Phylogenetic relationships of Xylella fastidiosa strains isolated from landscape ornamentals in southern California

Phytopathology

Volumn 97, Issue 7, 2007, Pages 857-864

  Hernandez Martinez, Rufina ^a   De La Cerda, Karla A ^a   Costa, Heather S ^a   Cooksey, Donald A ^a   Wong, Francis P ^a  

^a UNIVERSITY OF CALIFORNIA   (United States)

Author keywords

Glassy winged sharpshooter

Indexed keywords

BACTERIA (MICROORGANISMS); CERCIS; CYTISUS MULTIFLORUS; GINKGO BILOBA; HEMEROCALLIS HYBRID CULTIVAR; HEXAPODA; HOMALODISCA COAGULATA; JACARANDA; LIQUIDAMBAR; MAGNOLIA; MAGNOLIACEAE; MORUS (PLANT); NANDINA DOMESTICA; NERIUM; PRUNUS DOMESTICA; PRUNUS PERSICA; VITACEAE; XYLELLA FASTIDIOSA;

EID: 34447130309     PISSN: 0031949X     EISSN: None     Source Type: Journal    
DOI: 10.1094/PHYTO-97-7-0857     Document Type: Article

References (54)

1. Albibi, R., Chen, J., Lamikanra, O., Banks, D., Jarret, R. L., and Smith, B. J. 1998. RAPD fingerprinting Xylella fastidiosa Pierce's disease strains isolated from a vineyard in north Florida. FEMS Microbiol. Lett. 165:347-352.
2. Almeida, R. P. P., and Purcell, A. H. 2003. Biological traits of Xylella fastidiosa strains from grapes and almonds. Appl. Environ. Microbiol. 69:7447-7452.
3. Barnard, E. L., Ash, E. C., Hopkins, D. L., and McGovern, R. J. 1998. Distribution of Xylella fastidiosa in oaks in Florida and its association with growth decline in Quercus laevis. Plant Dis. 82:569-572.
4. Blake, J. H. 1993. Distribution of Xylella fastidiosa in oak, maple, and sycamore in South Carolina. Plant Dis. 77:1262.
5. Blua, M. J., and Morgan, D. J. W. 2003. Dispersion of Homalodisca coagulata (Hemiptera: Cicadellidae), a vector of Xylella fastidiosa, into vineyards in southern California. J. Econ. Entomol. 96:1369-1374.
6. Chang, C. J., and Walker, J. T. 1988. Bacterial leaf scorch of northern red oak: Isolation, cultivation, and pathogenicity of a xylem-limited bacterium. Plant Dis. 72:730-733.
7. Chen, J., Chang, C. J., Jarret, R. L., and Gawel, N. 1992. Genetic-variation among Xylella fastidiosa strains. Phytopathology 82:973-977.
8. Chen, J., Groves, R., Civerolo, E. L., Viveros, A., Freeman, A., and Zheng, Y. 2005. Two Xylella fastidiosa genotypes associated with almond leaf scorch disease on the same location in California. Phytopathology 95:708-714.
9. Chen, J., Jarret, R. L., Qin, X., Hartung, J. S., Banks, D., Chang, C. J., and Hopkins, D. L. 2000. 16S rDNA sequence analysis of Xylella fastidiosa strains. Syst. Appl. Microbiol. 23:349-354.
10. Chen, J., Lamikanra, O., Chang, C. J., and Hopkins, D. L. 1995. Randomly amplified polymorphic DNA analysis of Xylella fastidiosa Pierce's disease and oak leaf scorch pathotypes. Appl. Environ. Microbiol. 61:1688-90.
11. Chen, J. C., Banks, D., Jarret, R. L., Chang, C. J., and Smith, B. J. 2000. Use of 16S rDNA sequences as signature characters to identify Xylella fastidiosa. Curr. Microbiol. 40:29-33.
12. Chen, J. C., Banks, D., Jarret, R. L., and Jones, J. B. 2000. Evidence for conserved tRNA genes in the 16S-23S rDNA spacer sequence and two rrn operons of Xylella fastidiosa. Can. J. Microbiol. 46:1171-1175.
13. Chen, J. C., Civerolo, E. L., Jarret, R. L., Van Sluys, M. A., and de Oliveira, M. C. 2005. Genetic discovery in Xylella fastidiosa through sequence analysis of selected randomly amplified polymorphic DNAs. Curr. Microbiol. 50:78-83.
14. Chen, J. C., Hartung, J. S., Chang, C. J., and Vidaver, A. K. 2002. An evolutionary perspective of Pierce's disease of grapevine, citrus variegated chlorosis, and mulberry leaf scorch diseases. Curr. Microbiol. 45:423-428.
15. Costa, H. S., Guzman, A., Hernandez-Martinez, R., Gispert, C., and Cooksey, D. A. 2006. Detection and differentiation of Xylella fastidiosa strains acquired and retained by glassy-winged sharpshooters (Hemiptera: Cicadellidae) using a mixture of strain-specific primer sets. J. Econ. Entomol. 99:1058-1064.
16. Costa, H. S., Raetz, E., Pinckard, T. R., Gispert, C., Hernandez-Martinez, R., Dumenyo, C. K., and Cooksey., D. A. 2004. Plant hosts of Xylella fastidiosa in and near southern California vineyards. Plant Dis. 88:1255-1261.
17. Davis, M. J., Purcell, A. H., and Thomson, S. V. 1978. Pierce's disease of grapevines isolation of the causal bacterium. Science 199:75-77.
18. Davis, M. J., Purcell, A. H., and Thomson, S. V. 1980. Isolation media for the Pierce's disease bacterium. Phytopathology 70:425-429.
19. Davis, M. J., Raju, B. C., Brlansky, R. H., Lee, R. F., Timmer, L. W., Norris, R. C., and McCoy, R. E. 1983. Periwinkle wilt bacterium: axenic culture, pathogenicity, and relationships to other gram-negative, xylem-inhabiting bacteria. Phytopathology 73:1510-1515.
20. De Lima, J. E. O., Miranda, V. S., Hartung, J. S., Brlansky, R. H., Coutinho, A., Roberto, S. R., and Carlos, E. F. 1998. Coffee leaf scorch bacterium: axenic culture, pathogenicity, and comparison with Xylella fastidiosa of citrus. Plant Dis. 82:94-97.
21. French, W. J. 1982. Reciprocal transmission of plum leaf scald and phony disease of peach. Phytopathology 72:452-453.
22. Goheen, A. C., Nyland, G., and Lowe, S. K. 1973. Association of a rickettsia-like organism with Pierce's disease of grapevines and alfalfa dwarf and heat therapy of the disease in grapevines. Phytopathology 63:341-345.
23. Gould, A. B., Wells, J. M., and Clarke, B. B. 1992. Distribution of oak leaf scorch in the Delaware Valley, New Jersey. (Abstr.) Phytopathology 82:1160.
24. Hearon, S. S., Sherald, J. L., and Kostka, S. J. 1980. Association of xylem limited bacteria with elm Ulmus americana, sycamore Platanus spp. and oak Quercus sp. leaf scorch. Can. J. Bot. 58:1986-1993.
25. Hendson, M., Purcell, A. H., Chen, D. Q., Smart, C., Guilhabert, M., and Kirkpatrick, B. 2001. Genetic diversity of Pierce's disease strains and other pathotypes of Xylella fastidiosa. Appl. Environ. Microbiol. 67:895-903.
26. Hernandez-Martinez, R., Costa, H. S., Cooksey, D. A., and Wong, F. P. 2006. Sweet gum dieback in southern California caused by Xylella fastidiosa. (Abstr.) Phytopathology 96:S47.
27. Hernandez-Martinez, R., Costa, H. S., Dumenyo, C. K., and Cooksey, D. A. 2006. Differentiation of strains of Xylella fastidiosa infecting grape, almonds and oleander using a multiprimer PCR assay. Plant Dis. 90:1382-1388.
28. Hernandez-Martinez, R., Dumenyo, C. K., Azad, H., Costa, H. S., Wong, F. P., and Cooksey, D. A. 2004. Phylogenetic analyses of Xylella fastidiosa strains isolated from ornamental hosts. (Abstr.) Phytopathology 94:S152.
29. Hernandez-Martinez, R., Pinckard, T. R., Costa, H. S., Cooksey, D. A., and Wong, F. P. 2006. Discovery and characterization of Xylella fastidiosa strains in southern California causing mulberry leaf scorch. Plant Dis. 90:1143-1149.
30. Hill, B. L., and Purcell, A. H. 1995. Multiplication and movement of Xylella fastidiosa within grapevine and four other plants. Phytopathology 85:1368-1372.
31. Hopkins, D. L., and Purcell, A. H. 2002. Xylella fastidiosa: Cause of Pierce's disease of grapevine and other emergent diseases. Plant Dis. 86:1056-1066.
32. Huang, Q., and Sherald, J. 2004. Isolation and phylogenetic analysis of Xylella fastidiosa from its invasive alternative host, porcelain berry. Curr. Microbiol. 48:73-76.
33. Kostka, S. J., Sherald, J. L., Hearon, S. S., and Rissler, J. F. 1980. Serological Relatedness of elm and oak scorch associated bacteria to the Pierce's disease bacterium. Phytopathology 70:689-690.
34. Kostka, S. J., Sherald, J. L., and Tattar, T. A. 1982. Isolation of bacteria from three elm species and mulberry exhibiting leaf scorch. (Abstr.) Phytopathology 72:936.
35. Kumar, S., Tamura K., and Nei, M. 2004. MEGA3: Integrated software for molecular evolutionary genetics analysis and sequence alignment. Brief. Bioinf. 5:150-163.
36. McGovern, R. J., and Hopkins, D. L. 1994. Association of Xylella fastidiosa with leaf scorch and decline of live oak in Florida. Plant Dis. 78:924.
37. Mehta, A., and Rosato, Y. B. 2001. Phylogenetic relationships of Xylella fastidiosa strains from different hosts, based on 16S rDNA and 16S-23S intergenic spacer sequences. Int. J. Syst. Evol. Microbiol. 51:311-318.
38. Meyer, M., Kocsis, L., and Walker, A. 2002. Transmission of Pierce's disease by chip-budding and bench-grafting. Am. J. Enol. Viticult. 53:248A.
39. Minsavage, G. V., Thompson, C. M., Hopkins, D. L., Leite, R. M. V. B. C., and Stall, R. E. 1994. Development of a polymerase chain reaction protocol for detection of Xylella fastidiosa in plant tissue. Phytopathology 84:456-461.
40. Mircetich, S. M., Lowe, S. K., Moller, W. J., and Nyland, G. 1976. Etiology of almond leaf scorch disease and transmission of the causal agent. Phytopathology 66:17-24.
41. Page, R. D. M. 1996. TREEVIEW: An application to display phylogenetic trees on personal computers. Comput. Appl. Biosci. 12:357-358.
42. Purcell, A. H., Finlay, A. H., and McLean, D. L. 1979. Pierce's disease bacterium mechanism of transmission by leafhopper vectors. Science 206:839-841.
43. Purcell, A. H., and Saunders, S. R. 1999. Fate of Pierce's disease strains of Xylella fastidiosa in common riparian plants in California. Plant Dis. 83:825-830.
44. Purcell, A. H., Saunders, S. R., Hendson, M., Grebus, M. E., and Henry, M. J. 1999. Causal role of Xylella fastidiosa in oleander leaf scorch disease. Phytopathology 89:53-58.
45. Schaad, N. W., Postnikova, E., Lacy, G., Fatmi, M. B., and Chang, C.-J. 2004. Xylella fastidiosa subspecies: X. fastidiosa subsp. fastidiosa, subsp. multiplex subsp. nov., and X. fastidiosa subsp. pauca. Syst. Appl. Microbiol. 27:290-300.
46. Schuenzel, E. L., Scally, M., Southammer, R., and Nunney, L. 2005. A multigene phylogenetic study of clonal diversity and divergence in North American strains of the plant pathogen Xylella fastidiosa. Appl. Environ. Microbiol. 71:3832-3839.
47. Sherald, J., Hearon, S., Kostka, S., and Morgan, D. 1982. Pathogenicity of a Pierce's disease (PD)-like bacterium cultured from leaf scorch affected sycamores. (Abstr.) Phytopathology 72:710.
48. Sherald, J. L., Wells, J. M., Hurtt, S. S., and Kostka, S. J. 1987. Association of fastidious xylem-inhabiting bacteria with leaf scorch in red maple. Plant Dis. 71:930-933.
49. Staley, J., and Krieg, N. R. 1984. Bacterial classification I. Classification of procaryotic organisms: An overwiev. Pages 1-4 in: Bergey's Manual of Systematic Bacteriology, Vol. 1. N. R. Krieg and J. G. Holt, eds. Williams and Wilkins, Baltimore.
50. Swofford, D. L. 2002. Phylogenetic Analysis Using Parsimony (and Other Methods). Sinauer Associates, Sunderland, MA.
51. Thompson, J. D., Gibson, T. J., Plewniak, F., Jeanmougin, F., and Higgins, D. G. 1997. The CLUSTAL_X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res. 25:4876-4882.
52. Turner, W. P., and Herschel, N. 1959. Life histories and behavior of five insect vectors of phony peach disease. U. S. Dep. Agric. Tech. Bull. 1188.
53. Wells, J. M., Raju, B. C., Hung, H. Y., Weisburg, W. G., Mandelco-Paul, L., and Brenner, D. J. 1987. Xylella fastidiosa new-genus new-species Gram-negative xylem-limited fastidious plant bacteria related to Xanthomonas spp. Int. J. Syst. Bacteriol. 37:136-143.
54. Wells, J. M., Raju, B. C., Thompson, J. M., and Lowe, S. K. 1981. Etiology of phony peach and plum leaf scald diseases. Phytopathology 71:1156-1161.