-
1
-
-
0036199303
-
Molecular evolution of the NF-κB signaling system
-
Friedman R, Hughes AL: Molecular evolution of the NF-κB signaling system, Immunogenetics 2002, 53:964-974.
-
(2002)
Immunogenetics
, vol.53
, pp. 964-974
-
-
Friedman, R.1
Hughes, A.L.2
-
2
-
-
0842324557
-
The molecular evolution of the interleukin-I family of cytokines; IL-18 in teleost fish
-
Huising MO, Stet RJ, Savelkoul HF, Verburg-van Kemenade BM: The molecular evolution of the interleukin-I family of cytokines; IL-18 in teleost fish. Dev Comp Immunol 2004, 28:395-413.
-
(2004)
Dev Comp Immunol
, vol.28
, pp. 395-413
-
-
Huising, M.O.1
Stet, R.J.2
Savelkoul, H.F.3
Verburg-van Kemenade, B.M.4
-
3
-
-
0742272503
-
A systems approach to dissecting immunity and inflammation
-
Aderem A, Smith KD: A systems approach to dissecting immunity and inflammation. Semin Immunol 2004, 16:55-67.
-
(2004)
Semin Immunol
, vol.16
, pp. 55-67
-
-
Aderem, A.1
Smith, K.D.2
-
4
-
-
34047199156
-
Molecular characterization of the immune system: Emergence of proteins, processes and domains
-
DOI: 10.1007/s00251-007-0191-0
-
Ortutay C, Siermala M, Vihinen M: Molecular characterization of the immune system: Emergence of proteins, processes and domains, /mmunogenet/cs 2007. DOI: 10.1007/s00251-007-0191-0
-
mmunogenet/cs
, vol.2007
-
-
Ortutay, C.1
Siermala, M.2
Vihinen, M.3
-
5
-
-
34250879397
-
-
ImmTree [http://bioinf.uta.fi/ImmTree]
-
-
-
ImmTree1
-
6
-
-
13444312023
-
IMGT, the international ImMunoGeneTics information system
-
Lefranc MP, Giudicelli V, Kaas Q, Duprat E, Jabado-Michaloud J, Scaviner D, Ginestoux C, Clement O, Chaume D, Lefranc G: IMGT, the international ImMunoGeneTics information system. Nucleic Acids Res 2005, 33:0593-597.
-
(2005)
Nucleic Acids Res
, vol.33
, pp. 0593-0597
-
-
Lefranc, M.P.1
Giudicelli, V.2
Kaas, Q.3
Duprat, E.4
Jabado-Michaloud, J.5
Scaviner, D.6
Ginestoux, C.7
Clement, O.8
Chaume, D.9
Lefranc, G.10
-
7
-
-
33750967067
-
The IMGT/HLA and IPD databases
-
Robinson J, Waller MJ, Fail SC, Marsh SG: The IMGT/HLA and IPD databases. Hum Mutot 2006, 27(12):1192-9.
-
(2006)
Hum Mutot
, vol.27
, Issue.12
, pp. 1192-1199
-
-
Robinson, J.1
Waller, M.J.2
Fail, S.C.3
Marsh, S.G.4
-
8
-
-
33846056843
-
Entrez Gene: Genecentered information at NCBI
-
Maglott D, Ostell J, Pruitt KD, Tatusova T: Entrez Gene: genecentered information at NCBI. Nucleic Acids Res 2007, 35:026-31.
-
(2007)
Nucleic Acids Res
, vol.35
, pp. 026-031
-
-
Maglott, D.1
Ostell, J.2
Pruitt, K.D.3
Tatusova, T.4
-
9
-
-
33846040633
-
GenBank
-
Benson DA, Karsch-Mizrachi I, Lipman DJ, Ostell J, Wheeler DL: GenBank. Nucleic Acids Res 2007, 35:D21-25.
-
(2007)
Nucleic Acids Res
, vol.35
-
-
Benson, D.A.1
Karsch-Mizrachi, I.2
Lipman, D.J.3
Ostell, J.4
Wheeler, D.L.5
-
10
-
-
0036125446
-
Cross-referencing eukaryotic genomes: TIGR Orthologous Gene Alignments (TOGA)
-
Lee Y, Sultana R, Pertea G, Cho J, Karamycheva S, Tsai J, Parvizi B, Cheung F, Antonescu V, White J, et al.: Cross-referencing eukaryotic genomes: TIGR Orthologous Gene Alignments (TOGA). Genome Res 2002, 12:493-502.
-
(2002)
Genome Res
, vol.12
, pp. 493-502
-
-
Lee, Y.1
Sultana, R.2
Pertea, G.3
Cho, J.4
Karamycheva, S.5
Tsai, J.6
Parvizi, B.7
Cheung, F.8
Antonescu, V.9
White, J.10
-
11
-
-
0034579044
-
NCBI genetic resources supporting immunogenetic research
-
Feolo M, Helmberg W, Sherry S, Maglott DR: NCBI genetic resources supporting immunogenetic research. Rev Immunogenet 2000, 2:461-467.
-
(2000)
Rev Immunogenet
, vol.2
, pp. 461-467
-
-
Feolo, M.1
Helmberg, W.2
Sherry, S.3
Maglott, D.R.4
-
12
-
-
33644787447
-
OrthoMCL-DB: Querying a comprehensive multi-species collection of ortholog groups
-
Chen F, Mackey AJ, Stoeckert CJ Jr, Roos DS: OrthoMCL-DB: querying a comprehensive multi-species collection of ortholog groups. Nucleic Acids Res 2006, 34:0363-368.
-
(2006)
Nucleic Acids Res
, vol.34
, pp. 0363-0368
-
-
Chen, F.1
Mackey, A.J.2
Stoeckert Jr, C.J.3
Roos, D.S.4
-
13
-
-
0027968068
-
CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
-
Thompson JD, Higgins DG, Gibson TJ: CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 1994, 22:4673-4680.
-
(1994)
Nucleic Acids Res
, vol.22
, pp. 4673-4680
-
-
Thompson, J.D.1
Higgins, D.G.2
Gibson, T.J.3
-
14
-
-
34250848060
-
PAUP*. Phylogenetic Analysis Using Parsimony (*and Other Methods). Version 4
-
Sinauer Associates;
-
Swofford DL: PAUP*. Phylogenetic Analysis Using Parsimony (*and Other Methods). Version 4. In Version 4 Sinauer Associates; 2003.
-
(2003)
Version 4
-
-
Swofford, D.L.1
-
15
-
-
0025183708
-
Basic local alignment search tool
-
Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ: Basic local alignment search tool. J Mol Biol 1990, 215:403-410.
-
(1990)
J Mol Biol
, vol.215
, pp. 403-410
-
-
Altschul, S.F.1
Gish, W.2
Miller, W.3
Myers, E.W.4
Lipman, D.J.5
-
16
-
-
18644368714
-
The Bioperl toolkit: Perl modules for the life sciences
-
Stajich JE, Block D, Boulez K, Brenner SE, Chervitz SA, Dagdigian C, Fuellen G, Gilbert JG, Korf I, Lapp H, et al.: The Bioperl toolkit: Perl modules for the life sciences. Genome Res 2002, 12:1611-1618.
-
(2002)
Genome Res
, vol.12
, pp. 1611-1618
-
-
Stajich, J.E.1
Block, D.2
Boulez, K.3
Brenner, S.E.4
Chervitz, S.A.5
Dagdigian, C.6
Fuellen, G.7
Gilbert, J.G.8
Korf, I.9
Lapp, H.10
-
17
-
-
0022507362
-
Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions
-
Nei M, Gojobori T: Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions. Mol Biol Evol 1986, 3:418-426.
-
(1986)
Mol Biol Evol
, vol.3
, pp. 418-426
-
-
Nei, M.1
Gojobori, T.2
-
18
-
-
33846041078
-
The Universal Protein Resource (UniProt)
-
The UniProt Consortium
-
The UniProt Consortium: The Universal Protein Resource (UniProt). Nucleic Acids Res 2007, 35:0193-197.
-
(2007)
Nucleic Acids Res
, vol.35
, pp. 0193-0197
-
-
-
19
-
-
33846116032
-
New developments in the InterPro database
-
Mulder NJ, Apweiler R, Attwood TK, Bairoch A, Bateman A, Binns D, Bork P, Buillard V, Cerutti L, Copley R, et al.: New developments in the InterPro database. Nucleic Acids Res 2007, 35:0224-228.
-
(2007)
Nucleic Acids Res
, vol.35
, pp. 0224-0228
-
-
Mulder, N.J.1
Apweiler, R.2
Attwood, T.K.3
Bairoch, A.4
Bateman, A.5
Binns, D.6
Bork, P.7
Buillard, V.8
Cerutti, L.9
Copley, R.10
-
20
-
-
0346801873
-
The Gene Ontology (GO) database and informatics resource
-
Harris MA, Clark J, Ireland A, Lomax J, Ashburner M, Foulger R, Eilbeck K, Lewis S, Marshall B, Mungall C, et al.: The Gene Ontology (GO) database and informatics resource. Nucleic Acids Res 2004, 32:0258-261.
-
(2004)
Nucleic Acids Res
, vol.32
, pp. 0258-0261
-
-
Harris, M.A.1
Clark, J.2
Ireland, A.3
Lomax, J.4
Ashburner, M.5
Foulger, R.6
Eilbeck, K.7
Lewis, S.8
Marshall, B.9
Mungall, C.10
-
21
-
-
33644876253
-
Database resources of the National Center for Biotechnology Information
-
Wheeler DL, Barrett T, Benson DA, Bryant SH, Canese K, Chetvernin V, Church DM, DiCuccio M, Edgar R, Federhen S, et al.: Database resources of the National Center for Biotechnology Information. Nucleic Acids Res 2006, 34:D 173-180.
-
(2006)
Nucleic Acids Res
, vol.34
, Issue.D
, pp. 173-180
-
-
Wheeler, D.L.1
Barrett, T.2
Benson, D.A.3
Bryant, S.H.4
Canese, K.5
Chetvernin, V.6
Church, D.M.7
DiCuccio, M.8
Edgar, R.9
Federhen, S.10
-
22
-
-
0036720020
-
The Ka/Ks ratio: Diagnosing the form of sequence evolution
-
Hurst LD: The Ka/Ks ratio: diagnosing the form of sequence evolution. Trends Genet 2002, 18:486.
-
(2002)
Trends Genet
, vol.18
, pp. 486
-
-
Hurst, L.D.1
-
23
-
-
0141519339
-
Widespread selection for local RNA secondary structure in coding regions of bacterial genes
-
Katz L, Burge CB: Widespread selection for local RNA secondary structure in coding regions of bacterial genes. Genome Res 2003, 13:2042-2051.
-
(2003)
Genome Res
, vol.13
, pp. 2042-2051
-
-
Katz, L.1
Burge, C.B.2
-
24
-
-
0031350056
-
NEXUS: An extensible file format for systematic information
-
Maddison OR, Swofford DL, Maddison WP: NEXUS: an extensible file format for systematic information. Syst Biol 1997, 46:590-621.
-
(1997)
Syst Biol
, vol.46
, pp. 590-621
-
-
Maddison, O.R.1
Swofford, D.L.2
Maddison, W.P.3
-
25
-
-
0035025126
-
ATV: Display and manipulation of annotated phylogenetic trees
-
Zmasek CM, Eddy SR: ATV: display and manipulation of annotated phylogenetic trees. Bioinformatics 2001, 17:383-384.
-
(2001)
Bioinformatics
, vol.17
, pp. 383-384
-
-
Zmasek, C.M.1
Eddy, S.R.2
-
26
-
-
13444257876
-
The Adaptive Evolution Database (TAED): A phylogeny based tool for comparative genomics
-
Roth C, Betts MJ, Steffansson P, Saelensminde G, Liberias DA: The Adaptive Evolution Database (TAED): a phylogeny based tool for comparative genomics. Nucleic Adds Res 2005, 33:0495-497.
-
(2005)
Nucleic Adds Res
, vol.33
, pp. 0495-0497
-
-
Roth, C.1
Betts, M.J.2
Steffansson, P.3
Saelensminde, G.4
Liberias, D.A.5
-
27
-
-
13444283795
-
-
Veeramachaneni V, Makalowski W: DED: Database of Evolutionary Distances. Nucleic Acids Res 2005, 33:0442-446.
-
Veeramachaneni V, Makalowski W: DED: Database of Evolutionary Distances. Nucleic Acids Res 2005, 33:0442-446.
-
-
-
|