Genetic variability of Trypanosoma evansi isolates detected by inter-simple sequence repeat anchored-PCR and microsatellite

Veterinary Parasitology

Volumn 147, Issue 1-2, 2007, Pages 51-60

  Njiru, Z K ^a,b   Constantine, C C ^c   Gitonga, P K ^b   Thompson, R C A ^a   Reid, S A ^a  

^a MURDOCH UNIVERSITY   (Australia)

^b KENYA AGRICULTURAL RESEARCH INSTITUTE   (Kenya)

^c UNIVERSITY OF MELBOURNE   (Australia)

Author keywords

Genetics; Inter simple sequence repeat (ISSR); Microsatellites; Trypanosoma evansi; Trypanozoon

Indexed keywords

MICROSATELLITE DNA; MINICIRCLE DNA;

ALLELE; ANALYTIC METHOD; ARTICLE; CONTROLLED STUDY; DNA POLYMORPHISM; GENE LOCUS; GENETIC DISTANCE; GENETIC VARIABILITY; INTER SIMPLE SEQUENCE REPEAT; NONHUMAN; PARASITE IDENTIFICATION; PHYLOGENETIC TREE; POLYMERASE CHAIN REACTION; TRYPANOSOMA EVANSI;

AFRICA; ANIMALS; ASIA; BUFFALOES; CAMELS; CATTLE; CATTLE DISEASES; MICE; MICROSATELLITE REPEATS; PHYLOGENY; POLYMERASE CHAIN REACTION; REPETITIVE SEQUENCES, NUCLEIC ACID; TRYPANOSOMA; TRYPANOSOMIASIS; VARIATION (GENETICS);

TRYPANOSOMA EVANSI; TRYPANOZOON;

EID: 34249023761     PISSN: 03044017     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.vetpar.2007.03.010     Document Type: Article

References (43)

1. Abo-Shehada M.N., Anshassi H., Mustafa G., and Amr Z. Prevalence of Surra among camels and horses in Jordan. Prev. Vet. Med. 38 (1999) 289-293
2. Biteau N., Bringaud F., Gibson P., Truc P., and Baltz T. Characterization of Trypanozoon isolates using a repeated coding sequence and microsatellite markers. Mol. Biochem. Parasitol. 105 (2000) 185-201
3. Blair M.W., Panaud O., and Mccouch S.R. Inter-simple sequence repeats (ISSR) amplification for analysis of microsatellite motif frequency and fingerprinting in rice (Oryza sativa L.). Theor. Appl. Genet. 98 (1999) 780-792
4. Campos Y.R., Carvalho O.S., Goveia C.O., and Romanha A.J. Genetic variability of the main intermediate host of the Schistosoma mansoni in Brazil. Biomphalaria glabrata (Gastropoda: Planorbidae) assessed by SSR-PCR. Acta Trop. 83 (2002) 19-27
5. Delafosse A., and Doutoum A.A. Prevalence of Trypanosoma evansi infection and associated risk factors in camels in eastern Chad. Vet. Parasitol. 119 (2004) 155-164
6. De Menezes V.T., Queiroz A.O., Gomes M.A., Marques M.A., and Jansen A.M. Trypanosoma evansi in inbred and Swiss-Webster mice: distinct aspects of pathogenesis. Parasitol. Res. 94 (2004) 193-200
7. Esselman E.J., Crawford D.J., Brauner S., Stuessy T.F., Anderson G.J., and Silva O.M. RAPD marker diversity within and divergence among species of Dendroseris (Asteraceae: Lactuceae). Am. J. Bot. 87 (2000) 591-596
8. Gibson W.C., Wilson A.J., and Moloo S.K. Characterisation of Trypanosoma (Trypanozoon) evansi from camels in Kenya using isoenzyme electrophoresis. Res. Vet. Sci. 34 (1983) 114-118
9. Gomes M.L., Macedo A.M., Pena S.D.J., and Chiari E. Genetic relationship between Trypanosoma cruzi strains isolated from chronic chagasic patients in southern Brazil as revealed by RAPD and SSR-PCR analysis. Acta Trop. 69 (1998) 99-109
10. Hamada H., Petrino M.G., and Kukunaga T.A. Novel repeated element with Z-DNA forming potential is widely found in evolutionary diverse eukaryotic genomes. Proc. Natl. Acad. Sci. 79 (1982) 6465-6469
11. Herrera H.M., Davila A.M., Norek A., Abreu U.G., Souza S.S., D'Andrea P.S., and Jansen A.M. Enzootiology of Trypanosoma evansi in Pantanal. Brazil. Vet. Parasitol. 125 (2004) 263-275
12. Jenni L., Marti S., Schweizer J., Betschart B., Le Page R.W., Wells J.M., Tait A., Paindavoine P., Pays E., and Steinert M. Hybrid formation between African trypanosomes during cyclical transmission. Nature 322 (1986) 173-175
13. Kojima T., Nagaoka T., and Ogihara Y. Genetic linkage map of ISSR and RAPD markers in Einkorn wheat in relation to that of RFLP markers. Theor. Appl. Genet. 96 (1998) 37-45
14. Li F.J., Gasser R.B., Zheng J.Y., Claes F., Zhu X.Q., and Lun Z.R. Application of multiple DNA fingerprinting techniques to study the genetic relationships among three members of the subgenus Trypanozoon (Protozoa: Trypanosomatidae). Mol. Cell. Probes. 19 (2005) 400-407
15. Luckins A.G., and Dwinger R.H. Non-tsetse-transmitted animal trypanosomiasis. In: Holmes P.H., and Miles M.A. (Eds). The Trypanosomiases (2004), CABI Publishing 269-282
16. Lun Z.R., Fang Y., Wang C.J., and Brun R. Trypanosomiasis of domestic animals in China. Parasitol. Today 9 (1993) 41-45
17. Lun Z.R., Li A.X., Chen X.G., Lu L.X., and Zhu X.Q. Molecular profiles of Trypanosoma brucei, T. evansi and T. equiperdum stocks revealed by the random amplified polymorphic DNA method. Parasitol. Res. 92 (2004) 335-340
18. Macedo A.M., Pimenta J.R., Aguiar R.S., Melo A.I., Chiari E., Zingales B., Pena S.D., and Oliveira R.P. Usefulness of microsatellites typing in population genetic studies of Trypanosoma cruzi. Mem. Inst. Oswaldo. Cruz. 96 (2001) 407-413
19. Masiga D.K., Ndung'u K., Tweedie A., Tait A., and Turner C.M. Trypanosoma evansi: Genetic variability detected using amplified restriction fragment length polymorphism (AFLP) and random amplified polymorphic DNA (RAPD) analysis of Kenyan isolates. Exp. Parasitol. 114 (2006) 147-153
20. Mattioni C., Casasoli M., Gonzalez M., Ipinza R., and Villani F. Comparison of ISSR and RAPD markers to characterize three Chilean Nothofagus species. Theo. Appl. Genet. 104 (2002) 1064-1070
21. Nagaoka T., and Ogihara Y. Applicability of inter-simple sequence repeat polymorphisms in wheat for use as DNA markers in comparison to RFLP and RAPD markers. Theor. Appl. Genet. 94 (1997) 597-602
22. Ngaira J.M., Njagi E.N.M., Ngeranwa J.J.N., and Olembo N.K. PCR amplification of RoTat 1. 2 VSG gene in Trypanosoma evansi isolates in Kenya. Vet. Parasitol. 120 (2004) 23-33
23. Ngaira J.M., Olembo N.K., Njagi E.N., and Ngeranwa J.J. The detection of non-RoTat 1.2 Trypanosoma evansi. Exp. Parasitol. 110 (2005) 30-38
24. Njiru Z.K., Constantine C.C., Ndung'u J.M., Robertson I., Okaye S., Thompson R.C.A., and Reid S.A. Detection of Trypanosoma evansi in camels using PCR and CATT/T. evansi tests in Kenya. Vet. Parasitol. 124 (2004) 187-199
25. Njiru Z.K., Constantine C.C., Masiga D.K., Reid S.A., Thompson R.C., and Gibson W.C. Characterization of Trypanosoma evansi type B. Infect. Genet. Evol. 6 (2006) 292-300
26. Oliveira R.P., Macedo A.M., Chiari E., and Pena S.D.J. An alternative approach to evaluating the intraspecific genetic variability of parasites. Parasitol. Today 13 (1997) 196-200
27. Omanwar S., Rao J.R., Basagoudanavar S.H., Singh R.K., and Butchaiah G. Direct and sensitive detection of Trypanosoma evansi by polymerase chain reaction. ActaVet. Hung. 47 (1999) 351-359
28. Ou Y.C., Giroud C., and Baltz T. Kinetoplast DNA analysis of four Trypanosoma evansi strains. Mol. Biochem. Parasitol. 46 (1991) 97-102
29. Penner G.A., Bush A., Wise R., Kim W., Domier L., Kasha K., Laroche A., Scoles G., Molnar S.J., and Fedak G. Reproducibility of random amplified polymorphic DNA (RAPD) analysis among laboratories. PCR methods App. 2 (1993) 341-345
30. Queiroz A.O., Cabello P.H., and Jansen A.M. Biological and biochemical characterization of isolates of Trypanosoma evansi from Pantanal of Matogrosso-Brazil. Vet. Parasitol. 92 (2000) 107-118
31. Reid S.A. Trypanosoma evansi control and containment in Australasia. Trends Parasitol. 18 (2002) 219-224
32. Roberts, A.R., Withers, P. C., 2004. StatistiXL Version 1.4. http://www.statistixl.com.
33. Schwenkenbecher J.M., Frohlich C., Gehre F., Schnur L.F., and Schonian G. Evolution and conservation of microsatellite markers for Leishmania tropica. Infect. Genet. Evol. 4 (2004) 99-105
34. Sica M., Gamba G., Montieri S., Gaudio L., and Aceto S. ISSR markers show differentiation among populations of Asparagus acutifolius L. BMC genetics 6 (2005) 1-7
35. Songa E.B., Paindavoine P., Wittouck E., Viseshakul N., Muldermans S., Steinert M., and Hamers R. Evidence for kinetoplast and nuclear DNA homogeneity in Trypanosoma evansi isolates. Mol. Biochem. Parasitol. 43 (1990) 167-179
36. Stevens J.R., Nunes V.L., Lanham S.M., and Oshiro E.T. Isoenzyme characterization of Trypanosoma evansi isolated from capybaras and dogs in Brazil. Acta Trop. 46 (1989) 213-222
37. Truc P., Gibson W., and Herder S. Genetic characterization of Trypanosoma evansi isolated from a patient in India. Infect. Genet. Evol. (2006) online publication, August 23
38. Van Belkum A., Scherer S., van Alphen L., and Verbrugh H. Short sequence DNA repeats in prokaryotic genomes. Microbiol. Mol. Biol. Rev. 62 (1998) 275-293
39. Ventura R.M., Takata C.S., Silva R.A., Nunes V.L., Takeda G.F., and Teixeira M.M. Molecular and morphological studies of Brazilian Trypanosoma evansi isolates: the total absence of kDNA in trypanosomes from both laboratory isolates and naturally infected domestic and wild mammals. Parasitology 86 (2000) 1289-1298
40. Volpini A.C., Passos V.M., and Romanha A.J. Attempt to differentiate Leishamnia (Leishamania) amazonensis, L. (L.) chagashi. Leishmania (Viannia) braziliensis and L. (V.) guyanensis using the SSR-PCR technique. Parasitol. Res. 87 (2001) 1056-1059
41. World Health Organisation. A new form of human trypanosomiasis in India, Description of the first human case in the world caused by Trypanosoma evansi. Wkly. Epidemiol. Rec. 80 (2005) 62-63
42. Yap, I.V., Nelson, R.J., 1996. WINBOOT: A program for performing bootstrap analysis of binary data to determine the confidence limits of UPGMA-based dendrograms IRRI Discussion paper series No. 14, International Rice Research Institute, Manila, Philippines.
43. Zietkiewicz E., Rafalski A., and Labuda D. Genome fingerprinting by simple sequence repeat (SSR)-anchored polymerase chain reaction amplification. Genomics 20 (1994) 176-183