RAPD markers for the identification of yield traits in tomatoes under heat stress via bulked segregant analysis

Hereditas

Volumn 143, Issue 2006, 2006, Pages 142-154

  Lin, Kuan Hung ^a   Lo, Hsiao Feng ^a   Lee, Shao Pei ^a   Kuo, C George ^b   Chen, Jen Tzu ^b   Yeh, Wei Lun ^a  

^a CHINESE CULTURE UNIVERSITY   (Taiwan)

^b AVRDC THE WORLD VEGETABLE CENTER   (Taiwan)

Author keywords

[No Author keywords available]

Indexed keywords

PLANT DNA;

ARTICLE; CONTROLLED STUDY; CORRELATION ANALYSIS; FLOWER; FRUIT; GENE IDENTIFICATION; GENE SEGREGATION; GENETIC CODE; GENETIC LINKAGE; GENETIC MARKER; GENETIC SCREENING; GENETIC TRAIT; GENOTYPE; HEAT SENSITIVITY; HEAT STRESS; HEAT TOLERANCE; INBREEDING; NONHUMAN; NUCLEOTIDE SEQUENCE; PLANT BREEDING; PLANT GENETICS; PLANT GROWTH; RANDOM AMPLIFIED POLYMORPHIC DNA; RELIABILITY; SCORING SYSTEM; SEGREGATION ANALYSIS; SUMMER; TOMATO; WEIGHT;

GENETIC MARKERS; HEAT; LYCOPERSICON ESCULENTUM; PHENOTYPE; POLYMORPHISM, GENETIC; QUANTITATIVE TRAIT LOCI; RANDOM AMPLIFIED POLYMORPHIC DNA TECHNIQUE;

LYCOPERSICON ESCULENTUM;

EID: 34248208700     PISSN: 00180661     EISSN: 16015223     Source Type: Journal    
DOI: 10.1111/j.2006.0018-0661.01938.x     Document Type: Article

References (35)

1. AVRDC 1986. Asian Vegetable Research and Development Center, Progress Report. Shenhua, Taiwan.
2. AVRDC 1993. Asian Vegetable Research and Development Center Report. AVRDC, Taiwan.
3. AVRDC 1997. Asian Vegetable Research and Development Center Report. AVRDC, Taiwan.
4. Bar-Tsue, A., Rudich, J. and Bravdo, B. 1985. High temperature effects on CO2 gas exchange in heat-tolerant and sensitive tomatoes. - J. Am. Soc. Hort. Sci. 110: 582-586.
5. Brouwer, D. J. and Clair, D. A. 2004. Fine mapping of three quantitative trait loci for late blight resistance in tomato using near isogenic lines (NILs) and sub-NILs. - Theor. Appl. Genet. 108: 628-638.
6. Causse, M., Duffe, P., Buret, M. et al. 2004. A genetic map of candidate genes and QTL involved in tomato fruit size and composition. - J. Exp. Bot. 55: 1671-1685.
7. Chague, V., Mercier, J. C., Guenard, M. et al. 1997. Identification of RAPD markers linked to a locus involved in quantitative resistance to TYLCV in tomato by bulked segregant analysis. - Theor. Appl. Genet. 95: 671-677.
8. Chaim, B. A., Paran, I., Grube, I. M. et al. 2001. QTL mapping of fruit-related traits in pepper (Capsicum annuum). - Theor. Appl. Genet. 102: 1016-1028.
9. Dinar, M. and Rudich, J. 1985. Effect of heat stress on assimilate partitioning in tomato. - Ann. Botany 56: 239-248.
10. Doyle, J. J. and Doyle, L.L. 1990. Isolation of plant DNA from fresh tissue. - Focus 12: 13-15.
11. Foolad, M. R. and Lin, G. 2001. Genetic analysis of cold tolerance during vegetative growth in tomato, Lycopesicon esculentum Mill. - Euphytica 122: 105-111.
12. Freiab, A., Blaira, M. W., Cardonaa, M. et al. 2005. QTL mapping of resistance to thrips palmi Karny in common bean. - Crop Sci. 45: 379-387.
13. Georgiady, M. S., Whitkus, R. W. and Lord, E. M. 2002. Genetic analysis of traits distinguishing outcrossing and self-pollinating forms of currant tomato, Lycopersicon pimpinellifolium (Jusl.) Mill. - Genetics 161: 333-344.
14. Giovanni, C., Dell'Orco, P., Bruno, A. et al. 2004. Identification of PCR-based markers (RAPD, AFLP) linked to a novel powdery mildew resistance gene (ol-2) in tomato. - Plant Sci. 166: 41-48.
15. Jahn, M., Paran, I., Hoffmann, K. et al. 2000. Genetic mapping of the Tsw locus for resistance to the tospovirus tomato spotted wilt virus in Capsicum spp. and its relationship to the Sw-5 gene for resistance to the same pathogen in tomato. - Mol. Plant-Microbe Interact. 13: 673-682.
16. Kelley, J. D., Gepts, P., Miklas, P. N. et al. 2003. Tagging and mapping of genes and QTL and molecular marker-assisted selection for traits of economic importance in bean and cowpea. - Field Crops Res. 82: 135-154.
17. Knaap, E. V. and Tanksley, S. D. 2003. The making of a bell pepper-shaped tomato fruit: Identification of loci controlling fruit morphology in Yellow Stuffer tomato. - Theor. Appl. Genet. 107: 139-147.
18. Kuo, C. G. and Tsai, C. T. 1984. Alternation by high temperature of auxin and gibberellin concentration in the floral buds, flowers, and young fruit of tomato. - Hort. Sci. 19: 870-872.
19. Kuo, C. G., Chen, H. M and Chen, H. C. 1986. Plant hormones in tomato fruit set and develop at high temperatures. - In: Plant growth regulators in agriculture. AVRDC, Taiwan, p. 53-70.
20. Lecomte, L., Duff'e, P., Buret, M. et al. 2004. Marker-assisted introgression of five QTLs controlling fruit quality traits into three tomato lines revealed interactions between QTLs and genetic backgrounds. - Theor. Appl. Genet. 109: 658-668.
21. Lippmana, Z. and Tanksley, S. D. 2001. Dissecting the genetic pathway to extreme fruit size in tomato using a cross between the small-fruited wild species Lycopersicon pimpinellifolium and L. esculentum var. Giant Heirloom. - Genetics 158: 413-422.
22. Lohar, D. P. and Peet, W. E. 1998. Floral characteristics of heat-tolerance and heat-sensitive tomato cultivars at high temperature. - Hort. Sci. 73: 53-60.
23. Mackay, I. J. and Caligari, P. D. S. 2000. Efficiencies of F2 and backcross generations for bulked segregant analysis using dominant markers. - Crop Sci. 40: 626-630.
24. Michelmore, R. W., Paran, I. and Kesseli, R. V. 1991. Identification of markers linked to disease-resistance genes by bulked segregant analysis: a rapid method to detect markers in specific genomic regions by using segregating populations. - Proc. Natl Acad. Sci. USA 88: 9828-9832.
25. Millan, T., Rubio, J., Iruela, M. K. et al. 2003. Markers associated with Ascochyta blight resistance in chickpea and their potential in marker-assisted selection. - Field Crops Res. 84: 373-384.
26. Monforte, A. J., Asins, M. J. and Carbonell, E. A. 1997. Salt tolerance in Lycopersicon species. VI. Genotype-by-salinity interaction in quantitative trait loci detection: Constitutive and response QTLs. - Theor. Appl. Genet. 95: 706-713.
27. Paterson, A. H., Damon, S., Hewitt, J. D. et al. 1991. Mendelian factors underlying quantitative traits in tomato: Comparison across species, generations and environments. - Genetics 127: 181-197.
28. Rick, C. M. 1988. Tomato-like nightshades: Affinities, autoecolory and breeder's opportunities. - Econ. Bot. 42: 145-154.
29. Saliba-Colombani, V., Causse, M., Langlois, D. et al. 2001. Genetic analysis of organoleptic quality in fresh market tomato. 1. Mapping QTLs for physical and chemical traits. - Theor. Appl. Genet. 102: 259-272.
30. Sato, S., Peet, M. M. and Gardner, R. G. 2004. Altered flower retention and developmental patterns in 9 tomato cultivars under elevated temperature. - Hort. Sci. 101: 95-101.
31. Suenaga, K., Khairallah, M., William, H. M. et al. 2005. A new intervarietal linkage map and its application for quantitative trait locus analysis of "gigas" features in bread wheat. - Genome 48: 65-75.
32. Williams, J. G., Kubelik, A. R., Rafalski, J. A. et al. 1990. DNA polymorphisms amplified by arbitrary primers are useful as genetic markers. - Nucleic Acids Res. 18: 6531-6535.
33. Zhang, Q., Shen, B. Z., Dai, B. Z. et al. 1994. Using bulked extremes and recessive class to map genes for photoperiod-sensitive genetic make sterility in rice. - Proc, Natl Acad. Sci. USA 91: 8675-8679.
34. Zhang, H. B., Budiman, M. A.and and Wing, R. A. 2000. Genetic mapping of jointless-2 to tomato chromosome 12 using RFLP and RAPD markers. - Theor. Appl. Genet. 100: 1183-1189.
35. Zhang, Y. and Stommel, J. R. 2000. RAPD and AFLP tagging and mapping of Beta (B) and Beta modifier (MoB), two genes which influence β-carotene accumulation in fruit of tomato (Lycopersicon esculentum Mill.). - Theor. Appl. Genet. 100: 368-375.