-
1
-
-
77957192819
-
Efficient text fingerprinting via parikh mapping
-
To appear
-
Amir, A., Apostolico, A., Landau, G.M., and Satta, G. 2003. Efficient text fingerprinting via parikh mapping. J. Disc. Algorithms. To appear.
-
(2003)
J. Disc. Algorithms
-
-
Amir, A.1
Apostolico, A.2
Landau, G.M.3
Satta, G.4
-
2
-
-
34248344089
-
Parallel construction of a suffix tree with applications
-
Apostolico, A., Iliopoulos, C., Landau, G.M., Schieber, B., and Vishkin, U. 1988. Parallel construction of a suffix tree with applications. Algorithmica 3, 347-365.
-
(1988)
Algorithmica
, vol.3
, pp. 347-365
-
-
Apostolico, A.1
Iliopoulos, C.2
Landau, G.M.3
Schieber, B.4
Vishkin, U.5
-
3
-
-
0035678575
-
Multiple snoRNA gene clusters from arabidopsis
-
Brown, J.W.S., Clark, G.P., Leader, D.J., Simpson, C.G., and Lowe, T. 2001. Multiple snoRNA gene clusters from arabidopsis. RNA 7, 1817-1832.
-
(2001)
RNA
, vol.7
, pp. 1817-1832
-
-
Brown, J.W.S.1
Clark, G.P.2
Leader, D.J.3
Simpson, C.G.4
Lowe, T.5
-
5
-
-
0032169271
-
Conservation of gene order: A fingerprint of proteins that physically interact
-
Dandekar, T., Snel, B., Huynen, M., and Bork, P. 1998. Conservation of gene order: A fingerprint of proteins that physically interact. Trends Biochem. Sci. 23, 324-328.
-
(1998)
Trends Biochem. Sci.
, vol.23
, pp. 324-328
-
-
Dandekar, T.1
Snel, B.2
Huynen, M.3
Bork, P.4
-
6
-
-
0035071955
-
Olfactory receptor-gene clusters, genomic-inversion polymorphisms, and common chromosome rearrangements
-
Giglio, S., Broman, K.W., Matsumoto, N., Calvari, V., Gimelli, G., Neuman, T., Obashi, H., Voullaire, L., Larizza, D., Giorda, R., Weber, J.L., Ledbetter, D.H., and Zuffardi, O. 2001. Olfactory receptor-gene clusters, genomic-inversion polymorphisms, and common chromosome rearrangements. Am. J. Human Genet. 68(4), 874-883.
-
(2001)
Am. J. Human Genet.
, vol.68
, Issue.4
, pp. 874-883
-
-
Giglio, S.1
Broman, K.W.2
Matsumoto, N.3
Calvari, V.4
Gimelli, G.5
Neuman, T.6
Obashi, H.7
Voullaire, L.8
Larizza, D.9
Giorda, R.10
Weber, J.L.11
Ledbetter, D.H.12
Zuffardi, O.13
-
7
-
-
84956972433
-
Finding all common intervals of k permutations
-
Springer-Verlag
-
Heber, S., and Stoye, J. 2001. Finding all common intervals of k permutations. Proc. 12th on Comp. Pattern Matching, vol. 2809 of Lecture Notes in Computer Science, 207-218, Springer-Verlag.
-
(2001)
Proc. 12th on Comp. Pattern Matching, Vol. 2809 of Lecture Notes in Computer Science
, vol.2809
, pp. 207-218
-
-
Heber, S.1
Stoye, J.2
-
8
-
-
84976712224
-
Rapid identification of repeated patterns in strings, arrays and trees
-
Karp, R., Miller, R., and Rosenberg, A. 1972. Rapid identification of repeated patterns in strings, arrays and trees. Symposium on Theory of Computing 4, 125-136.
-
(1972)
Symposium on Theory of Computing
, vol.4
, pp. 125-136
-
-
Karp, R.1
Miller, R.2
Rosenberg, A.3
-
9
-
-
0347494058
-
Parallel suffix-prefix matching algorithm and application
-
Kedem, Z.M., Landau, G.M., and Palem, K.V. 1996. Parallel suffix-prefix matching algorithm and application. SIAM J. Comput. 25(5), 998-1023.
-
(1996)
SIAM J. Comput.
, vol.25
, Issue.5
, pp. 998-1023
-
-
Kedem, Z.M.1
Landau, G.M.2
Palem, K.V.3
-
10
-
-
0033945491
-
Tandem cluster of membrane proteins in complete genome sequences
-
Kihara, D., and Kanehisa, M. 2000. Tandem cluster of membrane proteins in complete genome sequences. Genome Res. 10, 731-743.
-
(2000)
Genome Res.
, vol.10
, pp. 731-743
-
-
Kihara, D.1
Kanehisa, M.2
-
11
-
-
0029847554
-
Selfish operons: Horizontal transfer may drive the evolution of gene clusters
-
Lawrence, J.G., and Roth, J.R. 1996. Selfish operons: Horizontal transfer may drive the evolution of gene clusters. Genetics 143, 1843-1860.
-
(1996)
Genetics
, vol.143
, pp. 1843-1860
-
-
Lawrence, J.G.1
Roth, J.R.2
-
12
-
-
0033618555
-
Detecting protein function and protein-protein interactions
-
Marcott, E.M., Pellegrini, M., Ng, H.L., Rice, D.W., Yeates, T.O., and Eisenberg, D. 1999. Detecting protein function and protein-protein interactions. Science 285, 751-753.
-
(1999)
Science
, vol.285
, pp. 751-753
-
-
Marcott, E.M.1
Pellegrini, M.2
Ng, H.L.3
Rice, D.W.4
Yeates, T.O.5
Eisenberg, D.6
-
13
-
-
0035749615
-
Extraction of correlated gene clusters by multiple graph comparison
-
Nakaya, A., Goto, S., and Kanehisa, M. 2001. Extraction of correlated gene clusters by multiple graph comparison. Genome Informatics 12, 44-53.
-
(2001)
Genome Informatics
, vol.12
, pp. 44-53
-
-
Nakaya, A.1
Goto, S.2
Kanehisa, M.3
-
14
-
-
0034667776
-
A heuristic graph comparison algorithm and its application to detect functionally related enzyme clusters
-
Ogata, H., Fujibuchi, W., and Goto, S. 2000. A heuristic graph comparison algorithm and its application to detect functionally related enzyme clusters. Nucl. Acids Res. 28, 4021-4028.
-
(2000)
Nucl. Acids Res.
, vol.28
, pp. 4021-4028
-
-
Ogata, H.1
Fujibuchi, W.2
Goto, S.3
-
15
-
-
0033055062
-
The use of gene clusters to infer functional coupling
-
Overbeek, R., Fonstein, M., Dsouza, M., Pusch, G.D., and Maltsev, N. 1999. The use of gene clusters to infer functional coupling. Proc. Natl. Acad. Sci. USA 96(6), 2896-2901.
-
(1999)
Proc. Natl. Acad. Sci. USA
, vol.96
, Issue.6
, pp. 2896-2901
-
-
Overbeek, R.1
Fonstein, M.2
Dsouza, M.3
Pusch, G.D.4
Maltsev, N.5
-
17
-
-
35248867070
-
A combinatorial approach to automatic discovery of cluster-patterns
-
Springer-Verlag
-
Parida, L., Eres, R., and Landau, G. 2003. A combinatorial approach to automatic discovery of cluster-patterns. Proc. 3rd Workshop on Algorithms in Bioinformatics, vol. 2812 of Lecture Notes in Bioinformatics, 139-150, Springer-Verlag.
-
(2003)
Proc. 3rd Workshop on Algorithms in Bioinformatics, Vol. 2812 of Lecture Notes in Bioinformatics
, vol.2812
, pp. 139-150
-
-
Parida, L.1
Eres, R.2
Landau, G.3
-
18
-
-
35048821961
-
Quadratic time algorithms for finding common intervals in two and more sequences
-
Schmidt, T., and Stoye, J. 2004. Quadratic time algorithms for finding common intervals in two and more sequences. Proc. of the 15th Symp. on Comp. Pattern Matching 174, 347-358.
-
(2004)
Proc. of the 15th Symp. on Comp. Pattern Matching
, vol.174
, pp. 347-358
-
-
Schmidt, T.1
Stoye, J.2
-
19
-
-
0030732137
-
Conserved gene clusters in bacterial genomes provide further support for the primacy of RNA
-
Siefert, J.L., Martin, K.A., Abdi, F., Widger, W.R., and Fox, G.E. 1997. Conserved gene clusters in bacterial genomes provide further support for the primacy of RNA. J. Mol. Evol. 45, 467-472.
-
(1997)
J. Mol. Evol.
, vol.45
, pp. 467-472
-
-
Siefert, J.L.1
Martin, K.A.2
Abdi, F.3
Widger, W.R.4
Fox, G.E.5
-
20
-
-
0034666108
-
A web-server to retrieve and display repeatedly occurring neighbourhood of a gene
-
Snel, B., Lehmann, G., Bork, P., and Huynen, M.A. 2000. A web-server to retrieve and display repeatedly occurring neighbourhood of a gene. Nucl. Acids Res. 28(18), 3443-3444.
-
(2000)
Nucl. Acids Res.
, vol.28
, Issue.18
, pp. 3443-3444
-
-
Snel, B.1
Lehmann, G.2
Bork, P.3
Huynen, M.A.4
-
21
-
-
0031024670
-
Conserved clusters of functionally related genes in two bacterial genomes
-
Tamames, J., Casari, G., Ouzounis, C., and Valencia, A. 1997. Conserved clusters of functionally related genes in two bacterial genomes. J. Mol. Evol. 44, 66-73.
-
(1997)
J. Mol. Evol.
, vol.44
, pp. 66-73
-
-
Tamames, J.1
Casari, G.2
Ouzounis, C.3
Valencia, A.4
-
22
-
-
0031753606
-
A comparative analysis of ABC transporters in complete microbial genomes
-
Tomii, K., and Kanehisa, M. 1998. A comparative analysis of ABC transporters in complete microbial genomes. Genome Res. 8, 1048-1059.
-
(1998)
Genome Res.
, vol.8
, pp. 1048-1059
-
-
Tomii, K.1
Kanehisa, M.2
-
23
-
-
0031035094
-
Genome plasticity as a paradigm of eubacteria evolution
-
Watanabe, H., Mori, H., Itoh, T., and Gojobori, T. 1997. Genome plasticity as a paradigm of eubacteria evolution. J. Mol. Evol. 44, S57-S64.
-
(1997)
J. Mol. Evol.
, vol.44
-
-
Watanabe, H.1
Mori, H.2
Itoh, T.3
Gojobori, T.4
|