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In this article we use the zipper nomenclature for naming different arrangements of complexing monomers in the duplexes, n zipper is a descriptor of the arrangement of two nucleosides of interest, positioned in opposite strands of duplex. Number n indicates the distance, measured in base pairs, between the two nucleosides, and it has a positive value if one nucleoside is shifted relative to the other toward the 5′-end (of its own strand), or a negative value if the nucleoside is shifted toward the 3′-end. Hence, the two X monomers in the duplex 5′-d(GTG AXA TGC):3′-d(CAC TAX ACG) are positioned in a + 1 zipper.
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In this article we use the "zipper" nomenclature for naming different arrangements of complexing monomers in the duplexes, "n zipper" is a descriptor of the arrangement of two nucleosides of interest, positioned in opposite strands of duplex. Number n indicates the distance, measured in base pairs, between the two nucleosides, and it has a positive value if one nucleoside is shifted relative to the other toward the 5′-end (of its own strand), or a negative value if the nucleoside is shifted toward the 3′-end. Hence, the two X monomers in the duplex 5′-d(GTG AXA TGC):3′-d(CAC TAX ACG) are positioned in a "+ 1 zipper".
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