-
1
-
-
0032545933
-
Potent and specific genetic interference by doublestranded RNA in Caenorhabditis elegans
-
Fire A., Xu S., Montgomery M.K., Kostas S.A., Driver S.E., and Mello C.C. Potent and specific genetic interference by doublestranded RNA in Caenorhabditis elegans. Nature 391 (1998) 806-811
-
(1998)
Nature
, vol.391
, pp. 806-811
-
-
Fire, A.1
Xu, S.2
Montgomery, M.K.3
Kostas, S.A.4
Driver, S.E.5
Mello, C.C.6
-
2
-
-
0034737298
-
RNAi: double-stranded RNA directs the ATP-dependent cleavage of mRNA at 21 to 23 nucleotide intervals
-
Zamore P.D., Tuschl T., Sharp P.A., and Bartel D.P. RNAi: double-stranded RNA directs the ATP-dependent cleavage of mRNA at 21 to 23 nucleotide intervals. Cell 101 (2000) 25-33
-
(2000)
Cell
, vol.101
, pp. 25-33
-
-
Zamore, P.D.1
Tuschl, T.2
Sharp, P.A.3
Bartel, D.P.4
-
3
-
-
0035798415
-
ATP requirements and small interfering RNA structure in the RNA interference pathway
-
Nykänen A., Haley B., and Zamore P.D. ATP requirements and small interfering RNA structure in the RNA interference pathway. Cell 107 (2001) 309-321
-
(2001)
Cell
, vol.107
, pp. 309-321
-
-
Nykänen, A.1
Haley, B.2
Zamore, P.D.3
-
4
-
-
0035803583
-
Functional anatomy of siRNAs for mediating efficient RNAi in Drosophila melanogaster embryo lysate
-
Elbashir S.M., Martinez J., Patkaniowska A., Lendeckel W., and Tuschl T. Functional anatomy of siRNAs for mediating efficient RNAi in Drosophila melanogaster embryo lysate. EMBO J. 20 (2001) 6877-6888
-
(2001)
EMBO J.
, vol.20
, pp. 6877-6888
-
-
Elbashir, S.M.1
Martinez, J.2
Patkaniowska, A.3
Lendeckel, W.4
Tuschl, T.5
-
5
-
-
0034683099
-
Sensitive assay of RNA interference in Drosophila and Chinese hamster cultured cells using firefly luciferase gene as target
-
Ui-Tei K., Zenno S., Miyata Y., and Saigo K. Sensitive assay of RNA interference in Drosophila and Chinese hamster cultured cells using firefly luciferase gene as target. FEBS Lett. 479 (2000) 79-82
-
(2000)
FEBS Lett.
, vol.479
, pp. 79-82
-
-
Ui-Tei, K.1
Zenno, S.2
Miyata, Y.3
Saigo, K.4
-
6
-
-
1642273831
-
An algorithm for selection of functional siRNA sequences
-
Amarzguioui M., and Prydz H. An algorithm for selection of functional siRNA sequences. Biochem. Biophys. Res. Commun. 316 (2004) 1050-1058
-
(2004)
Biochem. Biophys. Res. Commun.
, vol.316
, pp. 1050-1058
-
-
Amarzguioui, M.1
Prydz, H.2
-
7
-
-
0142165224
-
Functional siRNAs and miRNAs exhibit strand bias
-
Khvorova A., Reynolds A., and Jayasena S. Functional siRNAs and miRNAs exhibit strand bias. Cell 115 (2003) 209-216
-
(2003)
Cell
, vol.115
, pp. 209-216
-
-
Khvorova, A.1
Reynolds, A.2
Jayasena, S.3
-
8
-
-
3542992506
-
An effective method for selecting siRNA target sequences in mammalian cells
-
Takasaki S., Kotani S., and Konagaya A. An effective method for selecting siRNA target sequences in mammalian cells. Cell Cycle 3 6 (2004) 790-795
-
(2004)
Cell Cycle
, vol.3
, Issue.6
, pp. 790-795
-
-
Takasaki, S.1
Kotani, S.2
Konagaya, A.3
-
10
-
-
23444437819
-
Design of a genome-wide siRNA library using an artificial neural network
-
Huesken D., Lange J., Mickanin C., Weiler J., Asselbergs F., Warner J., Meloon B., Engel S., Rosenberg A., Cohen D., Labow M., Reinhardt M., Natt F., and Hall J. Design of a genome-wide siRNA library using an artificial neural network. Nat. Biotechnol. 23 (2005) 995-1001
-
(2005)
Nat. Biotechnol.
, vol.23
, pp. 995-1001
-
-
Huesken, D.1
Lange, J.2
Mickanin, C.3
Weiler, J.4
Asselbergs, F.5
Warner, J.6
Meloon, B.7
Engel, S.8
Rosenberg, A.9
Cohen, D.10
Labow, M.11
Reinhardt, M.12
Natt, F.13
Hall, J.14
-
11
-
-
33845631509
-
Integrated siRNA design based on surveying of features associated with high RNAi effectiveness
-
Gong W., Ren Y., Xu Q., Wang Y., Lin D., Zhou H., and Li T. Integrated siRNA design based on surveying of features associated with high RNAi effectiveness. BMC Bioinformatics 7 (2006) 516-537
-
(2006)
BMC Bioinformatics
, vol.7
, pp. 516-537
-
-
Gong, W.1
Ren, Y.2
Xu, Q.3
Wang, Y.4
Lin, D.5
Zhou, H.6
Li, T.7
-
13
-
-
33645822531
-
siRecords: an extensive database of mammalian siRNAs with efficacy ratings
-
Ren Y., Gong W., Xu Q., Zheng X., Lin D., Wang Y., and Li T. siRecords: an extensive database of mammalian siRNAs with efficacy ratings. Bioinformatics 22 (2006) 1027-1028
-
(2006)
Bioinformatics
, vol.22
, pp. 1027-1028
-
-
Ren, Y.1
Gong, W.2
Xu, Q.3
Zheng, X.4
Lin, D.5
Wang, Y.6
Li, T.7
-
14
-
-
22144489833
-
RNAi: the nuts and bolts of the RISC machine
-
Fillipowicz W. RNAi: the nuts and bolts of the RISC machine. Cell 122 (2005) 17-20
-
(2005)
Cell
, vol.122
, pp. 17-20
-
-
Fillipowicz, W.1
-
15
-
-
10744225153
-
Asymmetry in the assembly of the RNAi enzyme complex
-
Schwarz D.S., Hutvagner G., Du T., Xu Z., Aronin N., and Zamore P.D. Asymmetry in the assembly of the RNAi enzyme complex. Cell 115 (2003) 199-208
-
(2003)
Cell
, vol.115
, pp. 199-208
-
-
Schwarz, D.S.1
Hutvagner, G.2
Du, T.3
Xu, Z.4
Aronin, N.5
Zamore, P.D.6
-
16
-
-
0035283171
-
Statistical prediction of single-stranded regions in RNA secondary structure and application to predicting effective antisense target sites and beyond
-
Ding Y., and Lawrence C.E. Statistical prediction of single-stranded regions in RNA secondary structure and application to predicting effective antisense target sites and beyond. Nucleic Acids Res. 29 (2001) 1034-1046
-
(2001)
Nucleic Acids Res.
, vol.29
, pp. 1034-1046
-
-
Ding, Y.1
Lawrence, C.E.2
-
17
-
-
0038521255
-
The efficacy of small interfering RNAs targeted to the type 1 insulin-like growth factor receptor (IGF1R) is influenced by secondary structure in the IGF1R transcript
-
Bohula E.A., Salisbury A.J., Sohail M., Playford M.P., Riedemann J., Southern E.M., and Macaulay V.M. The efficacy of small interfering RNAs targeted to the type 1 insulin-like growth factor receptor (IGF1R) is influenced by secondary structure in the IGF1R transcript. J. Biol. Chem. 278 18 (2003) 15991-15997
-
(2003)
J. Biol. Chem.
, vol.278
, Issue.18
, pp. 15991-15997
-
-
Bohula, E.A.1
Salisbury, A.J.2
Sohail, M.3
Playford, M.P.4
Riedemann, J.5
Southern, E.M.6
Macaulay, V.M.7
-
18
-
-
0042161890
-
The activity of siRNA in mammalian cells is related to structural target accessibility: a comparison with antisense oligonucleotides
-
Kretschmer-Kazemi F.R., and Sczakiel G. The activity of siRNA in mammalian cells is related to structural target accessibility: a comparison with antisense oligonucleotides. Nucleic Acids Res. 31 15 (2003) 4417-4424
-
(2003)
Nucleic Acids Res.
, vol.31
, Issue.15
, pp. 4417-4424
-
-
Kretschmer-Kazemi, F.R.1
Sczakiel, G.2
-
19
-
-
0037089135
-
Positional effects of short interfering RNAs targeting the human coagulation trigger tissue factor
-
Holen T., Amarzguioui M., Wiiger M.T., Babaie E., and Prydz H. Positional effects of short interfering RNAs targeting the human coagulation trigger tissue factor. Nucleic Acids Res. 30 8 (2002) 1757-1766
-
(2002)
Nucleic Acids Res.
, vol.30
, Issue.8
, pp. 1757-1766
-
-
Holen, T.1
Amarzguioui, M.2
Wiiger, M.T.3
Babaie, E.4
Prydz, H.5
-
20
-
-
1542336952
-
Rational siRNA design for RNA interference
-
Reynolds A., Leake D., Boese Q., Scaringe S., and Marshall W.S. Rational siRNA design for RNA interference. Nat. Biotechnol. 22 (2004) 326-330
-
(2004)
Nat. Biotechnol.
, vol.22
, pp. 326-330
-
-
Reynolds, A.1
Leake, D.2
Boese, Q.3
Scaringe, S.4
Marshall, W.S.5
-
21
-
-
1642491747
-
Enhancement of RNAi activity by improved siRNA duplexes
-
Hohjoh H. Enhancement of RNAi activity by improved siRNA duplexes. FEBS Lett. 557 (2004) 193-198
-
(2004)
FEBS Lett.
, vol.557
, pp. 193-198
-
-
Hohjoh, H.1
-
22
-
-
2342564353
-
A library of siRNA duplexes targeting the phosphoinositide 3-kinase pathway: determinants of gene silencing for use in cell-based screens
-
Hsieh A.C., Ronghai B., Manola J., Vazquez F., Bare O., Khvorova A., Scaringe S., and Sellers W.R. A library of siRNA duplexes targeting the phosphoinositide 3-kinase pathway: determinants of gene silencing for use in cell-based screens. Nucleic Acids Res. 32 (2004) 893-901
-
(2004)
Nucleic Acids Res.
, vol.32
, pp. 893-901
-
-
Hsieh, A.C.1
Ronghai, B.2
Manola, J.3
Vazquez, F.4
Bare, O.5
Khvorova, A.6
Scaringe, S.7
Sellers, W.R.8
-
23
-
-
1642346273
-
Guidelines for the selection of highly effective siRNA sequences for mammalian and chick RNA interference
-
Ui-Tei K., Naito Y., Takahashi F., Haraguchi T., Ohki-Hamazaki H., Juni A., Ueda R., and Saigo K. Guidelines for the selection of highly effective siRNA sequences for mammalian and chick RNA interference. Nucleic Acids Res. 32 (2004) 936-948
-
(2004)
Nucleic Acids Res.
, vol.32
, pp. 936-948
-
-
Ui-Tei, K.1
Naito, Y.2
Takahashi, F.3
Haraguchi, T.4
Ohki-Hamazaki, H.5
Juni, A.6
Ueda, R.7
Saigo, K.8
-
24
-
-
0029968822
-
Improved nearestneighbor parameters for predicting DNA duplex stability
-
Xia T., SantaLucia J., Allawi H.T., and Seneviratne P.A. Improved nearestneighbor parameters for predicting DNA duplex stability. Biochemistry 35 (1996) 3555-3562
-
(1996)
Biochemistry
, vol.35
, pp. 3555-3562
-
-
Xia, T.1
SantaLucia, J.2
Allawi, H.T.3
Seneviratne, P.A.4
-
25
-
-
34249772381
-
Fast folding and comparison of RNA secondary structures
-
Hofacker I.L., Fontana W., Stadler P.F., Bonhoeffer S., Tacker M., and Schuster P. Fast folding and comparison of RNA secondary structures. Monatsh. Chem. 125 (1994) 167-188
-
(1994)
Monatsh. Chem.
, vol.125
, pp. 167-188
-
-
Hofacker, I.L.1
Fontana, W.2
Stadler, P.F.3
Bonhoeffer, S.4
Tacker, M.5
Schuster, P.6
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