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Volumn 103, Issue 1, 2007, Pages 252-260

Cloning, sequencing and characterization of a urease gene operon from urease-positive thermophilic Campylobacter (UPTC)

Author keywords

Accessory genes; Overlap genes; PCR; Structural genes; TTG start codon; Urease operon; Urease positive thermophilic Campylobacter

Indexed keywords

BACTERIA; BINDING SITES; CLONING; GENE ENCODING; METABOLISM; POLYMERASE CHAIN REACTION; TREES (MATHEMATICS);

EID: 34250864346     PISSN: 13645072     EISSN: 13652672     Source Type: Journal    
DOI: 10.1111/j.1365-2672.2006.03212.x     Document Type: Article
Times cited : (12)

References (46)
  • 1
    • 0034076830 scopus 로고    scopus 로고
    • Identification of the urease operon in Helicobacter pylori and its control by mRNA decay in response to pH
    • Akada, J.K., Shirai, M., Takeuchi, H., Tsuda, M. Nakazawa, T. (2000) Identification of the urease operon in Helicobacter pylori and its control by mRNA decay in response to pH. Mol Microbiol 36, 1071 1084.
    • (2000) Mol Microbiol , vol.36 , pp. 1071-1084
    • Akada, J.K.1    Shirai, M.2    Takeuchi, H.3    Tsuda, M.4    Nakazawa, T.5
  • 2
    • 0034874511 scopus 로고    scopus 로고
    • Cloning, expression, and catalytic activity of Helicobacter hepaticus urease
    • Beckwith, C.S., McGee, D.J., Mobley, H.L. Riley, L.K. (2001) Cloning, expression, and catalytic activity of Helicobacter hepaticus urease. Infect Immun 69, 5914 5920.
    • (2001) Infect Immun , vol.69 , pp. 5914-5920
    • Beckwith, C.S.1    McGee, D.J.2    Mobley, H.L.3    Riley, L.K.4
  • 3
    • 0020522358 scopus 로고
    • Description of Campylobacter laridis, a new species comprising the nalidixic acid resistant thermophilic Campylobacter (NARTC) group
    • Benjamin, J., Leaper, S., Owen, R.J. Skirrow, M.B. (1983) Description of Campylobacter laridis, a new species comprising the nalidixic acid resistant thermophilic Campylobacter (NARTC) group. Curr Microbiol 8, 231 238.
    • (1983) Curr Microbiol , vol.8 , pp. 231-238
    • Benjamin, J.1    Leaper, S.2    Owen, R.J.3    Skirrow, M.B.4
  • 4
    • 0025632887 scopus 로고
    • Isolation of a urease positive thermophilic variant of Campylobacter lari from a patient with urinary tract infection
    • Bezian, M.C., Ribou, G., Barberis-Giletti, C. Megraud, F. (1990) Isolation of a urease positive thermophilic variant of Campylobacter lari from a patient with urinary tract infection. Eur J Clin Microbiol Infect Dis 9, 895 897.
    • (1990) Eur J Clin Microbiol Infect Dis , vol.9 , pp. 895-897
    • Bezian, M.C.1    Ribou, G.2    Barberis-Giletti, C.3    Megraud, F.4
  • 5
    • 0022432206 scopus 로고
    • Urease-positive thermophilic campylobacters
    • Bolton, F.J., Holt, A.V. Hutchinson, D.N. (1985) Urease-positive thermophilic campylobacters. Lancet 1, 1217 1218.
    • (1985) Lancet , vol.1 , pp. 1217-1218
    • Bolton, F.J.1    Holt, A.V.2    Hutchinson, D.N.3
  • 6
    • 0027474146 scopus 로고
    • Characterization of a plasmid-encoded urease gene cluster found among members of the family Enterobacteriaceae
    • D'Orazio, S.E.F. Collins, C.M. (1993a) Characterization of a plasmid-encoded urease gene cluster found among members of the family Enterobacteriaceae. J Bacteriol 175, 1860 1864.
    • (1993) J Bacteriol , vol.175 , pp. 1860-1864
    • D'Orazio, S.E.F.1    Collins, C.M.2
  • 7
    • 0027191825 scopus 로고
    • The plasmid-encoded urease gene cluster of the family Enterobacteriaceae is positively regulated by ureR, a member of the AraC family of transcriptional activators
    • D'Orazio, S.E.F. Collins, C.M. (1993b) The plasmid-encoded urease gene cluster of the family Enterobacteriaceae is positively regulated by ureR, a member of the AraC family of transcriptional activators. J Bacteriol 175, 3459 3467.
    • (1993) J Bacteriol , vol.175 , pp. 3459-3467
    • D'Orazio, S.E.F.1    Collins, C.M.2
  • 8
    • 0030914437 scopus 로고    scopus 로고
    • Clostridium perfringens urease genes are plasmid borne
    • Dupuy, B., Daube, G., Popoff, M.R. Cole, S.T. (1997) Clostridium perfringens urease genes are plasmid borne. Infect Immun 65, 2313 2320.
    • (1997) Infect Immun , vol.65 , pp. 2313-2320
    • Dupuy, B.1    Daube, G.2    Popoff, M.R.3    Cole, S.T.4
  • 10
    • 0027203527 scopus 로고
    • Cloning, expression and sequencing of Helicobacter felis urease genes
    • Ferrero, R.L. Labigne, A. (1993) Cloning, expression and sequencing of Helicobacter felis urease genes. Mol Microbiol 9, 323 333.
    • (1993) Mol Microbiol , vol.9 , pp. 323-333
    • Ferrero, R.L.1    Labigne, A.2
  • 11
    • 0002591844 scopus 로고    scopus 로고
    • Campylobacters in wild birds: Identification and molecular characterization
    • In. ed. Lastovica, A.J., Newell, D.G. Lastovica, E.E. p. Cape Town, South Africa: Rustica Press.
    • Fitzgerald, C., Jones, K., Anderton, S. Andrew, S. (1998) Campylobacters in wild birds: identification and molecular characterization. In Campylobacter, Helicobacter and related organisms ed. Lastovica, A.J., Newell, D.G. Lastovica, E.E. p. 80. Cape Town, South Africa : Rustica Press.
    • (1998) Campylobacter, Helicobacter and Related Organisms , pp. 80
    • Fitzgerald, C.1    Jones, K.2    Anderton, S.3    Andrew, S.4
  • 12
    • 0023146542 scopus 로고
    • Nickel utilization by microorganisms
    • Hausinger, R.P. (1987) Nickel utilization by microorganisms. Microbiol Rev 51, 22 42.
    • (1987) Microbiol Rev , vol.51 , pp. 22-42
    • Hausinger, R.P.1
  • 13
    • 0019947372 scopus 로고
    • Determination of ammonia in saliva using indophenol, an ammonium electrode and an enzymatic method: A comparative investigation
    • Huizenga, J.R. Gips, C.H. (1982) Determination of ammonia in saliva using indophenol, an ammonium electrode and an enzymatic method: a comparative investigation. J Clin Clem Clin Biochem 20, 571 574.
    • (1982) J Clin Clem Clin Biochem , vol.20 , pp. 571-574
    • Huizenga, J.R.1    Gips, C.H.2
  • 14
    • 0024398161 scopus 로고
    • Proteus mirabilis urease: Nucleotide sequence determination and comparison with jack bean urease
    • Jones, B.D. Mobley, H.L.T. (1989) Proteus mirabilis urease: nucleotide sequence determination and comparison with jack bean urease. J Bacteriol 171, 6414 6422.
    • (1989) J Bacteriol , vol.171 , pp. 6414-6422
    • Jones, B.D.1    Mobley, H.L.T.2
  • 15
    • 0032780053 scopus 로고    scopus 로고
    • Urease-positive thermophilic strains of Campylobacter isolated from seagulls (Larus spp.)
    • Kaneko, A., Matsuda, M., Miyajima, M., Moore, J.E. Murphy, P.G. (1999) Urease-positive thermophilic strains of Campylobacter isolated from seagulls (Larus spp.). Lett Appl Microbiol 29, 7 9.
    • (1999) Lett Appl Microbiol , vol.29 , pp. 7-9
    • Kaneko, A.1    Matsuda, M.2    Miyajima, M.3    Moore, J.E.4    Murphy, P.G.5
  • 16
    • 0025979283 scopus 로고
    • Shuttle cloning and nucleotide sequences of Helicobacter pylori genes responsible for urease activity
    • Labigne, A., Cussac, V. Courcoux, P. (1991) Shuttle cloning and nucleotide sequences of Helicobacter pylori genes responsible for urease activity. J Bacteriol 173, 1920 1931.
    • (1991) J Bacteriol , vol.173 , pp. 1920-1931
    • Labigne, A.1    Cussac, V.2    Courcoux, P.3
  • 17
    • 0028031878 scopus 로고
    • Cloning, sequencing, and expression of thermophilic Bacillus sp. strain TB-90 urease gene complex in Escherichia coli
    • Maeda, M., Hidaka, M., Nakamura, A., Masaki, H. Uozumi, T. (1994) Cloning, sequencing, and expression of thermophilic Bacillus sp. strain TB-90 urease gene complex in Escherichia coli. J Bacteriol 176, 432 442.
    • (1994) J Bacteriol , vol.176 , pp. 432-442
    • Maeda, M.1    Hidaka, M.2    Nakamura, A.3    Masaki, H.4    Uozumi, T.5
  • 18
    • 0029749885 scopus 로고    scopus 로고
    • First finding of urease-positive thermophilic strains of Campylobacter in river water in the Far East, namely, in Japan, and their phenotypic and genotypic characterization
    • Matsuda, M., Kaneko, A., Fukuyama, M., Itoh, T., Shingaki, M., Inoue, M., Moore, J.E., Murphy, P.G. et al. (1996) First finding of urease-positive thermophilic strains of Campylobacter in river water in the Far East, namely, in Japan, and their phenotypic and genotypic characterization. J Appl Bacteriol 81, 608 612.
    • (1996) J Appl Bacteriol , vol.81 , pp. 608-612
    • Matsuda, M.1    Kaneko, A.2    Fukuyama, M.3    Itoh, T.4    Shingaki, M.5    Inoue, M.6    Moore, J.E.7    Murphy, P.G.8
  • 20
    • 0036384208 scopus 로고    scopus 로고
    • Plasmid profiles of urease-positive thermophilic Campylobacter (UPTC) strains isolated in Europe and Asia (Japan)
    • Matsuda, M., Eda, Y., Isobe, K. Moore, J.E. (2002b) Plasmid profiles of urease-positive thermophilic Campylobacter (UPTC) strains isolated in Europe and Asia (Japan). Br J Biomed Sci 59, 158 160.
    • (2002) Br J Biomed Sci , vol.59 , pp. 158-160
    • Matsuda, M.1    Eda, Y.2    Isobe, K.3    Moore, J.E.4
  • 21
    • 0037641165 scopus 로고    scopus 로고
    • Characterization of urease-positive thermophilic Campylobacter subspecies by multilocus enzyme electrophoresis typing
    • Matsuda, M., Kaneko, A., Stanley, T., Millar, B.C., Miyajima, M., Murphy, P.G. Moore, J.E. (2003) Characterization of urease-positive thermophilic Campylobacter subspecies by multilocus enzyme electrophoresis typing. Appl Environ Microbiol 69, 3308 3310.
    • (2003) Appl Environ Microbiol , vol.69 , pp. 3308-3310
    • Matsuda, M.1    Kaneko, A.2    Stanley, T.3    Millar, B.C.4    Miyajima, M.5    Murphy, P.G.6    Moore, J.E.7
  • 22
    • 4143118902 scopus 로고    scopus 로고
    • Urease-positive thermophilic Campylobacter species
    • Matsuda, M. Moore, J.E. (2004) Urease-positive thermophilic Campylobacter species. Appl Environ Microbiol 70, 4415 4418.
    • (2004) Appl Environ Microbiol , vol.70 , pp. 4415-4418
    • Matsuda, M.1    Moore, J.E.2
  • 23
    • 0023916043 scopus 로고
    • Urease-positive thermophilic Campylobacter Campylobacter laridis variant isolated from an appendix and from human feces
    • Megraud, F., Chevrier, D., Desplaces, N., Sedallian, A. Guesdon, J.L. (1988) Urease-positive thermophilic Campylobacter Campylobacter laridis variant isolated from an appendix and from human feces. J Clin Mirobiol 26, 1050 1051.
    • (1988) J Clin Mirobiol , vol.26 , pp. 1050-1051
    • Megraud, F.1    Chevrier, D.2    Desplaces, N.3    Sedallian, A.4    Guesdon, J.L.5
  • 25
    • 0024514293 scopus 로고
    • Microbial ureases: Significance, regulation, and molecular characterization
    • Mobley, H.L.T. Hausinger, R.P. (1989) Microbial ureases: significance, regulation, and molecular characterization. Microbiol Rev 53, 85 108.
    • (1989) Microbiol Rev , vol.53 , pp. 85-108
    • Mobley, H.L.T.1    Hausinger, R.P.2
  • 27
    • 0025106239 scopus 로고
    • Sequence of the Klebsiella aerogenes urease genes and evidence for accessory proteins facilitating nickel incorporation
    • Mulrooney, S.B. Hausinger, R.P. (1990) Sequence of the Klebsiella aerogenes urease genes and evidence for accessory proteins facilitating nickel incorporation. J Bacteriol 172, 5837 5843.
    • (1990) J Bacteriol , vol.172 , pp. 5837-5843
    • Mulrooney, S.B.1    Hausinger, R.P.2
  • 28
    • 0029671377 scopus 로고    scopus 로고
    • Organization of Ureaplasma urealyticum urease gene cluster and expression in a suppressor strain of Escherichia coli
    • Neyrolles, O., Ferris, S., Behbahani, N., Montagnier, L. Blanchard, A. (1996) Organization of Ureaplasma urealyticum urease gene cluster and expression in a suppressor strain of Escherichia coli. J Bacteriol 178, 647 655.
    • (1996) J Bacteriol , vol.178 , pp. 647-655
    • Neyrolles, O.1    Ferris, S.2    Behbahani, N.3    Montagnier, L.4    Blanchard, A.5
  • 29
    • 0024262084 scopus 로고
    • Affinity labeling of tRNA-binding sites on ribosomes
    • Ofengand, J., Denman, R., Nurse, K. Liebman, A. (1988) Affinity labeling of tRNA-binding sites on ribosomes. Meth Enzymol 164, 372 397.
    • (1988) Meth Enzymol , vol.164 , pp. 372-397
    • Ofengand, J.1    Denman, R.2    Nurse, K.3    Liebman, A.4
  • 30
    • 0031942287 scopus 로고    scopus 로고
    • Emended description of Campylobacter sputorum and revision of its infrasubspecific (biovar) divisions, including C. sputorum biovar paraureolyticus, a urease-producing variant from cattle and humans
    • On, S.L.W., Atabay, H.I., Corry, J.E.E., Harrington, C.S. Vandamme, P. (1998) Emended description of Campylobacter sputorum and revision of its infrasubspecific (biovar) divisions, including C. sputorum biovar paraureolyticus, a urease-producing variant from cattle and humans. Int J Syst Bacteriol 48, 195 206.
    • (1998) Int J Syst Bacteriol , vol.48 , pp. 195-206
    • On, S.L.W.1    Atabay, H.I.2    Corry, J.E.E.3    Harrington, C.S.4    Vandamme, P.5
  • 31
    • 0023787758 scopus 로고
    • Numerical analysis of electrophoretic protein patterns of Campylobacter laridis and allied thermophilic campylobacters from the natural environment
    • Owen, R.J., Costas, M., Sloss, L. Bolton, F.J. (1988) Numerical analysis of electrophoretic protein patterns of Campylobacter laridis and allied thermophilic campylobacters from the natural environment. J Appl Bacteriol 65, 69 78.
    • (1988) J Appl Bacteriol , vol.65 , pp. 69-78
    • Owen, R.J.1    Costas, M.2    Sloss, L.3    Bolton, F.J.4
  • 32
    • 0037423768 scopus 로고    scopus 로고
    • RpoD promoters in Campylobacter jejuni exhibit a strong periodic signal instead of a -35 box
    • Petersen, L., Larsen, T.S., Ussery, D.W., On, S.L. Krogh, A. (2003) RpoD promoters in Campylobacter jejuni exhibit a strong periodic signal instead of a -35 box. J Mol Biol 326, 1361 1372.
    • (2003) J Mol Biol , vol.326 , pp. 1361-1372
    • Petersen, L.1    Larsen, T.S.2    Ussery, D.W.3    On, S.L.4    Krogh, A.5
  • 34
    • 0023375195 scopus 로고
    • The neighbour-joining method: A new method for reconstructing phylogenetic trees
    • Saitou, N. Nei, M. (1987) The neighbour-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4, 406 425.
    • (1987) Mol Biol Evol , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 36
    • 0019257523 scopus 로고
    • '1001' Campylobacters: Cultural characteristics of intestinal campylobacters from man and animals
    • Skirrow, M.B. Benjamin, J. (1980) '1001' Campylobacters: cultural characteristics of intestinal campylobacters from man and animals. J Hyg (Camb) 85, 427 442.
    • (1980) J Hyg (Camb) , vol.85 , pp. 427-442
    • Skirrow, M.B.1    Benjamin, J.2
  • 37
    • 0028215785 scopus 로고
    • Molecular analysis of urease genes from a newly identified uncultured species of Helicobacter
    • Solnick, J.V., O'Rourke, J., Lee, A. Tompkins, L.S. (1994) Molecular analysis of urease genes from a newly identified uncultured species of Helicobacter. Infect Immun 62, 1631 1638.
    • (1994) Infect Immun , vol.62 , pp. 1631-1638
    • Solnick, J.V.1    O'Rourke, J.2    Lee, A.3    Tompkins, L.S.4
  • 38
    • 0029090124 scopus 로고
    • Construction and characterization of an isogenic urease-negative mutant of Helicobacter mustelae
    • Solnick, J.V., Josenhans, C., Suerbaum, S., Tompkins, L.S. Labigne, A. (1995) Construction and characterization of an isogenic urease-negative mutant of Helicobacter mustelae. Infect Immun 63, 3718 3721.
    • (1995) Infect Immun , vol.63 , pp. 3718-3721
    • Solnick, J.V.1    Josenhans, C.2    Suerbaum, S.3    Tompkins, L.S.4    Labigne, A.5
  • 39
    • 0024296520 scopus 로고
    • Covalent cross-linking of poly(A) to Escherichia coli ribosomes, and localization of the cross-link site within the 16S RNA
    • Stiege, W., Stade, K., Schuler, D. Brimacombe, R. (1988) Covalent cross-linking of poly(A) to Escherichia coli ribosomes, and localization of the cross-link site within the 16S RNA. Nucleic Acids Res 25, 2369 2388.
    • (1988) Nucleic Acids Res , vol.25 , pp. 2369-2388
    • Stiege, W.1    Stade, K.2    Schuler, D.3    Brimacombe, R.4
  • 40
    • 0027968068 scopus 로고
    • CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • Thompson, J.D., Higgins, D.G. Gibson, T.J. (1994) CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22, 4673 4680.
    • (1994) Nucleic Acids Res , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 42
    • 0035073399 scopus 로고    scopus 로고
    • Recommendations of the subcommittee on the taxonomy of Campylobacter and related bacteria
    • Vandamme, P. On, S.L.W. (2001) Recommendations of the subcommittee on the taxonomy of Campylobacter and related bacteria. Int J Syst Evol Microbiol 51, 719 721.
    • (2001) Int J Syst Evol Microbiol , vol.51 , pp. 719-721
    • Vandamme, P.1    On, S.L.W.2
  • 43
    • 0025349891 scopus 로고
    • Revised nomenclature of Campylobacter laridis, Enterobacter intermedium, and ''Flavobacterium branchiophila''
    • Von Graevenitz, A. (1990) Revised nomenclature of Campylobacter laridis, Enterobacter intermedium, and ''Flavobacterium branchiophila''. Int J Syst Bacteriol 40, 211.
    • (1990) Int J Syst Bacteriol , vol.40 , pp. 211
    • Von Graevenitz, A.1
  • 44
    • 0030003864 scopus 로고    scopus 로고
    • Presence of Salmonella spp. and Campylobacter spp. in shellfish
    • Wilson, I.G. Moore, J.E. (1996) Presence of Salmonella spp. and Campylobacter spp. in shellfish. Epidemiol Infect 116, 147 153.
    • (1996) Epidemiol Infect , vol.116 , pp. 147-153
    • Wilson, I.G.1    Moore, J.E.2


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