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Volumn 1, Issue 4, 2007, Pages 238-246

Dynamical robustness of biological networks with hierarchical distribution of time scales

Author keywords

A8710; A8715P; Biochemistry; Biological networks; chemical reaction; Dynamical robustness; Genetic networks; Genetics; Hierarchical time scale distribution; Linear networks; Molecular biology; Molecular biophysics; Physiological models; R robustness; Relaxation time; Signalling networks; Stability; Stability phenomena; Transcription factor NF B

Indexed keywords

BIOCHEMISTRY; BIOPHYSICS; GENETIC ALGORITHMS; MATHEMATICAL MODELS; NEURAL NETWORKS; PHYSIOLOGICAL MODELS; RELAXATION TIME; ROBUSTNESS (CONTROL SYSTEMS); SYSTEM STABILITY;

EID: 34547138406     PISSN: 17518849     EISSN: None     Source Type: Journal    
DOI: 10.1049/iet-syb:20060083     Document Type: Article
Times cited : (20)

References (37)
  • 1
    • 0004078878 scopus 로고
    • 'The strategy of genes'
    • (Allen and Unwin, London)
    • Waddington, C.H.: 'The strategy of genes', (Allen and Unwin, London 1957)
    • (1957)
    • Waddington, C.H.1
  • 2
    • 0003721896 scopus 로고
    • 'Structural stability and morphogenesis'
    • (Benjamin, New York)
    • Thom, R.: 'Structural stability and morphogenesis', (Benjamin, New York 1975)
    • (1975)
    • Thom, R.1
  • 3
    • 34547130685 scopus 로고    scopus 로고
    • 'Robustesse de la dynamique des systèmes discrets: Le cas de l'asynchronisme dans les automates cellulaires'
    • PhD, ENS Lyon
    • Fates, N.: 'Robustesse de la dynamique des systèmes discrets: le cas de l'asynchronisme dans les automates cellulaires', 2004, PhD, ENS Lyon
    • (2004)
    • Fates, N.1
  • 4
    • 18844380444 scopus 로고    scopus 로고
    • 'Robustness and fragility of Boolean models for genetic regulatory'
    • Chaves, J.M., Albert, R., and Sontag, E.D.: 'Robustness and fragility of Boolean models for genetic regulatory', J Theor. Biol., 2005, 235, p. 431-449
    • (2005) J Theor. Biol. , vol.235 , pp. 431-449
    • Chaves, J.M.1    Albert, R.2    Sontag, E.D.3
  • 5
  • 7
    • 7644238181 scopus 로고    scopus 로고
    • 'Biological robustness'
    • Kitano, H.: 'Biological robustness', Nat. Rev., 2004, 5, p. 826-837
    • (2004) Nat. Rev. , vol.5 , pp. 826-837
    • Kitano, H.1
  • 8
    • 34547120576 scopus 로고
    • 'Probabilistic logics and the synthesis of reliable organisms from unreliable components'
    • (Pergamon Press, Oxford) von Neumann
    • von Neumann, J.: 'Probabilistic logics and the synthesis of reliable organisms from unreliable components', von Neumann, J. Collected Works', (Pergamon Press, Oxford 1963), 5),
    • (1963) J. Collected Works' , vol.5
    • von Neumann, J.1
  • 10
    • 14344263352 scopus 로고    scopus 로고
    • 'Distributed robustness versus redundancy as causes of mutational robustness'
    • Wagner, A.: 'Distributed robustness versus redundancy as causes of mutational robustness', BioEssays, 2005, 27, p. 176-188
    • (2005) BioEssays , vol.27 , pp. 176-188
    • Wagner, A.1
  • 11
    • 33748352373 scopus 로고    scopus 로고
    • 'Multiple knockout analysis of genetic robustness in the yeast metabolic network'
    • Deutscher, D., Meilijson, I., Kupiec, M., and Ruppin, E.: 'Multiple knockout analysis of genetic robustness in the yeast metabolic network', Nat. Genetics, 2006, 9, p. 993-998
    • (2006) Nat. Genetics , vol.9 , pp. 993-998
    • Deutscher, D.1    Meilijson, I.2    Kupiec, M.3    Ruppin, E.4
  • 12
    • 0037075022 scopus 로고    scopus 로고
    • 'Establishment of developmenal precision and proportions in the early Drosophila embryo'
    • 0028-0836
    • Houchmanzadeh, B., Wieschaus, E., and Leibler, S.: 'Establishment of developmenal precision and proportions in the early Drosophila embryo', Nature, 2002, 415, p. 798-802 0028-0836
    • (2002) Nature , vol.415 , pp. 798-802
    • Houchmanzadeh, B.1    Wieschaus, E.2    Leibler, S.3
  • 13
    • 33644840046 scopus 로고    scopus 로고
    • 'Genetic susceptibility to coronary artery disease: From promise to progress'
    • Watkins, H., and Farrall, M.: 'Genetic susceptibility to coronary artery disease: From promise to progress', Nat. Rev. Genetics, 2006, 7, p. 163-173
    • (2006) Nat. Rev. Genetics , vol.7 , pp. 163-173
    • Watkins, H.1    Farrall, M.2
  • 15
    • 84984765621 scopus 로고    scopus 로고
    • 'Canalization of development by microRNAs'
    • Hornstein, E., and Shomron, N.: 'Canalization of development by microRNAs', Nat. Genetics, 2006, 38, p. S20-S24
    • (2006) Nat. Genetics , vol.38
    • Hornstein, E.1    Shomron, N.2
  • 16
    • 0034644270 scopus 로고    scopus 로고
    • 'The segment polarity network is a robust developmental module'
    • 0028-0836
    • von Dassow, G., Meir, E., Munro, E.M., and Odell, G.M.: 'The segment polarity network is a robust developmental module', Nature, 2000, 406, p. 188-192 0028-0836
    • (2000) Nature , vol.406 , pp. 188-192
    • von Dassow, G.1    Meir, E.2    Munro, E.M.3    Odell, G.M.4
  • 17
    • 0003906294 scopus 로고
    • 'Nonparametrics'
    • (Holden-Day, San Francisco)
    • Lehmann, E.L.: 'Nonparametrics', (Holden-Day, San Francisco 1975)
    • (1975)
    • Lehmann, E.L.1
  • 18
    • 51249165477 scopus 로고
    • 'Concentration of measure and isoperimetric inequalities in product spaces'
    • Talagrand, M.: 'Concentration of measure and isoperimetric inequalities in product spaces', Ins. Hautes. Etudes. Sci. Publ. Math., 1995, 81, p. 73-205
    • (1995) Ins. Hautes. Etudes. Sci. Publ. Math. , vol.81 , pp. 73-205
    • Talagrand, M.1
  • 19
    • 0004076870 scopus 로고    scopus 로고
    • 'Metric structures for Riemannian and non-Riemannian spaces, Progr. Math. 152'
    • Birkhauser, Boston
    • Gromov, M.: 'Metric structures for Riemannian and non-Riemannian spaces, Progr. Math. 152', Birkhauser, Boston
    • Gromov, M.1
  • 20
    • 0342400115 scopus 로고
    • 'Essays on chemical relaxation'
    • (Nauka, Novosibirsk)
    • Gorban, A.N., Bykov, V.I., and Yablonskii, G.S.: 'Essays on chemical relaxation', (Nauka, Novosibirsk 1986)
    • (1986)
    • Gorban, A.N.1    Bykov, V.I.2    Yablonskii, G.S.3
  • 21
    • 0003944838 scopus 로고
    • 'Finite Markov processes and their applications'
    • (Wiley and Sons, New York
    • Iosifescu, M.: 'Finite Markov processes and their applications', (Wiley and Sons, New York, 1980
    • (1980)
    • Iosifescu, M.1
  • 22
    • 34547117474 scopus 로고    scopus 로고
    • 'Dynamic and static limitation in reaction networks'
    • revisited, arXiv:physics/0703278
    • Gorban, A.N., and Radulescu, O.: 'Dynamic and static limitation in reaction networks', revisited, arXiv:pHysics/0703278
    • Gorban, A.N.1    Radulescu, O.2
  • 23
    • 0037044575 scopus 로고    scopus 로고
    • 'The IκB-NF-κB signalling module: Temporal control and selective gene activation'
    • 0036-8075
    • Hoffmann, A., Levchenko, A., Scott, M.L., and Baltimore, D.: 'The IκB-NF-κB signalling module: Temporal control and selective gene activation', Science, 2002, 298, p. 1241-1245 0036-8075
    • (2002) Science , vol.298 , pp. 1241-1245
    • Hoffmann, A.1    Levchenko, A.2    Scott, M.L.3    Baltimore, D.4
  • 25
    • 7444254365 scopus 로고    scopus 로고
    • 'Oscillations in NF-κB signalling control the dynamics of gene expression'
    • 0036-8075
    • Nelson, D.E., Ihekwaba, A.E.C., Elliot, M., Johnson, J.R., Gibney, C.A., and Foreman, B.E.: Et al. 'Oscillations in NF-κB signalling control the dynamics of gene expression', Science, 2004, 306, p. 704-708 0036-8075
    • (2004) Science , vol.306 , pp. 704-708
    • Nelson, D.E.1    Ihekwaba, A.E.C.2    Elliot, M.3    Johnson, J.R.4    Gibney, C.A.5    Foreman, B.E.6
  • 26
    • 17644427530 scopus 로고    scopus 로고
    • 'Sensitivity analysis of parameters controlling oscillatory signaling in the NF-κB pathway: The roles of IKK and IκBα'
    • 10.1049/sb:20045009
    • Ihekwaba, A.E.C., Broomhead, D.S., Grimley, R.L., Benson, N., and Kell, D.B.: 'Sensitivity analysis of parameters controlling oscillatory signaling in the NF-κB pathway: The roles of IKK and IκBα', Syst. Biol., 2004, 1, p. 93-102 10.1049/sb:20045009
    • (2004) Syst. Biol. , vol.1 , pp. 93-102
    • Ihekwaba, A.E.C.1    Broomhead, D.S.2    Grimley, R.L.3    Benson, N.4    Kell, D.B.5
  • 27
    • 1342345844 scopus 로고    scopus 로고
    • 'Can complex structures be generically stable in a noisy world?'
    • 0018-8646
    • Grinstein, G.: 'Can complex structures be generically stable in a noisy world?', IBM J. Res. Dev., 2004, 48, p. 5-12 0018-8646
    • (2004) IBM J. Res. Dev. , vol.48 , pp. 5-12
    • Grinstein, G.1
  • 29
    • 2942542735 scopus 로고    scopus 로고
    • 'Three-parameter lognormal distribution ubiquitously found in cDNA microarray data and its application to parametric data treatement'
    • Konishi, T.: 'Three-parameter lognormal distribution ubiquitously found in cDNA microarray data and its application to parametric data treatement', BMC Bioinform., 2004, 5
    • (2004) BMC Bioinform. , pp. 5
    • Konishi, T.1
  • 30
    • 25844433114 scopus 로고    scopus 로고
    • 'Gene expression profiling in single cells from the pancreatic islets of Langerhans reveals lognormal distribution of mRNA levels'
    • Begtson, M., Stahlberg, A., Rorsman, P., and Kubista, M.: 'Gene expression profiling in single cells from the pancreatic islets of Langerhans reveals lognormal distribution of mRNA levels ', Genome Res., 2005, 15, p. 1388-1392
    • (2005) Genome Res. , vol.15 , pp. 1388-1392
    • Begtson, M.1    Stahlberg, A.2    Rorsman, P.3    Kubista, M.4
  • 31
    • 33644897539 scopus 로고    scopus 로고
    • 'Ubiquity of log-normal distributions in intra-cellular reaction dynamics'
    • 0006-3509
    • Furusawa, C., Suzuki, T., Kashiwagi, A., Yomo, T., and Kaneko, K.: 'Ubiquity of log-normal distributions in intra-cellular reaction dynamics', Biophysics, 2005, 1, p. 25-31 0006-3509
    • (2005) Biophysics , vol.1 , pp. 25-31
    • Furusawa, C.1    Suzuki, T.2    Kashiwagi, A.3    Yomo, T.4    Kaneko, K.5
  • 32
    • 0034978467 scopus 로고    scopus 로고
    • 'Log-normal distributions across the sciences: Keys and clues'
    • Limpert, E., Stahel, W.A., and Abbt, M.: 'Log-normal distributions across the sciences: Keys and clues', BioScience, 2001, 51, p. 341-352
    • (2001) BioScience , vol.51 , pp. 341-352
    • Limpert, E.1    Stahel, W.A.2    Abbt, M.3
  • 33
    • 0030545965 scopus 로고    scopus 로고
    • 'On orthogonal and symplectic matrix ensembles'
    • 10.1007/BF02099545 0010-3616
    • Tracy, C.A., and Widom, H.: 'On orthogonal and symplectic matrix ensembles', Commun. Math. Phys., 1996, 177, p. 727-754 10.1007/ BF02099545 0010-3616
    • (1996) Commun. Math. Phys. , vol.177 , pp. 727-754
    • Tracy, C.A.1    Widom, H.2
  • 34
    • 0141450345 scopus 로고    scopus 로고
    • 'A note on universality of the distribution of the largest eigenvalues'
    • 10.1023/A:1019739414239 0022-4715
    • Soshnikov, A.: 'A note on universality of the distribution of the largest eigenvalues', J. Stat. Phys., 2002, 108, p. 1033-1056 10.1023/ A:1019739414239 0022-4715
    • (2002) J. Stat. Phys. , vol.108 , pp. 1033-1056
    • Soshnikov, A.1
  • 35
    • 67349215153 scopus 로고    scopus 로고
    • 'Singularities of transition processes in dynamical systems'
    • Monograph 05
    • Gorban, A.N.: 'Singularities of transition processes in dynamical systems', Electronic J. Differential Equations, 2004, Monograph 05
    • (2004) Electronic J. Differential Equations
    • Gorban, A.N.1
  • 36
    • 30444453830 scopus 로고    scopus 로고
    • 'Uncovering the design principles of circadian clocks: Mathematical analysis of flexibility and evolutionary goals'
    • Rand, D.A., Shulgin, B.V., Salazar, J.D., and Millar, A.J.: 'Uncovering the design principles of circadian clocks: Mathematical analysis of flexibility and evolutionary goals', J. Theor. Biol., 2006, 238, p. 616-635
    • (2006) J. Theor. Biol. , vol.238 , pp. 616-635
    • Rand, D.A.1    Shulgin, B.V.2    Salazar, J.D.3    Millar, A.J.4


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