Identification of a minimal myosin Va binding site within an intrinsically unstructured domain of melanophilin

Journal of Biological Chemistry

Volumn 282, Issue 29, 2007, Pages 21518-21528

  Geething, Nathan C ^a   Spudich, James A ^a  

^a STANFORD UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

MELANOPHILIN; MELANOSOMES; MYOSIN; SECONDARY STRUCTURES; VESICLES;

BINDING SITES; CELL MEMBRANES; HYDRODYNAMICS; MUSCLE; NUCLEAR MAGNETIC RESONANCE; POLYPEPTIDES; PROTEOLYSIS; RNA;

PROTEINS;

GENE PRODUCT; MELANOPHILIN; MYOSIN VA; POLYPEPTIDE; UNCLASSIFIED DRUG;

AMINO ACID SEQUENCE; ARTICLE; BINDING AFFINITY; BINDING SITE; CELL MEMBRANE; CONTROLLED STUDY; MELANOSOME; MOUSE; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN BINDING; PROTEIN DEGRADATION; PROTEIN DOMAIN; PROTEIN FOLDING; PROTEIN FUNCTION; PROTEIN PURIFICATION; PROTEIN STRUCTURE; PROTON NUCLEAR MAGNETIC RESONANCE;

AMINO ACID SEQUENCE; ANIMALS; BINDING SITES; CARRIER PROTEINS; MAGNETIC RESONANCE SPECTROSCOPY; MELANOSOMES; MICE; MOLECULAR SEQUENCE DATA; MYOSIN HEAVY CHAINS; MYOSIN TYPE V; PROTEIN FOLDING; PROTEIN STRUCTURE, SECONDARY; PROTEIN STRUCTURE, TERTIARY; RAB GTP-BINDING PROTEINS; RECOMBINANT PROTEINS; SEQUENCE HOMOLOGY, AMINO ACID;

EID: 34547126025     PISSN: 00219258     EISSN: 1083351X     Source Type: Journal    
DOI: 10.1074/jbc.M701932200     Document Type: Article

References (46)

1. Provance, D. W., Jr., Wei, M., Ipe, V., and Mercer, J. A. (1996) Proc. Natl. Acad. Sci. U. S. A. 93, 14554-14558
2. Wei, Q., Wu, X., and Hammer, J. A., III (1997) J. Muscle Res. Cell Motil. 18, 517-527
3. Mercer, J. A., Seperack, P. K., Strobel, M. C., Copeland, N. G., and Jenkins, N. A. (1991) Nature 349, 709-713
4. Huang, J. D., Mermall, V., Strobel, M. C., Russell, L. B., Mooseker, M. S., Copeland, N. G., and Jenkins, N. A. (1998) Genetics 148, 1963-1972
5. Huang, J. D., Cope, M. J., Mermall, V., Strobel, M. C., Kendrick-Jones, J., Russell, L. B., Mooseker, M. S., Copeland, N. G., and Jenkins, N. A. (1998) Genetics 148, 1951-1961
6. Kuroda, T. S., Ariga, H., and Fukuda, M. (2003) Mol. Cell. Biol. 23, 5245-5255
7. Strom, M., Hume, A. N., Tarafder, A. K., Barkagianni, E., and Seabra, M. C. (2002) J. Biol. Chem. 277, 25423-25430
8. Wu, X. S., Tsan, G. L., and Hammer, J. A., III (2005) J. Cell Biol. 171, 201-207
9. Fukuda, M., and Kuroda, T. S. (2004) J. Cell Sci. 117, 583-591
10. Wu, X., Wang, F., Rao, K., Sellers, J. R., and Hammer, J. A., III (2002) Mol. Biol. Cell 13, 1735-1749
11. Wu, X. S., Rao, K., Zhang, H., Wang, F., Sellers, J. R., Matesic, L. E., Copeland, N. G., Jenkins, N. A., and Hammer, J. A., III (2002) Nat. Cell Biol. 4, 271-278
12. Hume, A. N., Tarafder, A. K., Ramalho, J. S., Sviderskaya, E. V., and Seabra, M. C. (2006) Mol. Biol. Cell 17, 4720-4735
13. Krementsov, D. N., Krementsova, E. B., and Trybus, K. M. (2004) J. Cell Biol. 164, 877-886
14. Li, X. D., Ikebe, R., and Ikebe, M. (2005) J. Biol. Chem. 280, 17815-17822
15. Fukuda, M., and Itoh, T. (2004) J. Biol. Chem. 279, 22314-22321
16. Wright, P. E., and Dyson, H. J. (1999) J. Mol. Biol. 293, 321-331
17. Dyson, H. J., and Wright, P. E. (2005) Nature reviews 6, 197-208
18. Uversky, V. N. (2002) Protein Sci. 11, 739-756
19. Dosztanyi, Z., Chen, J., Dunker, A. K., Simon, I., and Tompa, P. (2006) J. Proteome Res. 5, 2985-2995
20. Ward, J. J., Sodhi, J. S., McGuffin, L. J., Buxton, B. F., and Jones, D. T. (2004) J. Mol. Biol. 337, 635-645
21. Cheng, Y., LeGall, T., Oldfield, C. J., Dunker, A. K., and Uversky, V. N. (2006) Biochemistry 45, 10448-10460
22. Iakoucheva, L. M., Brown, C. J., Lawson, J. D., Obradovic, Z., and Dunker, A. K. (2002) J. Mol. Biol. 323, 573-584
23. Kapust, R. B., Tozser, J., Fox, J. D., Anderson, D. E., Cherry, S., Copeland, T. D., and Waugh, D. S. (2001) Protein Eng. 14, 993-1000
24. Smallcombe, S. H., Patt, S. L., and Keifer, P. A. (1995) J. Magn. Reson. A 117, 295-303
25. Li, X., Romero, P., Rani, M., Dunker, A. K., and Obradovic, Z. (1999) Genome Inform. Ser. Workshop Genome Inform. 10, 30-40
26. Romero, P., Obradovic, Z., Li, X., Garner, E. C., Brown, C. J., and Dunker, A. K. (2001) Proteins 42, 38-48
27. Ostermeier, C., and Brunger, A. T. (1999) Cell 96, 363-374
28. Shi, Z., Chen, K., Liu, Z., and Kallenbach, N. R. (2006) Chem. Rev. 106, 1877-1897
29. Syme, C. D., Blanch, E. W., Holt, C., Jakes, R., Goedert, M., Hecht, L., and Barron, L. D. (2002) Eur. J. Biochem. 269, 148-156
30. Gill, A. C., Ritchie, M. A., Hunt, L. G., Steane, S. E., Davies, K. G., Bocking, S. P., Rhie, A. G., Bennett, A. D., and Hope, J. (2000) EMBO J. 19, 5324-5331
31. Rost, B., and Liu, J. (2003) Nucleic Acids Res. 31, 3300-3304
32. Cuff, J. A., Clamp, M. E., Siddiqui, A. S., Finlay, M., and Barton, G. J. (1998) Bioinformatics 14, 892-893
33. Demarest, S. J., Martinez-Yamout, M., Chung, J., Chen, H., Xu, W., Dyson, H. J., Evans, R. M., and Wright, P. E. (2002) Nature 415, 549-553
34. Cheney, R. E., O'Shea, M. K., Heuser, J. E., Coelho, M. V., Wolenski, J. S., Espreafico, E. M., Forscher, P., Larson, R. E., and Mooseker, M. S. (1993) Cell 75, 13-23
35. Hollenbeck, P. J. (1989) J. Cell Biol. 108, 2335-2342
36. Tanford, C., Kawahara, K., and Lapanje, S. (1966) J. Biol. Chem. 241, 1921-1923
37. Dill, K. A., and Shortle, D. (1991) Annu. Rev. Biochem. 60, 795-825
38. Baldwin, R. L., and Zimm, B. H. (2000) Proc. Natl. Acad. Sci. U. S. A. 97, 12391-12392
39. Sivakolundu, S. G., Bashford, D., and Kriwacki, R. W. (2005) J. Mol. Biol. 353, 1118-1128
40. Benison, G., Nyarko, A., and Barbar, E. (2006) J. Mol. Biol. 362, 1082-1093
41. Lee, H., Mok, K. H., Muhandiram, R., Park, K. H., Suk, J. E., Kim, D. H., Chang, J., Sung, Y. C., Choi, K. Y., and Han, K. H. (2000) J. Biol. Chem. 275, 29426-29432
42. Lacy, E. R., Filippov, I., Lewis, W. S., Otieno, S., Xiao, L., Weiss, S., Hengst, L., and Kriwacki, R. W. (2004) Nat. Struct. Mol. Biol. 11, 358-364
43. Oldfield, C. J., Cheng, Y., Cortese, M. S., Romero, P., Uversky, V. N., and Dunker, A. K. (2005) Biochemistry 44, 12454-12470
44. Mohan, A., Oldfield, C. J., Radivojac, P., Vacic, V., Cortese, M. S., Dunker, A. K., and Uversky, V. N. (2006) J. Mol. Biol. 362, 1043-1059
45. Tang, F., Kauffman, E. J., Novak, J. L., Nau, J. J., Catlett, N. L., and Weisman, L. S. (2003) Nature 422, 87-92
46. Spolar, R. S., and Record, M. T., Jr. (1994) Science 263, 777-784