Discovering transcriptional regulatory regions in Drosophila by a nonalignment method for phylogenetic footprinting

Proceedings of the National Academy of Sciences of the United States of America

Volumn 104, Issue 15, 2007, Pages 6305-6310

  Sosinsky, Alona ^a   Honig, Barry ^a   Mann, Richard S ^a   Califano, Andrea ^a  

^a Och Spine at New York Presbyterian Hospitals   (United States)

Author keywords

Comparative genomics; Enhancer discovery; Prediction; Regulatory sequence; Regulatory sequence evolution; Transcription regulation

Indexed keywords

DNA; NONPROTEIN CODING DNA; TRANSCRIPTION FACTOR; UNCLASSIFIED DRUG;

ACCURACY; ALGORITHM; ANIMAL EXPERIMENT; ARTICLE; BINDING SITE; DNA FOOTPRINTING; DROSOPHILA; ENHANCER DETECTION USING ONLY GENOMIC INFORMATION; EVOLUTION; GENE SEQUENCE; GENOME; NONALIGNMENT METHOD; NONHUMAN; ORTHOLOGY; PERFORMANCE; PHYLOGENY; PREDICTION; PRIORITY JOURNAL; PROTEIN DNA BINDING; REGULATORY SEQUENCE; SEQUENCE ANALYSIS; TRANSCRIPTION REGULATION; UNTRANSLATED REGION;

ALGORITHMS; ANIMALS; DNA FOOTPRINTING; DROSOPHILA; ENHANCER ELEMENTS (GENETICS); EVALUATION STUDIES; GENOMICS; PHYLOGENY;

EUKARYOTA;

EID: 34547540506     PISSN: 00278424     EISSN: None     Source Type: Journal    
DOI: 10.1073/pnas.0701614104     Document Type: Article

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