. Chem. B 2002, 106, 2191.
5. (b) Asian, K.; Huang, J.; Wilson, G. M.; Geddes, C. D. J. Am. Chem. Soc. 2006, 128, 4206.
6. (a) Shen, Y.; Swiatkiewicz, J.; Lin, T.-C.; Markowicz, P.; Prasad, P. N. J. Phys. Chem. B. 2002, 106, 4040.
7. (b) Lee, I.-Y. S.; Suzuki, H.; Ito, K.; Yasuda, Y. J. Phys. Chem. B 2004, 108, 19368.
8. (c) Yonzon, C. R.; Jeoung, E.; Zou, S.; Schatz, G. C.; Mrksich, M.; Van Duyne, R. P. J. Am. Chem. Soc. 2004, 126, 12669.
9. (d) Song, J.-H.; Atay, T.; Shi, S.; Urabe, H.; Nurmikko, A. V. Nano Lett. 2005, 5, 1557.
10. (e) Kawasaki, M.; Mine, S. J. Phys. Chem. B 2005, 109, 17254.
11. (a) Yu, F.; Persson, B.; Lofas, S.; Knoll, W. J. Am. Chem. Soc. 2004, 126, 8902.
12. (b) Ekgasit, S.; Thammacharoen, C.; Yu, F.; Knoll, W. Anal. Chem. 2004, 76, 2210.
13. (c) Baluschev, S.; Yu, F.; Miteva, T.; Ahl, S.; Yasuda, A.; Nelles, G.; Knoll, W.; Wegner, G. Nano Lett. 2005, 5, 2482.
14. (a) Futamata, M.; Maruyama, Y.; Ishikawa, M. J. Phys. Chem. B 2003, 107, 7607.
15. (b) Sherry, L. J.; Chang, S.-H.; Schatz, G. C.; Van Duyne, R. P.; Wiley, B. J.; Xia, Y. Nano Lett. 2005, 5, 2034.
16. (c) Oubre, C.; Nordlander, P. J. Phys. Chem. B 2005, 109, 10042.
17. (d) Wang, H.; Goodrich, G. P.; Tam, F.; Oubre, C.; Nordlander, P.; Halas, N. J. J. Phys. Chem. B 2005, 109, 11083.
18. (a) Sokolov, K.; Chumanov, G.; Cotton, T. M. Anal. Chem. 1998, 70, 3898.
19. (b) Tarcha, P. J.; De Saja-Gonzalez, J.; Rodriguez-Llorente, S.; Aroca, R. Appl. Spectrosc. 1999, 53, 43.
20. (c) De Saja-Gonzalez, J.; Aroca, R.; Nagao, Y.; De Saja, J. A. Spectrochim. Acta A 1997, 53, 173.
21. (a) Kummerlen, J.; Leitner, A.; Brunner, H.; Aussenegg, F. R.; Wokaun, A. Mol. Phys. 1993, 80, 1031.
22. (b) Antunes, P. A.; Constantino, C. J. L.; Aroca, R. F.; Duff, J. Langmuir 2001, 17, 2958.
23. (c) Kamat, P. V. J. Phys. Chem. B 2002, 106, 7729.
24. (c) Kelly, K. L.; Coronado, E.; Zhao, L. L.; Schatz, G. C. J. Phys. Chem. B 2003, 107, 668.
25. (d) Hao, E.; Li, S.; Bailey, R. C.; Zou, S.; Schatz, G. C.; Hupp, J. T. J. Phys. Chem. B 2004, 108, 1224.
26. (a) Kumbhar, A. S.; Kinnan, M. K.; Chumanov, G. J. Am. Chem. Soc. 2005, 127, 12444.
27. (b) Bruzzone, S.; Malvaldi, M.; Arrighini, G. P.; Guidotti, C. J. Phys. Chem. B. 2005, 109, 3807.
28. (c) Hubert, C.; Rumyantseva, A.; Lerondel, G.; Grand, J.; Kostcheev, S.; Billot, L.; Vial, A.; Bachelot, R.; Royer, P.; Chang, S.-h.; Gray, S. K.; Wiederrecht, G. P.; Schatz, G. C. Nano Lett. 2005, 5, 615.
29. (d) Millstone, J. E.; Park, S.; Shuford, K. L.; Qin, L.; Schatz, G. C.; Mirkin, C. A. J. Am. Chem. Soc. 2005, 127, 5312.
30. (a) Tews, K. H. J. Lumin. 1974, 9, 223.
31. (b) Chance, R. R.; Prock, A.; Silbey, R. J. Chem. Phys. 1974, 60, 2744.
32. (c) Persson, B. N. J. J. Phys. C: Solid State Phys. 1978, 11, 4251.
33. (d) Gersten, J.; Nitzan, A. J. Chem. Phys. 1981, 75, 1139.
34. (e) Ruppin, R. J. Chem. Phys. 1982, 76, 1681.
35. (f) Barnes, W. L. J. Modern Opt. 1998, 45, 661.
36. Lakowicz, J. R. Emerging biomedical application of time-resolved florescence spectroscopy. In Topics in Fluorescence spectroscopy, Vol. 4, Probe Design and Chemical Sensing; Lakowicz, J. R., Ed.; Plenum Press: New York, 1994.
37. (a) Citrin, D. S. Nano Lett. 2004, 4, 1561.
38. (b) Citrin, D. S. Nano Lett. 2005, 5, 985.
39. (a) Hua, X. M.; Gersten, J. I., Nitzan, A. J. Chem. Phys. 1985, 83, 3650.
40. (b) Gersten, J. I.; Nitzan, A. Chem. Phys. Lett. 1984, 104, 31.
41. (a) Malicka, J.; Gryczynski, I.; Fang, J.; Kusba, J.; Lakowicz, J. R. Anal. Biochem. 2003, 315, 160.
42. (b) Lakowicz, J. R; Kusba, J.; Shen, Y.; Malicka, J.; D'Auria, S.; Gryczynski, Z.; Gryczynski, I. J. Fluoresc. 2003, 13, 69.
43. Zhang, J.; Fu, Y.; Lakowicz, J. R. J. Chem. Phys. B 2007, 111, 50.
44. Aguila, A.; Murray, R. W. Langmuir 2000, 16, 5949.
45. (a) Chen, S.; Wang, Z. L.; Ballato, J.; Foulger, S. H.; Carroll, D. L. J. Am. Chem. Soc. 2003, 125, 16186.
46. (b) Nikoobakht, B.; El-Sayed, M. A. Chem. Mater. 2003, 15, 1957.
47. (c) Orendorff, C. J.; Murphy, C. J. J. Phys. Chem. B 2006, 110, 3990.
48. (a) Huang, T.; Murray, R. W. Langmuir 2002, 18, 7077.
49. (b) Huang, T.; Murray, R. W. J. Phys. Chem. B 2001, 105, 12498.
50. (a) Templeton, A. C.; Wuelfing, W. P.; Murray, R. W. Acc. Chem. Res. 2000, 33, 27.
51. (b) Ingram, R. S.; Hostetler, M. J.; Murray, R. W. J. Am. Chem. Soc. 1997, 119, 9175.
52. Zhang, J.; Malicka, J.; Gryczynski, I.; Lakowicz, J. R. J. Phys. Chem. B 2005, 109, 7643.
53. (a) Drexhage, K. H. J. Lumin. 1970, 12, 693.
54. (b) Drexhage, K. H. Progress in Optics XII; Wolf, E., Ed.; North Holland: Amsterdam, 1974.
55. Zhang, J.; Roll, D.; Geddes, C. D.; Lakowicz, J. R. J. Phys. Chem. B 2004, 108, 12210.
56. (a) Hayat, M. A., Ed. Colloidal Gold: Principles, Methods, and Applications; Academic Press: San Diego, CA, 1991.
57. (b) Feldheim, D. L.; Foss, C. A. Metal Nanoparticles. Synthesis, Characterization and Applications; Marcel Dekker, Inc.: New York, 2002.
58. Taflove, A.; Hagness, S. C. Computational Electrodynamics: The Finite-Difference Time-Domain Method; Artech House: Boston, 2000.
59. Yee, K. S. Numerical solution of initial boundary value problems involving Maxwell's equations in isotropic media. IEEE Trans. Antennas Propag. 1966, AP-14, 302-307.
60. Yang, P.; Liou, N. K. J. Opt. Soc. Am. A 1995, 12, 162.
61. Yang, P.; Liou, N. K. J. Opt. Soc. Am. A 1996, 13, 2072.
62. Gray, S. K.; Kupka, T. Phys. Rev. B 2003, 68, 045415.
63. Chang, S.-H.; Gray, S. K.; Schatz, G. C. Opt. Express 2005, 13, 3150.
64. Prather, D. W.; Shi, S. J. Opt. Soc. Am. A 1999, 16, 1131.
65. Maier, S. A.; Kik, P. G.; Atwater, H. A. Appl. Phys. Lett. 2002, 81, 1714.
66. Shao, D. B.; Chen, S. C. Opt. Express 2005, 13, 6964.
67. Guiffaunt, G.; Mahdjoubi, K. IEEE Trans. Antennas Propag. 2001, 43, 94.
68. Sullivan, D. M. Electromagnetic simulation using the FDTD method; IEEE Press: New York, 2000.
69. Berenger, J. P. J. Comput. Phys. 1994, 114, 185.
70. Teflove, A.; Brodwin, M. E. IEEE Trans. Microwave Theory Tech. 1975, 23, 623.
71. Reference Guide for FDTD Solutions, Release 5.0, 2007; http://www.lumerical.com/fdtd.
72. (a) Templeton, A. C.; Hostetler, M. J.; Warmoth, E. K.; Chen, S.; Hartshorn, C. M.; Krishnamurthy, V. M.; Forbes, M. D. E.; Murray, R. W. J. Am. Chem. Soc. 1998, 120, 4845.
73. (b) Templeton, A. C.; Hostetler, M. J.; Kraft, C. T.; Murray, R. W. J. Am. Chem. Soc. 1998, 120, 1906.
74. (a) Rosi, N. L.; Mirkin, C. A. Chem. Rev. 2005, 105, 1547.
75. (b) Wabuyele, M. B.; Vo-Dinh, T. Anal. Biochem. 2003, 77, 7810.
76. (a) Fu, Y.; Lakowicz, J. R. Anal. Chem. 2006, 78, 6238.
77. (b) Fu, Y.; Lakowicz, J. R. J. Phys. Chem. B 2006, 110, 22557.
78. Zhang, J.; Matveeva, E.; Gryczynski, I.; Leonenko, Z.; Lakowicz, J. R. J. Phys. Chem. B 2005, 109, 7969.
79. (a) Bemey, C.; Danuser, G. Biophys. J. 2003, 84, 3992.
80. (b) Ha, T.; Enderle, Th.; Ogletree, D. F.; Chemla, D. S.; Selvin, P. R.; Weiss, S. Proc. Natl. Acad. Sci. U.S.A. 1996, 12, 6264.
81. (c) Koberling, F. FRET Analysis of Free Diffusing Molecules using the MicroTime 200; PicoQuant GmbH, 2004 (6).