-
1
-
-
3342877839
-
Collective motions in HIV-1 reverse transcriptase: Examination of flexibility and enzyme function
-
Bahar, I., B. Erman, R. L. Jernigan, A. R. Atilgan, and D. G. Covell. 1999. Collective motions in HIV-1 reverse transcriptase: examination of flexibility and enzyme function. J. Mol. Biol. 285:1023-1037.
-
(1999)
J. Mol. Biol
, vol.285
, pp. 1023-1037
-
-
Bahar, I.1
Erman, B.2
Jernigan, R.L.3
Atilgan, A.R.4
Covell, D.G.5
-
2
-
-
0024423465
-
HIV-1 reverse transcriptase specifically interacts with the anticodon domain of its cognate primer tRNA
-
Barat, C., V. Lullien, O. Schatz, G. Keith, M. T. Nugeyre, F. Gruninger-Leitch, F. Barre-Sinoussi, S. F. LeGrice, and J. L. Darlix. 1989. HIV-1 reverse transcriptase specifically interacts with the anticodon domain of its cognate primer tRNA. EMBO J. 8:3279-3285.
-
(1989)
EMBO J
, vol.8
, pp. 3279-3285
-
-
Barat, C.1
Lullien, V.2
Schatz, O.3
Keith, G.4
Nugeyre, M.T.5
Gruninger-Leitch, F.6
Barre-Sinoussi, F.7
LeGrice, S.F.8
Darlix, J.L.9
-
3
-
-
0025303605
-
Ribosomal frameshifting in the yeast retrotransposon Ty: TRNAs induce slippage on a 7 nucleotide minimal site
-
Belcourt, M. F., and P. J. Farabaugh. 1990. Ribosomal frameshifting in the yeast retrotransposon Ty: tRNAs induce slippage on a 7 nucleotide minimal site. Cell 62:339-352.
-
(1990)
Cell
, vol.62
, pp. 339-352
-
-
Belcourt, M.F.1
Farabaugh, P.J.2
-
4
-
-
0021799352
-
Ty elements transpose through an RNA intermediate
-
Boeke, J. D., D. J. Garfinkel, C. A. Styles, and G. R. Fink. 1985. Ty elements transpose through an RNA intermediate. Cell 40:491-500.
-
(1985)
Cell
, vol.40
, pp. 491-500
-
-
Boeke, J.D.1
Garfinkel, D.J.2
Styles, C.A.3
Fink, G.R.4
-
5
-
-
0036240008
-
Inhibition of reverse transcription in vivo by elevated manganese ion concentration
-
Bolton, E. C., A. S. Mildvan, and J. D. Boeke. 2002. Inhibition of reverse transcription in vivo by elevated manganese ion concentration. Mol. Cell 9:879-889.
-
(2002)
Mol. Cell
, vol.9
, pp. 879-889
-
-
Bolton, E.C.1
Mildvan, A.S.2
Boeke, J.D.3
-
6
-
-
0026579205
-
Initiator methionine tRNA is essential for Ty1 transposition in yeast
-
Chapman, K. B., A. S. Bystrom, and J. D. Boeke. 1992. Initiator methionine tRNA is essential for Ty1 transposition in yeast. Proc. Natl. Acad. Sci. USA 89:3236-3240.
-
(1992)
Proc. Natl. Acad. Sci. USA
, vol.89
, pp. 3236-3240
-
-
Chapman, K.B.1
Bystrom, A.S.2
Boeke, J.D.3
-
7
-
-
0029120982
-
Divalent cation modulation of the ribonuclease functions of human immunodeficiency virus reverse transcriptase
-
Cirino, N. M., C. E. Cameron, J. S. Smith, J. W. Rausch, M. J. Roth, S. J. Benkovic, and S. F. Le Grice. 1995. Divalent cation modulation of the ribonuclease functions of human immunodeficiency virus reverse transcriptase. Biochemistry 34:9936-9943.
-
(1995)
Biochemistry
, vol.34
, pp. 9936-9943
-
-
Cirino, N.M.1
Cameron, C.E.2
Smith, J.S.3
Rausch, J.W.4
Roth, M.J.5
Benkovic, S.J.6
Le Grice, S.F.7
-
8
-
-
0034002794
-
Metal-ion stoichiometry of the HIV-1 RT ribonuclease H domain: Evidence for two mutually exclusive sites leads to new mechanistic insights on metal-mediated hydrolysis in nucleic acid biochemistry
-
Cowan, J. A., T. Ohyama, K. Howard, J. W. Rausch, S. M. Cowan, and S. F. Le Grice. 2000. Metal-ion stoichiometry of the HIV-1 RT ribonuclease H domain: evidence for two mutually exclusive sites leads to new mechanistic insights on metal-mediated hydrolysis in nucleic acid biochemistry. J. Biol. Inorg. Chem. 5:67-74.
-
(2000)
J. Biol. Inorg. Chem
, vol.5
, pp. 67-74
-
-
Cowan, J.A.1
Ohyama, T.2
Howard, K.3
Rausch, J.W.4
Cowan, S.M.5
Le Grice, S.F.6
-
9
-
-
0036713572
-
Mutations in the ribonuclease H active site of HIV-RT reveal a role for this site in stabilizing enzyme-primer-template binding
-
Cristofaro, J. V., J. W. Rausch, S. F. Le Grice, and J. J. DeStefano. 2002. Mutations in the ribonuclease H active site of HIV-RT reveal a role for this site in stabilizing enzyme-primer-template binding. Biochemistry 41:10968-10975.
-
(2002)
Biochemistry
, vol.41
, pp. 10968-10975
-
-
Cristofaro, J.V.1
Rausch, J.W.2
Le Grice, S.F.3
DeStefano, J.J.4
-
10
-
-
0026082573
-
Single-step selection for Ty1 element retrotransposition
-
Curcio, M. J., and D. J. Garfinkel. 1991. Single-step selection for Ty1 element retrotransposition. Proc. Natl. Acad. Sci. USA 88:936-940.
-
(1991)
Proc. Natl. Acad. Sci. USA
, vol.88
, pp. 936-940
-
-
Curcio, M.J.1
Garfinkel, D.J.2
-
11
-
-
2142812180
-
Role of RNA primers in initiation of minus-strand and plus-strand DNA synthesis of the yeast retrotransposon Ty1
-
Friant, S., T. Heyman, F. X. Wilhelm, and M. Wilhelm. 1996. Role of RNA primers in initiation of minus-strand and plus-strand DNA synthesis of the yeast retrotransposon Ty1. Biochimie 78:674-680.
-
(1996)
Biochimie
, vol.78
, pp. 674-680
-
-
Friant, S.1
Heyman, T.2
Wilhelm, F.X.3
Wilhelm, M.4
-
12
-
-
0022129513
-
Ty element transposition: Reverse transcriptase and virus-like particles
-
Garfinkel, D. J., J. D. Boeke, and G. R. Fink. 1985. Ty element transposition: reverse transcriptase and virus-like particles. Cell 42:507-517.
-
(1985)
Cell
, vol.42
, pp. 507-517
-
-
Garfinkel, D.J.1
Boeke, J.D.2
Fink, G.R.3
-
13
-
-
0026448638
-
Human immunodeficiency virus type 1 reverse transcriptase: Spatial and temporal relationship between the polymerase and RNase H activities
-
Gopalakrishnan, V., J. A. Peliska, and S. J. Benkovic. 1992. Human immunodeficiency virus type 1 reverse transcriptase: spatial and temporal relationship between the polymerase and RNase H activities. Proc. Natl. Acad. Sci. USA 89:10763-10767.
-
(1992)
Proc. Natl. Acad. Sci. USA
, vol.89
, pp. 10763-10767
-
-
Gopalakrishnan, V.1
Peliska, J.A.2
Benkovic, S.J.3
-
14
-
-
10744226166
-
Two-metal ion mechanism of RNA cleavage by HIV RNase H and mechanism-based design of selective HIV RNase H inhibitors
-
Klumpp, K., J. Q. Hang, S. Rajendran, Y. Yang, A. Derosier, P. Wong Kai In, H. Overton, K. E. Parkes, N. Cammack, and J. A. Martin. 2003. Two-metal ion mechanism of RNA cleavage by HIV RNase H and mechanism-based design of selective HIV RNase H inhibitors. Nucleic Acids Res. 31:6852-6859.
-
(2003)
Nucleic Acids Res
, vol.31
, pp. 6852-6859
-
-
Klumpp, K.1
Hang, J.Q.2
Rajendran, S.3
Yang, Y.4
Derosier, A.5
Wong Kai In, P.6
Overton, H.7
Parkes, K.E.8
Cammack, N.9
Martin, J.A.10
-
15
-
-
0028889152
-
Mutations in PMR1 suppress oxidative damage in yeast cells lacking superoxide dismutase
-
Lapinskas, P. J., K. W. Cunningham, X. F. Liu, G. R. Fink, and V. C. Culotta. 1995. Mutations in PMR1 suppress oxidative damage in yeast cells lacking superoxide dismutase. Mol. Cell. Biol. 15:1382-1388.
-
(1995)
Mol. Cell. Biol
, vol.15
, pp. 1382-1388
-
-
Lapinskas, P.J.1
Cunningham, K.W.2
Liu, X.F.3
Fink, G.R.4
Culotta, V.C.5
-
16
-
-
0028800299
-
Plus-strand strong-stop DNA synthesis in retrotransposon Ty1
-
Lauermann, V., K. Nam, J. Trambley, and J. D. Boeke. 1995. Plus-strand strong-stop DNA synthesis in retrotransposon Ty1. J. Virol. 69:7845-7850.
-
(1995)
J. Virol
, vol.69
, pp. 7845-7850
-
-
Lauermann, V.1
Nam, K.2
Trambley, J.3
Boeke, J.D.4
-
17
-
-
0028789990
-
Purification and characterization of human immunodeficiency virus type 1 reverse transcriptase
-
Le Grice, S. F., C. E. Cameron, and S. J. Benkovic. 1995. Purification and characterization of human immunodeficiency virus type 1 reverse transcriptase. Methods Enzymol. 262:130-144.
-
(1995)
Methods Enzymol
, vol.262
, pp. 130-144
-
-
Le Grice, S.F.1
Cameron, C.E.2
Benkovic, S.J.3
-
18
-
-
0037135570
-
Mutating conserved residues in the ribonuclease H domain of Ty3 reverse transcriptase affects specialized cleavage events
-
Lener, D., S. R. Budihas, and S. F. Le Grice. 2002. Mutating conserved residues in the ribonuclease H domain of Ty3 reverse transcriptase affects specialized cleavage events. J. Biol. Chem. 277:26486-26495.
-
(2002)
J. Biol. Chem
, vol.277
, pp. 26486-26495
-
-
Lener, D.1
Budihas, S.R.2
Le Grice, S.F.3
-
19
-
-
0034917751
-
Phylogenetic analysis of ribonuclease H domains suggests a late, chimeric origin of LTR retrotransposable elements and retroviruses
-
Malik, H. S., and T. H. Eickbush. 2001. Phylogenetic analysis of ribonuclease H domains suggests a late, chimeric origin of LTR retrotransposable elements and retroviruses. Genome Res. 11:1187-1197.
-
(2001)
Genome Res
, vol.11
, pp. 1187-1197
-
-
Malik, H.S.1
Eickbush, T.H.2
-
20
-
-
0022340976
-
Reverse transcriptase activity and Ty RNA are associated with virus-like particles in yeast
-
Mellor, J., M. H. Malim, K. Gull, M. F. Tuite, S. McCready, T. Dibbayawan, S. M. Kingsman, and A. J. Kingsman. 1985. Reverse transcriptase activity and Ty RNA are associated with virus-like particles in yeast. Nature 318:583-586.
-
(1985)
Nature
, vol.318
, pp. 583-586
-
-
Mellor, J.1
Malim, M.H.2
Gull, K.3
Tuite, M.F.4
McCready, S.5
Dibbayawan, T.6
Kingsman, S.M.7
Kingsman, A.J.8
-
21
-
-
0026501752
-
A rapid method for localized mutagenesis of yeast genes
-
Muhlrad, D., R. Hunter, and R. Parker. 1992. A rapid method for localized mutagenesis of yeast genes. Yeast 8:79-82.
-
(1992)
Yeast
, vol.8
, pp. 79-82
-
-
Muhlrad, D.1
Hunter, R.2
Parker, R.3
-
22
-
-
0023160210
-
Processing of TY1 proteins and formation of Ty1 virus-like particles in Saccharomyces cerevisiae
-
Muller, F., K. H. Bruhl, K. Freidel, K. V. Kowallik, and M. Ciriacy. 1987. Processing of TY1 proteins and formation of Ty1 virus-like particles in Saccharomyces cerevisiae. Mol. Gen. Genet. 207:421-429.
-
(1987)
Mol. Gen. Genet
, vol.207
, pp. 421-429
-
-
Muller, F.1
Bruhl, K.H.2
Freidel, K.3
Kowallik, K.V.4
Ciriacy, M.5
-
23
-
-
0026486193
-
Mechanism of DNA strand transfer reactions catalyzed by HIV-1 reverse transcriptase
-
Peliska, J. A., and S. J. Benkovic. 1992. Mechanism of DNA strand transfer reactions catalyzed by HIV-1 reverse transcriptase. Science 258:1112-1118.
-
(1992)
Science
, vol.258
, pp. 1112-1118
-
-
Peliska, J.A.1
Benkovic, S.J.2
-
24
-
-
2942525660
-
Binding, bending and bonding': Polypurine tract-primed initiation of plus-strand DNA synthesis in human immunodeficiency virus
-
Rausch, J. W., and S. F. Le Grice. 2004. 'Binding, bending and bonding': polypurine tract-primed initiation of plus-strand DNA synthesis in human immunodeficiency virus. Int. J. Biochem. Cell. Biol. 36:1752-1766.
-
(2004)
Int. J. Biochem. Cell. Biol
, vol.36
, pp. 1752-1766
-
-
Rausch, J.W.1
Le Grice, S.F.2
-
25
-
-
0035868713
-
Crystal structure of HIV-1 reverse transcriptase in complex with a polypurine tract RNA: DNA
-
Sarafianos, S. G., K. Das, C. Tantillo, A. D. Clark, Jr., J. Ding, J. M. Whitcomb, P. L. Boyer, S. H. Hughes, and E. Arnold. 2001. Crystal structure of HIV-1 reverse transcriptase in complex with a polypurine tract RNA: DNA. EMBO J. 20:1449-1461.
-
(2001)
EMBO J
, vol.20
, pp. 1449-1461
-
-
Sarafianos, S.G.1
Das, K.2
Tantillo, C.3
Clark Jr., A.D.4
Ding, J.5
Whitcomb, J.M.6
Boyer, P.L.7
Hughes, S.H.8
Arnold, E.9
-
26
-
-
0003529274
-
-
Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY
-
Sherman, F., G. R. Fink, and J. Hicks. 1986. Methods in yeast genetics. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
-
(1986)
Methods in yeast genetics
-
-
Sherman, F.1
Fink, G.R.2
Hicks, J.3
-
27
-
-
0034214101
-
Expression of an active form of recombinant Ty1 reverse transcriptase in Escherichia coli: A fusion protein containing the C-terminal region of the Ty1 integrase linked to the reverse transcriptase-RNase H domain exhibits polymerase and RNase H activities
-
Wilhelm, M., M. Boutabout, and F. X. Wilhelm. 2000. Expression of an active form of recombinant Ty1 reverse transcriptase in Escherichia coli: a fusion protein containing the C-terminal region of the Ty1 integrase linked to the reverse transcriptase-RNase H domain exhibits polymerase and RNase H activities. Biochem. J. 348:337-342.
-
(2000)
Biochem. J
, vol.348
, pp. 337-342
-
-
Wilhelm, M.1
Boutabout, M.2
Wilhelm, F.X.3
-
28
-
-
0035861567
-
Polypurine tract formation by Ty1 RNase H
-
Wilhelm, M., O. Uzun, E. H. Mules, A. Gabriel, and F. X. Wilhelm. 2001. Polypurine tract formation by Ty1 RNase H. J. Biol. Chem. 276:47695-47701.
-
(2001)
J. Biol. Chem
, vol.276
, pp. 47695-47701
-
-
Wilhelm, M.1
Uzun, O.2
Mules, E.H.3
Gabriel, A.4
Wilhelm, F.X.5
-
29
-
-
20444459090
-
Role of integrase in reverse transcription of the Saccharomyces cerevisiae retrotransposon Ty1
-
Wilhelm, M., and F. X. Wilhelm. 2005. Role of integrase in reverse transcription of the Saccharomyces cerevisiae retrotransposon Ty1. Eukaryot. Cell. 4:1057-1065.
-
(2005)
Eukaryot. Cell
, vol.4
, pp. 1057-1065
-
-
Wilhelm, M.1
Wilhelm, F.X.2
-
30
-
-
0025006614
-
Origin and evolution of retroelements based upon their reverse transcriptase sequences
-
Xiong, Y., and T. H. Eickbush. 1990. Origin and evolution of retroelements based upon their reverse transcriptase sequences. EMBO J. 9:3353-3362.
-
(1990)
EMBO J
, vol.9
, pp. 3353-3362
-
-
Xiong, Y.1
Eickbush, T.H.2
|