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Volumn 274, Issue 14, 2007, Pages 3622-3632

The loss of tryptophan 194 in antichymotrypsin lowers the kinetic barrier to misfolding

Author keywords

Antichymotrypsin; Protein aggregation; Protein misfolding; Serpin; Stability

Indexed keywords

CHYMOTRYPSIN; CHYMOTRYPSIN INHIBITOR; PHENYLALANINE; SERINE PROTEINASE INHIBITOR; TRYPTOPHAN;

EID: 34447312857     PISSN: 1742464X     EISSN: 17424658     Source Type: Journal    
DOI: 10.1111/j.1742-4658.2007.05897.x     Document Type: Article
Times cited : (9)

References (33)
  • 1
    • 3042617720 scopus 로고    scopus 로고
    • How do proteins avoid becoming too stable? Biophysical studies into metastable proteins
    • Cabrita LD Bottomley SP (2004) How do proteins avoid becoming too stable? Biophysical studies into metastable proteins. Eur Biophys J 33, 83 88.
    • (2004) Eur Biophys J , vol.33 , pp. 83-88
    • Cabrita, L.D.1    Bottomley, S.P.2
  • 2
    • 0034687422 scopus 로고    scopus 로고
    • Structure of a serpin-protease complex shows inhibition by deformation
    • Huntington JA, Read RJ Carrell RW (2000) Structure of a serpin-protease complex shows inhibition by deformation. Nature 407, 923 926.
    • (2000) Nature , vol.407 , pp. 923-926
    • Huntington, J.A.1    Read, R.J.2    Carrell, R.W.3
  • 3
    • 0033608984 scopus 로고    scopus 로고
    • Formation of the covalent serpin-proteinase complex involves translocation of the proteinase by more than 70 a and full insertion of the reactive center loop into beta-sheet a
    • Stratikos E Gettins PG (1999) Formation of the covalent serpin-proteinase complex involves translocation of the proteinase by more than 70 A and full insertion of the reactive center loop into beta-sheet A. Proc Natl Acad Sci USA 96, 4808 4813.
    • (1999) Proc Natl Acad Sci USA , vol.96 , pp. 4808-4813
    • Stratikos, E.1    Gettins, P.G.2
  • 4
    • 0035815470 scopus 로고    scopus 로고
    • Intrinsic fluorescence changes and rapid kinetics of proteinase deformation during serpin inhibition
    • Tew DJ Bottomley SP (2001) Intrinsic fluorescence changes and rapid kinetics of proteinase deformation during serpin inhibition. FEBS Lett 494, 30 33.
    • (2001) FEBS Lett , vol.494 , pp. 30-33
    • Tew, D.J.1    Bottomley, S.P.2
  • 5
    • 0023700976 scopus 로고
    • Plasma serine proteinase inhibitors (serpins) exhibit major conformational changes and a large increase in conformational stability upon cleavage at their reactive sites
    • Bruch M, Weiss V Engel J (1988) Plasma serine proteinase inhibitors (serpins) exhibit major conformational changes and a large increase in conformational stability upon cleavage at their reactive sites. J Biol Chem 263, 16626 16630.
    • (1988) J Biol Chem , vol.263 , pp. 16626-16630
    • Bruch, M.1    Weiss, V.2    Engel, J.3
  • 6
    • 1442326004 scopus 로고    scopus 로고
    • Promiscuous beta-strand interactions and the conformational diseases
    • Chow MK, Lomas DA Bottomley SP (2004) Promiscuous beta-strand interactions and the conformational diseases. Curr Med Chem 11, 491 499.
    • (2004) Curr Med Chem , vol.11 , pp. 491-499
    • Chow, M.K.1    Lomas, D.A.2    Bottomley, S.P.3
  • 7
    • 0028773279 scopus 로고
    • Biological implications of a 3 a structure of dimeric antithrombin
    • Carrell RW, Stein PE, Fermi G Wardell MR (1994) Biological implications of a 3 A structure of dimeric antithrombin. Structure 2, 257 270.
    • (1994) Structure , vol.2 , pp. 257-270
    • Carrell, R.W.1    Stein, P.E.2    Fermi, G.3    Wardell, M.R.4
  • 9
    • 0034721790 scopus 로고    scopus 로고
    • Pathogenic alpha 1-antitrypsin polymers are formed by reactive loop-beta-sheet a linkage
    • Sivasothy P, Dafforn TR, Gettins PG Lomas DA (2000) Pathogenic alpha 1-antitrypsin polymers are formed by reactive loop-beta-sheet A linkage. J Biol Chem 275, 33663 33668.
    • (2000) J Biol Chem , vol.275 , pp. 33663-33668
    • Sivasothy, P.1    Dafforn, T.R.2    Gettins, P.G.3    Lomas, D.A.4
  • 10
    • 0029589824 scopus 로고
    • What do dysfunctional serpins tell us about molecular mobility and disease?
    • Stein PE Carrell RW (1995) What do dysfunctional serpins tell us about molecular mobility and disease? Nat Struct Biol 2, 96 113.
    • (1995) Nat Struct Biol , vol.2 , pp. 96-113
    • Stein, P.E.1    Carrell, R.W.2
  • 11
    • 0034283174 scopus 로고    scopus 로고
    • Conformational changes in serpins. II. the mechanism of activation of antithrombin by heparin
    • Whisstock JC, Pike RN, Jin L, Skinner R, Pei XY, Carrell RW Lesk AM (2000) Conformational changes in serpins. II. The mechanism of activation of antithrombin by heparin. J Mol Biol 301, 1287 1305.
    • (2000) J Mol Biol , vol.301 , pp. 1287-1305
    • Whisstock, J.C.1    Pike, R.N.2    Jin, L.3    Skinner, R.4    Pei, X.Y.5    Carrell, R.W.6    Lesk, A.M.7
  • 12
    • 0034523345 scopus 로고    scopus 로고
    • Phylogeny of the serpin superfamily: Implications of patterns of amino acid conservation for structure and function
    • Irving JA, Pike RN, Lesk AM Whisstock JC (2000) Phylogeny of the serpin superfamily: implications of patterns of amino acid conservation for structure and function. Genome Res 10, 1845 1864.
    • (2000) Genome Res , vol.10 , pp. 1845-1864
    • Irving, J.A.1    Pike, R.N.2    Lesk, A.M.3    Whisstock, J.C.4
  • 13
    • 0142095053 scopus 로고    scopus 로고
    • Mutation of the highly conserved tryptophan in the serpin breach region alters the inhibitory mechanism of plasminogen activator inhibitor-1
    • Blouse GE, Perron MJ, Kvassman JO, Yunus S, Thompson JH, Betts RL, Lutter LC Shore JD (2003) Mutation of the highly conserved tryptophan in the serpin breach region alters the inhibitory mechanism of plasminogen activator inhibitor-1. Biochemistry 42, 12260 12272.
    • (2003) Biochemistry , vol.42 , pp. 12260-12272
    • Blouse, G.E.1    Perron, M.J.2    Kvassman, J.O.3    Yunus, S.4    Thompson, J.H.5    Betts, R.L.6    Lutter, L.C.7    Shore, J.D.8
  • 14
    • 0032483354 scopus 로고    scopus 로고
    • Deconvolution of the fluorescence emission spectrum of human antithrombin and identification of the tryptophan residues that are responsive to heparin binding
    • Meagher JL, Beechem JM, Olson ST Gettins PG (1998) Deconvolution of the fluorescence emission spectrum of human antithrombin and identification of the tryptophan residues that are responsive to heparin binding. J Biol Chem 273, 23283 23289.
    • (1998) J Biol Chem , vol.273 , pp. 23283-23289
    • Meagher, J.L.1    Beechem, J.M.2    Olson, S.T.3    Gettins, P.G.4
  • 15
    • 0035834481 scopus 로고    scopus 로고
    • Probing the equilibrium denaturation of the serpin alpha(1)-antitrypsin with single tryptophan mutants; Evidence for structure in the urea unfolded state
    • Tew DJ Bottomley SP (2001) Probing the equilibrium denaturation of the serpin alpha(1)-antitrypsin with single tryptophan mutants; evidence for structure in the urea unfolded state. J Mol Biol 313, 1161 1169.
    • (2001) J Mol Biol , vol.313 , pp. 1161-1169
    • Tew, D.J.1    Bottomley, S.P.2
  • 16
    • 0034695402 scopus 로고    scopus 로고
    • Conformational changes in serpins. I. the native and cleaved conformations of alpha(1)-antitrypsin
    • Whisstock JC, Skinner R, Carrell RW Lesk AM (2000) Conformational changes in serpins. I. The native and cleaved conformations of alpha(1)-antitrypsin. J Mol Biol 295, 651 665.
    • (2000) J Mol Biol , vol.295 , pp. 651-665
    • Whisstock, J.C.1    Skinner, R.2    Carrell, R.W.3    Lesk, A.M.4
  • 17
    • 5144224143 scopus 로고    scopus 로고
    • Identification of residual structure within denatured antichymotrypsin: Implications for serpin folding and misfolding
    • Pearce MC, Cabrita LD, Rubin H, Gore MG Bottomley SP (2004) Identification of residual structure within denatured antichymotrypsin: implications for serpin folding and misfolding. Biochem Biophys Res Commun 324, 729 735.
    • (2004) Biochem Biophys Res Commun , vol.324 , pp. 729-735
    • Pearce, M.C.1    Cabrita, L.D.2    Rubin, H.3    Gore, M.G.4    Bottomley, S.P.5
  • 18
    • 0013800421 scopus 로고
    • The interaction of a naphthalene dye with apomyoglobin and apohemoglobin. a fluorescent probe of non-polar binding sites
    • Stryer L (1965) The interaction of a naphthalene dye with apomyoglobin and apohemoglobin. A fluorescent probe of non-polar binding sites. J Mol Biol 13, 482 495.
    • (1965) J Mol Biol , vol.13 , pp. 482-495
    • Stryer, L.1
  • 19
    • 0034665989 scopus 로고    scopus 로고
    • Conformational change and intermediates in the unfolding of alpha1-antichymotrypsin
    • Pearce MC, Rubin H Bottomley SP (2000) Conformational change and intermediates in the unfolding of alpha1-antichymotrypsin. J Biol Chem 275, 28513 28518.
    • (2000) J Biol Chem , vol.275 , pp. 28513-28518
    • Pearce, M.C.1    Rubin, H.2    Bottomley, S.P.3
  • 21
    • 1542467586 scopus 로고    scopus 로고
    • The selective inhibition of serpin aggregation by the molecular chaperone, alpha-crystallin, indicates a nucleation-dependent specificity
    • Devlin GL, Carver JA Bottomley SP (2003) The selective inhibition of serpin aggregation by the molecular chaperone, alpha-crystallin, indicates a nucleation-dependent specificity. J Biol Chem 278, 48644 48650.
    • (2003) J Biol Chem , vol.278 , pp. 48644-48650
    • Devlin, G.L.1    Carver, J.A.2    Bottomley, S.P.3
  • 22
    • 0032529612 scopus 로고    scopus 로고
    • The mechanism of alpha1-antitrypsin polymerization probed by fluorescence spectroscopy
    • James EL Bottomley SP (1998) The mechanism of alpha1-antitrypsin polymerization probed by fluorescence spectroscopy. Arch Biochem Biophys 356, 296 300.
    • (1998) Arch Biochem Biophys , vol.356 , pp. 296-300
    • James, E.L.1    Bottomley, S.P.2
  • 23
    • 0036882160 scopus 로고    scopus 로고
    • Acid denaturation of alpha1-antitrypsin: Characterization of a novel mechanism of serpin polymerization
    • Devlin GL, Chow MK, Howlett GJ Bottomley SP (2002) Acid denaturation of alpha1-antitrypsin: characterization of a novel mechanism of serpin polymerization. J Mol Biol 324, 859 870.
    • (2002) J Mol Biol , vol.324 , pp. 859-870
    • Devlin, G.L.1    Chow, M.K.2    Howlett, G.J.3    Bottomley, S.P.4
  • 24
    • 0034969249 scopus 로고    scopus 로고
    • Prevention of polymerization of M and Z alpha1-antitrypsin (alpha1-AT) with trimethylamine N-oxide. Implications for the treatment of alpha1-at deficiency
    • Devlin GL, Parfrey H, Tew DJ, Lomas DA Bottomley SP (2001) Prevention of polymerization of M and Z alpha1-antitrypsin (alpha1-AT) with trimethylamine N-oxide. Implications for the treatment of alpha1-at deficiency. Am J Respir Cell Mol Biol 24, 727 732.
    • (2001) Am J Respir Cell Mol Biol , vol.24 , pp. 727-732
    • Devlin, G.L.1    Parfrey, H.2    Tew, D.J.3    Lomas, D.A.4    Bottomley, S.P.5
  • 25
    • 0026755363 scopus 로고
    • The mechanism of Z alpha1-antitrypsin accumulation in the liver
    • Lomas DA, Evans DL, Finch JT Carrell RW (1992) The mechanism of Z alpha1-antitrypsin accumulation in the liver. Nature 357, 605 607.
    • (1992) Nature , vol.357 , pp. 605-607
    • Lomas, D.A.1    Evans, D.L.2    Finch, J.T.3    Carrell, R.W.4
  • 26
    • 0028407364 scopus 로고
    • Crystal structure of an uncleaved serpin reveals the conformation of an inhibitory reactive loop
    • Wei A, Rubin H, Cooperman BS Christianson DW (1994) Crystal structure of an uncleaved serpin reveals the conformation of an inhibitory reactive loop. Nat Struct Biol 1, 251 258.
    • (1994) Nat Struct Biol , vol.1 , pp. 251-258
    • Wei, A.1    Rubin, H.2    Cooperman, B.S.3    Christianson, D.W.4
  • 29
    • 17744409446 scopus 로고    scopus 로고
    • Wild-type alpha1-antitrypsin is in the canonical inhibitory conformation
    • Elliott PR, Abrahams JP Lomas DA (1998) Wild-type alpha1-antitrypsin is in the canonical inhibitory conformation. J Mol Biol 275, 419 425.
    • (1998) J Mol Biol , vol.275 , pp. 419-425
    • Elliott, P.R.1    Abrahams, J.P.2    Lomas, D.A.3
  • 30
    • 0028260565 scopus 로고
    • Loop-sheet polymerization: The structural basis of Z alpha1-antitrypsin accumulation in the liver
    • Lomas DA (1994) Loop-sheet polymerization: the structural basis of Z alpha1-antitrypsin accumulation in the liver. Clin Sci (Lond) 86, 489 495.
    • (1994) Clin Sci (Lond) , vol.86 , pp. 489-495
    • Lomas, D.A.1
  • 31
    • 0031577721 scopus 로고    scopus 로고
    • The effects of reactive centre loop length upon serpin polymerisation
    • Bottomley SP Chang WS (1997) The effects of reactive centre loop length upon serpin polymerisation. Biochem Biophys Res Commun 241, 264 269.
    • (1997) Biochem Biophys Res Commun , vol.241 , pp. 264-269
    • Bottomley, S.P.1    Chang, W.S.2
  • 32
    • 0347753712 scopus 로고    scopus 로고
    • Physical characterization of serpin conformations
    • Dafforn TR, Pike RN Bottomley SP (2004) Physical characterization of serpin conformations. Methods 32, 150 158.
    • (2004) Methods , vol.32 , pp. 150-158
    • Dafforn, T.R.1    Pike, R.N.2    Bottomley, S.P.3
  • 33
    • 0000925011 scopus 로고
    • Analysis of protein conformation by gel electrophoresis
    • In. Creighton, T.E., ed.), pp. IRL Press, New York, NY.
    • Goldenberg DP (1989) Analysis of protein conformation by gel electrophoresis. In Protein Structure: a Practical Approach (Creighton TE, ed.), pp. 225 250. IRL Press, New York, NY.
    • (1989) Protein Structure: A Practical Approach , pp. 225-250
    • Goldenberg, D.P.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.