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Volumn 175, Issue 2, 2007, Pages 819-826

Mitochondrial genome sequence evolution in chlamydomonas

Author keywords

[No Author keywords available]

Indexed keywords

MITOCHONDRIAL DNA; RIBOSOME RNA; MITOCHONDRIAL PROTEIN; NUCLEOTIDE;

EID: 34247871378     PISSN: 00166731     EISSN: 00166731     Source Type: Journal    
DOI: 10.1534/genetics.106.063156     Document Type: Article
Times cited : (40)

References (65)
  • 1
    • 0344719444 scopus 로고    scopus 로고
    • Evolution of mitochondrial gene content: Gene loss and transfer to the nucleus
    • ADAMS, K. L., and J. D. PALMER, 2003 Evolution of mitochondrial gene content: gene loss and transfer to the nucleus. Mol. Phylogenet. Evol. 29: 380-395.
    • (2003) Mol. Phylogenet. Evol , vol.29 , pp. 380-395
    • ADAMS, K.L.1    PALMER, J.D.2
  • 2
    • 0032127258 scopus 로고    scopus 로고
    • Reductive evolution of resident genomes
    • ANDERSSON, S. G., and C. G. KURLAND, 1998 Reductive evolution of resident genomes. Trends Microbiol. 6: 263-268.
    • (1998) Trends Microbiol , vol.6 , pp. 263-268
    • ANDERSSON, S.G.1    KURLAND, C.G.2
  • 3
    • 0034076858 scopus 로고    scopus 로고
    • Why mitochondrial genes are most often found in nuclei
    • BERG, O. G., and C. G. KURLAND, 2000 Why mitochondrial genes are most often found in nuclei. Mol. Biol. Evol. 17: 951-961.
    • (2000) Mol. Biol. Evol , vol.17 , pp. 951-961
    • BERG, O.G.1    KURLAND, C.G.2
  • 4
    • 0024277968 scopus 로고
    • Scrambled ribosomal RNA gene pieces in Chlamydomonas reinhardtii mitochondrial DNA
    • BOER, P. H., and M. W. GRAY, 1988a Scrambled ribosomal RNA gene pieces in Chlamydomonas reinhardtii mitochondrial DNA. Cell 55: 399-411.
    • (1988) Cell , vol.55 , pp. 399-411
    • BOER, P.H.1    GRAY, M.W.2
  • 5
    • 0024120071 scopus 로고
    • Genes encoding a subunit of respiratory NADH dehydrogenase (ND1) and a reverse transcriptase-like protein (RTL) are linked to ribosomal RNA gene pieces in Chlamydomonas reinhardtii mitochondrial DNA
    • BOER, P. H., and M. W. GRAY, 1988b Genes encoding a subunit of respiratory NADH dehydrogenase (ND1) and a reverse transcriptase-like protein (RTL) are linked to ribosomal RNA gene pieces in Chlamydomonas reinhardtii mitochondrial DNA. EMBO J. 7: 3501-3508.
    • (1988) EMBO J , vol.7 , pp. 3501-3508
    • BOER, P.H.1    GRAY, M.W.2
  • 6
    • 0024236046 scopus 로고
    • Transfer RNA genes and the genetic code in Chlamydomonas reinhardtii mitochondria
    • BOER, P. H., and M. W. GRAY, 1988c Transfer RNA genes and the genetic code in Chlamydomonas reinhardtii mitochondria. Curr. Genet. 14: 583-590.
    • (1988) Curr. Genet , vol.14 , pp. 583-590
    • BOER, P.H.1    GRAY, M.W.2
  • 7
    • 0025761166 scopus 로고
    • Short dispersed repeats localized in spacer regions of Chlamydomonas reinhardtii mitochondrial DNA
    • BOER, P. H., and M. W. GRAY, 1991 Short dispersed repeats localized in spacer regions of Chlamydomonas reinhardtii mitochondrial DNA. Curr. Genet. 19: 309-312.
    • (1991) Curr. Genet , vol.19 , pp. 309-312
    • BOER, P.H.1    GRAY, M.W.2
  • 8
    • 0020328686 scopus 로고
    • Mitochondrial DNA sequences of primates: Tempo and mode of evolution
    • BROWN, W. M., E. M. PRAGER, A. WANG and A. C. WILSON, 1982 Mitochondrial DNA sequences of primates: tempo and mode of evolution. J. Mol. Evol. 18: 225-239.
    • (1982) J. Mol. Evol , vol.18 , pp. 225-239
    • BROWN, W.M.1    PRAGER, E.M.2    WANG, A.3    WILSON, A.C.4
  • 9
    • 4644299619 scopus 로고    scopus 로고
    • Evolution of the mitochondrial genome: Protist connections to animals, fungi and plants
    • BULLERWELL, C. E., and M. W. GRAY, 2004 Evolution of the mitochondrial genome: protist connections to animals, fungi and plants. Curr. Opin. Microbiol. 7: 528-534.
    • (2004) Curr. Opin. Microbiol , vol.7 , pp. 528-534
    • BULLERWELL, C.E.1    GRAY, M.W.2
  • 10
    • 0021348482 scopus 로고
    • Polymorphic sites and the mechanism of evolution in human mitochondrial DNA
    • CANN, R. L., W. M. BROWN and A. C. WILSON, 1984 Polymorphic sites and the mechanism of evolution in human mitochondrial DNA. Genetics 106: 479-499.
    • (1984) Genetics , vol.106 , pp. 479-499
    • CANN, R.L.1    BROWN, W.M.2    WILSON, A.C.3
  • 11
    • 2942571539 scopus 로고    scopus 로고
    • The comparative RNA web (CRW) site: An online database of comparative sequence and structure information for ribosomal, intron, and other RNAs
    • CANNONE, J. J., S. SUBRAMANIAN, M. N. SCHNARE, J. R. COLLETT, L. M. D'SOUZA et al., 2002 The comparative RNA web (CRW) site: an online database of comparative sequence and structure information for ribosomal, intron, and other RNAs. BMC Bioinformatics 3: 2.
    • (2002) BMC Bioinformatics , vol.3 , pp. 2
    • CANNONE, J.J.1    SUBRAMANIAN, S.2    SCHNARE, M.N.3    COLLETT, J.R.4    D'SOUZA, L.M.5
  • 12
    • 11144236816 scopus 로고    scopus 로고
    • Mitochondrial substitution rates are extraordinarily elevated and variable in a genus of flowering plants
    • CHO, Y., J. P. MOWER, Y. L. QIU and J. D. PALMER, 2004 Mitochondrial substitution rates are extraordinarily elevated and variable in a genus of flowering plants. Proc. Natl. Acad. Sci. USA 101: 17741-17746.
    • (2004) Proc. Natl. Acad. Sci. USA , vol.101 , pp. 17741-17746
    • CHO, Y.1    MOWER, J.P.2    QIU, Y.L.3    PALMER, J.D.4
  • 13
    • 0025170106 scopus 로고
    • The apocytochrome b gene of Chlamydomonas smithii contains a mobile intron related to both Saccharomyces and Neurospora introns
    • COLLEAUX, L., M. R. MICHEL-WOLWERTZ, R. F. MATAGNE and B. DUJON, 1990 The apocytochrome b gene of Chlamydomonas smithii contains a mobile intron related to both Saccharomyces and Neurospora introns. Mol. Gen. Genet. 223: 288-296.
    • (1990) Mol. Gen. Genet , vol.223 , pp. 288-296
    • COLLEAUX, L.1    MICHEL-WOLWERTZ, M.R.2    MATAGNE, R.F.3    DUJON, B.4
  • 14
    • 0027998965 scopus 로고
    • Comparative structure and genomic organization of the discontinuous mitochondrial ribosomal RNA genes of Chlamydomonas eugametos and Chlamydomonas reinhardtii
    • DENOVAN-WRIGHT, E. M., and R. W. LEE, 1994 Comparative structure and genomic organization of the discontinuous mitochondrial ribosomal RNA genes of Chlamydomonas eugametos and Chlamydomonas reinhardtii. J. Mol. Biol. 241: 298-311.
    • (1994) J. Mol. Biol , vol.241 , pp. 298-311
    • DENOVAN-WRIGHT, E.M.1    LEE, R.W.2
  • 15
    • 0031884735 scopus 로고    scopus 로고
    • Complete sequence of the mitochondrial DNA of Chlamydomonas eugametos
    • DENOVAN-WRIGHT, E. M., A. M. NEDELCU and R. W. LEE, 1998 Complete sequence of the mitochondrial DNA of Chlamydomonas eugametos. Plant Mol. Biol. 36: 285-295.
    • (1998) Plant Mol. Biol , vol.36 , pp. 285-295
    • DENOVAN-WRIGHT, E.M.1    NEDELCU, A.M.2    LEE, R.W.3
  • 16
    • 0035986910 scopus 로고    scopus 로고
    • Mitochondrial genome of the colorless green alga Polytomella parva: Two linear DNA molecules with homologous inverted repeat termini
    • FAN, J., and R. W. LEE, 2002 Mitochondrial genome of the colorless green alga Polytomella parva: two linear DNA molecules with homologous inverted repeat termini. Mol. Biol. Evol. 19: 999-1007.
    • (2002) Mol. Biol. Evol , vol.19 , pp. 999-1007
    • FAN, J.1    LEE, R.W.2
  • 17
    • 0037440092 scopus 로고    scopus 로고
    • Characterization of fragmented mitochondrial ribosomal RNAs of the colorless green alga Polytomella parva
    • FAN, J., M. N. SCHNARE and R. W. LEE, 2003 Characterization of fragmented mitochondrial ribosomal RNAs of the colorless green alga Polytomella parva. Nucleic Acids Res. 31: 769-778.
    • (2003) Nucleic Acids Res , vol.31 , pp. 769-778
    • FAN, J.1    SCHNARE, M.N.2    LEE, R.W.3
  • 18
    • 0002557518 scopus 로고    scopus 로고
    • Molecular clocks and nucleotide substitution rates in higher plants
    • edited by M. K. HECHT, R. J. MACINTYRE and M. T. CLEGG. Plenum Press, New York
    • GAUT, B. S., 1998 Molecular clocks and nucleotide substitution rates in higher plants, pp. 93-120 in Evolutionary Biology, Vol. 30, edited by M. K. HECHT, R. J. MACINTYRE and M. T. CLEGG. Plenum Press, New York.
    • (1998) Evolutionary Biology , vol.30 , pp. 93-120
    • GAUT, B.S.1
  • 19
    • 0028168856 scopus 로고
    • A codon-based model of nucleotide substitution for protein-coding DNA sequences
    • GOLDMAN, N., and Z. YANG, 1994 A codon-based model of nucleotide substitution for protein-coding DNA sequences. Mol. Biol. Evol. 11: 725-736.
    • (1994) Mol. Biol. Evol , vol.11 , pp. 725-736
    • GOLDMAN, N.1    YANG, Z.2
  • 20
    • 0024300787 scopus 로고
    • Organization and expression of algal (Chlamydomonas reinhardtii) mitochondrial DNA
    • GRAY, M. W., and P. H. BOER, 1988 Organization and expression of algal (Chlamydomonas reinhardtii) mitochondrial DNA. Philos. Trans. R. Soc. Lond. B Biol. Sci. 319: 135-147.
    • (1988) Philos. Trans. R. Soc. Lond. B Biol. Sci , vol.319 , pp. 135-147
    • GRAY, M.W.1    BOER, P.H.2
  • 21
    • 0001300429 scopus 로고
    • On the evolutionary origin of the plant mitochondrion and its genome
    • GRAY, M. W., R. CEDERGREN, Y. ABEL and D. SANKOFF, 1989 On the evolutionary origin of the plant mitochondrion and its genome. Proc. Natl. Acad. Sci. USA 86: 2267-2271.
    • (1989) Proc. Natl. Acad. Sci. USA , vol.86 , pp. 2267-2271
    • GRAY, M.W.1    CEDERGREN, R.2    ABEL, Y.3    SANKOFF, D.4
  • 23
    • 0022376704 scopus 로고
    • Dating of the human-ape splitting by a molecular clock of mitochondrial DNA
    • HASEGAWA, M., H. KISHINO and T. YANO, 1985 Dating of the human-ape splitting by a molecular clock of mitochondrial DNA. J. Mol. Evol. 22: 160-174.
    • (1985) J. Mol. Evol , vol.22 , pp. 160-174
    • HASEGAWA, M.1    KISHINO, H.2    YANO, T.3
  • 26
    • 0031665387 scopus 로고    scopus 로고
    • The mitochondrial genome of Chlorogonium elongatum inferred from the complete sequence
    • KROYMANN, J., and K. ZETSCHE, 1998 The mitochondrial genome of Chlorogonium elongatum inferred from the complete sequence. J. Mol. Evol. 47: 431-440.
    • (1998) J. Mol. Evol , vol.47 , pp. 431-440
    • KROYMANN, J.1    ZETSCHE, K.2
  • 27
    • 0342758596 scopus 로고    scopus 로고
    • DNA sequence analysis of the complete mitochondrial genome of the green alga Scenedesmus obliquus: Evidence for UAG being a leucine and UCA being a non-sense codon
    • KÜCK, U., K. JEKOSCH and P. HOLZAMER, 2000 DNA sequence analysis of the complete mitochondrial genome of the green alga Scenedesmus obliquus: evidence for UAG being a leucine and UCA being a non-sense codon. Gene 253: 13-18.
    • (2000) Gene , vol.253 , pp. 13-18
    • KÜCK, U.1    JEKOSCH, K.2    HOLZAMER, P.3
  • 28
    • 3242810318 scopus 로고    scopus 로고
    • MEGA3: Integrated software for molecular evolutionary genetics analysis and sequence alignment
    • KUMAR, S., K. TAMURA and M. NEI, 2004 MEGA3: integrated software for molecular evolutionary genetics analysis and sequence alignment. Brief. Bioinformatics 5: 150-163.
    • (2004) Brief. Bioinformatics , vol.5 , pp. 150-163
    • KUMAR, S.1    TAMURA, K.2    NEI, M.3
  • 29
    • 0037329976 scopus 로고    scopus 로고
    • Mitochondrial genome conformation among CW-group chlorophycean algae
    • LAFLAMME, M., and R. W. LEE, 2003 Mitochondrial genome conformation among CW-group chlorophycean algae. J. Phycol. 39: 213-220.
    • (2003) J. Phycol , vol.39 , pp. 213-220
    • LAFLAMME, M.1    LEE, R.W.2
  • 30
    • 0030914649 scopus 로고    scopus 로고
    • Molecular evolution of angiosperm mitochondrial introns and exons
    • LAROCHE, J., P. LI, L. MAGGIA and J. BOUSQUET, 1997 Molecular evolution of angiosperm mitochondrial introns and exons. Proc. Natl. Acad. Sci. USA 94: 5722-5727.
    • (1997) Proc. Natl. Acad. Sci. USA , vol.94 , pp. 5722-5727
    • LAROCHE, J.1    LI, P.2    MAGGIA, L.3    BOUSQUET, J.4
  • 31
    • 17644368841 scopus 로고    scopus 로고
    • Green algae and the origin of land plants
    • LEWIS, L. A., and R. M. MCCOURT, 2004 Green algae and the origin of land plants. Am. J. Bot. 91: 1535-1556.
    • (2004) Am. J. Bot , vol.91 , pp. 1535-1556
    • LEWIS, L.A.1    MCCOURT, R.M.2
  • 32
    • 0037790948 scopus 로고    scopus 로고
    • Analysis of Chlamydomonas reinhardtii genome structure using large-scale sequencing of regions on linkage groups I and III
    • LI, J. B., S. LIN, H. JIA, H. WU, B. A. ROE et al., 2003 Analysis of Chlamydomonas reinhardtii genome structure using large-scale sequencing of regions on linkage groups I and III. J. Eukaryot. Microbiol. 50: 145-155.
    • (2003) J. Eukaryot. Microbiol , vol.50 , pp. 145-155
    • LI, J.B.1    LIN, S.2    JIA, H.3    WU, H.4    ROE, B.A.5
  • 33
    • 0026860173 scopus 로고
    • CODONS: A microcomputer program for codon usage analysis
    • LLOYD, A. T., and P. M. SHARP, 1992 CODONS: a microcomputer program for codon usage analysis. J. Hered. 83: 239-240.
    • (1992) J. Hered , vol.83 , pp. 239-240
    • LLOYD, A.T.1    SHARP, P.M.2
  • 34
    • 0030034587 scopus 로고    scopus 로고
    • Mutation accumulation in transfer RNAs: Molecular evidence for Muller's ratchet in mitochondrial genomes
    • LYNCH, M., 1996 Mutation accumulation in transfer RNAs: molecular evidence for Muller's ratchet in mitochondrial genomes. Mol. Biol. Evol. 13: 209-220.
    • (1996) Mol. Biol. Evol , vol.13 , pp. 209-220
    • LYNCH, M.1
  • 35
    • 33750344923 scopus 로고    scopus 로고
    • Streamlining and simplification of microbial genome architecture
    • LYNCH, M., 2006 Streamlining and simplification of microbial genome architecture. Annu. Rev. Microbiol. 60: 327-349.
    • (2006) Annu. Rev. Microbiol , vol.60 , pp. 327-349
    • LYNCH, M.1
  • 36
    • 7344254101 scopus 로고    scopus 로고
    • Deleterious mutation accumulation in organelle genomes
    • LYNCH, M., and J. L. BLANCHARD, 1998 Deleterious mutation accumulation in organelle genomes. Genetica 102/103: 29-39.
    • (1998) Genetica , vol.102-103 , pp. 29-39
    • LYNCH, M.1    BLANCHARD, J.L.2
  • 37
    • 33645214213 scopus 로고    scopus 로고
    • Mutation pressure and the evolution of organelle genomic architecture
    • LYNCH, M., B. KOSKELLA and S. SCHAACK, 2006 Mutation pressure and the evolution of organelle genomic architecture. Science 311: 1727-1730.
    • (2006) Science , vol.311 , pp. 1727-1730
    • LYNCH, M.1    KOSKELLA, B.2    SCHAACK, S.3
  • 38
    • 0026826414 scopus 로고
    • The group I intron of apocytochrome b gene from Chlamydomonas smithii encodes a site-specific endonuclease
    • MA, D. P., Y. T. KING, Y. KIM and W. S. LUCKETT, JR., 1992 The group I intron of apocytochrome b gene from Chlamydomonas smithii encodes a site-specific endonuclease. Plant Mol. Biol. 18: 1001-1004.
    • (1992) Plant Mol. Biol , vol.18 , pp. 1001-1004
    • MA, D.P.1    KING, Y.T.2    KIM, Y.3    LUCKETT JR., W.S.4
  • 39
    • 0002160837 scopus 로고    scopus 로고
    • Gene transfer from organelles to the nucleus: How much, what happens, and why?
    • MARTIN, W., and R. G. HERRMANN, 1998 Gene transfer from organelles to the nucleus: How much, what happens, and why? Plant Physiol. 118: 9-17.
    • (1998) Plant Physiol , vol.118 , pp. 9-17
    • MARTIN, W.1    HERRMANN, R.G.2
  • 40
    • 0025096489 scopus 로고
    • Mitochondrial DNA of Chlamydomonas reinhardtii: The gene for apocytochrome b and the complete functional map of the 15.8 kb DNA
    • MICHAELIS, G., C. VAHRENHOLZ and E. PRATJE, 1990 Mitochondrial DNA of Chlamydomonas reinhardtii: the gene for apocytochrome b and the complete functional map of the 15.8 kb DNA. Mol. Gen. Genet. 223: 211-216.
    • (1990) Mol. Gen. Genet , vol.223 , pp. 211-216
    • MICHAELIS, G.1    VAHRENHOLZ, C.2    PRATJE, E.3
  • 41
    • 50549201557 scopus 로고
    • The relation of recombination to mutational advance
    • MULLER, H. J., 1964 The relation of recombination to mutational advance. Mutat. Res. 1: 2-9.
    • (1964) Mutat. Res , vol.1 , pp. 2-9
    • MULLER, H.J.1
  • 42
    • 0033955649 scopus 로고    scopus 로고
    • Examining rates and patterns of nucleotide substitution in plants
    • MUSE, S. V., 2000 Examining rates and patterns of nucleotide substitution in plants. Plant Mol. Biol. 42: 25-43.
    • (2000) Plant Mol. Biol , vol.42 , pp. 25-43
    • MUSE, S.V.1
  • 43
    • 0031875427 scopus 로고    scopus 로고
    • A degenerate group II intron in the intronless mitochondrial genome of Chlamydomonas reinhardtii: Evolutionary implications
    • NEDELCU, A. M., and R. W. LEE, 1998 A degenerate group II intron in the intronless mitochondrial genome of Chlamydomonas reinhardtii: evolutionary implications. Mol. Biol. Evol. 15: 918-922.
    • (1998) Mol. Biol. Evol , vol.15 , pp. 918-922
    • NEDELCU, A.M.1    LEE, R.W.2
  • 44
    • 0033917525 scopus 로고    scopus 로고
    • The complete mitochondrial DNA sequence of Scenedesmus obliquus reflects an intermediate stage in the evolution of the green algal mitochondrial genome
    • NEDELCU, A. M., R. W. LEE, C. LEMIEUX, M. W. GRAY and G. BURGER, 2000 The complete mitochondrial DNA sequence of Scenedesmus obliquus reflects an intermediate stage in the evolution of the green algal mitochondrial genome. Genome Res. 10: 819-831.
    • (2000) Genome Res , vol.10 , pp. 819-831
    • NEDELCU, A.M.1    LEE, R.W.2    LEMIEUX, C.3    GRAY, M.W.4    BURGER, G.5
  • 45
    • 27944477670 scopus 로고    scopus 로고
    • Concerted and birth-and-death evolution of multigene families
    • NEI, M., and A. P. ROONEY, 2005 Concerted and birth-and-death evolution of multigene families. Annu. Rev. Genet. 39: 121-152.
    • (2005) Annu. Rev. Genet , vol.39 , pp. 121-152
    • NEI, M.1    ROONEY, A.P.2
  • 46
    • 0034691074 scopus 로고    scopus 로고
    • Dynamic evolution of plant mitochondrial genomes: Mobile genes and introns and highly variable mutation rates
    • PALMER, J. D., K. L. ADAMS, Y. CHO, C. L. PARKINSON, Y. L. QIU et al., 2000 Dynamic evolution of plant mitochondrial genomes: mobile genes and introns and highly variable mutation rates. Proc. Natl. Acad. Sci. USA 97: 6960-6966.
    • (2000) Proc. Natl. Acad. Sci. USA , vol.97 , pp. 6960-6966
    • PALMER, J.D.1    ADAMS, K.L.2    CHO, Y.3    PARKINSON, C.L.4    QIU, Y.L.5
  • 47
    • 31544435757 scopus 로고    scopus 로고
    • Multiple major increases and decreases in mitochondrial substitution rates in the plant family Geraniaceae
    • PARKINSON, C. L., J. P. MOWER, Y. L. QIU, A. J. SHIRK, K. SONG et al., 2005 Multiple major increases and decreases in mitochondrial substitution rates in the plant family Geraniaceae. BMC Evol. Biol. 5: 73.
    • (2005) BMC Evol. Biol , vol.5 , pp. 73
    • PARKINSON, C.L.1    MOWER, J.P.2    QIU, Y.L.3    SHIRK, A.J.4    SONG, K.5
  • 48
    • 0033026606 scopus 로고    scopus 로고
    • Nucleotide substitution rate of mammalian mitochondrial genomes
    • PESOLE, G., C. GISSI, A. DE CHIRICO and C. SACCONE, 1999 Nucleotide substitution rate of mammalian mitochondrial genomes. J. Mol. Evol. 48: 427-434.
    • (1999) J. Mol. Evol , vol.48 , pp. 427-434
    • PESOLE, G.1    GISSI, C.2    DE CHIRICO, A.3    SACCONE, C.4
  • 49
    • 1942501620 scopus 로고    scopus 로고
    • The complete mitochondrial DNA sequence of the green alga Pseudendoclonium akinetum (Ulvophyceae) highlights distinctive evolutionary trends in the Chlorophyta and suggests a sister-group relationship between the Ulvophyceae and Chlorophyceae
    • POMBERT, J. F., C. OTIS, C. LEMIEUX and M. TURMEL, 2004 The complete mitochondrial DNA sequence of the green alga Pseudendoclonium akinetum (Ulvophyceae) highlights distinctive evolutionary trends in the Chlorophyta and suggests a sister-group relationship between the Ulvophyceae and Chlorophyceae. Mol. Biol. Evol. 21 (5): 922-935.
    • (2004) Mol. Biol. Evol , vol.21 , Issue.5 , pp. 922-935
    • POMBERT, J.F.1    OTIS, C.2    LEMIEUX, C.3    TURMEL, M.4
  • 50
    • 33745932662 scopus 로고    scopus 로고
    • The complete mitochondrial DNA sequence of the green alga Oltmannsiellopsis viridis: Evolutionary trends of the mitochondrial genome in the Ulvophyceae
    • POMBERT, J. F., P. BEAUCHAMP, C. OTIS, C. LEMIEUX and M. TURMEL, 2006 The complete mitochondrial DNA sequence of the green alga Oltmannsiellopsis viridis: evolutionary trends of the mitochondrial genome in the Ulvophyceae. Curr. Genet. 50: 137-147.
    • (2006) Curr. Genet , vol.50 , pp. 137-147
    • POMBERT, J.F.1    BEAUCHAMP, P.2    OTIS, C.3    LEMIEUX, C.4    TURMEL, M.5
  • 51
    • 33645242016 scopus 로고    scopus 로고
    • Evolutionary rates and expression level in Chlamydomonas
    • POPESCU, C. E., T. BORZA, J. P. BIELAWSKI and R. W. LEE, 2006 Evolutionary rates and expression level in Chlamydomonas. Genetics 172: 1567-1576.
    • (2006) Genetics , vol.172 , pp. 1567-1576
    • POPESCU, C.E.1    BORZA, T.2    BIELAWSKI, J.P.3    LEE, R.W.4
  • 52
    • 33645218188 scopus 로고    scopus 로고
    • High-efficiency biolistic transformation of Chlamydomonas mitochondria can be used to insert mutations in complex I genes
    • REMACLE, C., P. CARDOL, N. COOSEMANS, M. GAISNE and N. BONNEFOY, 2006 High-efficiency biolistic transformation of Chlamydomonas mitochondria can be used to insert mutations in complex I genes. Proc. Natl. Acad. Sci. USA 103: 4771-4776.
    • (2006) Proc. Natl. Acad. Sci. USA , vol.103 , pp. 4771-4776
    • REMACLE, C.1    CARDOL, P.2    COOSEMANS, N.3    GAISNE, M.4    BONNEFOY, N.5
  • 53
    • 8744310123 scopus 로고    scopus 로고
    • Codon usage bias from tRNA's point of view: Redundancy, specialization, and efficient decoding for translation optimization
    • ROCHA, E. P., 2004 Codon usage bias from tRNA's point of view: redundancy, specialization, and efficient decoding for translation optimization. Genome Res. 14: 2279-2286.
    • (2004) Genome Res , vol.14 , pp. 2279-2286
    • ROCHA, E.P.1
  • 54
    • 0035283304 scopus 로고    scopus 로고
    • Reducing the genome size of organelles favours gene transfer to the nucleus
    • SELOSSE, M., B. ALBERT and B. GODELLE, 2001 Reducing the genome size of organelles favours gene transfer to the nucleus. Trends Ecol. Evol. 16: 135-141.
    • (2001) Trends Ecol. Evol , vol.16 , pp. 135-141
    • SELOSSE, M.1    ALBERT, B.2    GODELLE, B.3
  • 55
    • 0031574072 scopus 로고    scopus 로고
    • The CLUSTAL_X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
    • THOMPSON, J. D., T. J. GIBSON, F. PLEWNIAK, F. JEANMOUGIN and D. G. HIGGINS, 1997 The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res. 25: 4876-4882.
    • (1997) Nucleic Acids Res , vol.25 , pp. 4876-4882
    • THOMPSON, J.D.1    GIBSON, T.J.2    PLEWNIAK, F.3    JEANMOUGIN, F.4    HIGGINS, D.G.5
  • 56
    • 0025325148 scopus 로고
    • Escape of DNA from mitochondria to the nucleus in Saccharomyces cerevisiae
    • THORSNESS, P. E., and T. D. FOX, 1990 Escape of DNA from mitochondria to the nucleus in Saccharomyces cerevisiae. Nature 346: 376-379.
    • (1990) Nature , vol.346 , pp. 376-379
    • THORSNESS, P.E.1    FOX, T.D.2
  • 57
    • 0027174162 scopus 로고
    • Nuclear mutations in Saccharomyces cerevisiae that affect the escape of DNA from mitochondria to the nucleus
    • THORSNESS, P. E., and T. D. FOX, 1993 Nuclear mutations in Saccharomyces cerevisiae that affect the escape of DNA from mitochondria to the nucleus. Genetics 134: 21-28.
    • (1993) Genetics , vol.134 , pp. 21-28
    • THORSNESS, P.E.1    FOX, T.D.2
  • 58
    • 0027359351 scopus 로고
    • Mitochondrial DNA of Chlamydomonas reinhardtii: The structure of the ends of the linear 15.8-kb genome suggests mechanisms for DNA replication
    • VAHRENHOLZ, C., G. RIEMEN, E. PRATJE, B. DUJON and G. MICHAELIS, 1993 Mitochondrial DNA of Chlamydomonas reinhardtii: the structure of the ends of the linear 15.8-kb genome suggests mechanisms for DNA replication. Curr. Genet. 24: 241-247.
    • (1993) Curr. Genet , vol.24 , pp. 241-247
    • VAHRENHOLZ, C.1    RIEMEN, G.2    PRATJE, E.3    DUJON, B.4    MICHAELIS, G.5
  • 60
    • 0023462635 scopus 로고
    • Rates of nucleotide substitution vary greatly among plant mitochondrial, chloroplast, and nuclear DNAs
    • WOLFE, K. H., W. H. LI and P. M. SHARP, 1987 Rates of nucleotide substitution vary greatly among plant mitochondrial, chloroplast, and nuclear DNAs. Proc. Natl. Acad. Sci. USA 84: 9054-9058.
    • (1987) Proc. Natl. Acad. Sci. USA , vol.84 , pp. 9054-9058
    • WOLFE, K.H.1    LI, W.H.2    SHARP, P.M.3
  • 61
    • 0025318864 scopus 로고
    • The 'effective number of codons' used in a gene
    • WRIGHT, F., 1990 The 'effective number of codons' used in a gene. Gene 87: 23-29.
    • (1990) Gene , vol.87 , pp. 23-29
    • WRIGHT, F.1
  • 62
    • 13444249920 scopus 로고    scopus 로고
    • Mutation and selection on the anticodon of tRNA genes in vertebrate mitochondrial genomes
    • XIA, X., 2005 Mutation and selection on the anticodon of tRNA genes in vertebrate mitochondrial genomes. Gene 345: 13-20.
    • (2005) Gene , vol.345 , pp. 13-20
    • XIA, X.1
  • 63
    • 0034848170 scopus 로고    scopus 로고
    • DAMBE: Software package for data analysis in molecular biology and evolution
    • XIA, X., and Z. XIE, 2001 DAMBE: software package for data analysis in molecular biology and evolution. J. Hered. 92: 371-373.
    • (2001) J. Hered , vol.92 , pp. 371-373
    • XIA, X.1    XIE, Z.2
  • 64
    • 23744466496 scopus 로고    scopus 로고
    • Shared molecular characteristics of successfully transformed mitochondrial genomes in Chlamydomonas reinhardtii
    • YAMASAKI, T., S. KUROKAWA, K. I. WATANABE, K. IKUTA and T. OHAMA, 2005 Shared molecular characteristics of successfully transformed mitochondrial genomes in Chlamydomonas reinhardtii. Plant Mol. Biol. 58: 515-527.
    • (2005) Plant Mol. Biol , vol.58 , pp. 515-527
    • YAMASAKI, T.1    KUROKAWA, S.2    WATANABE, K.I.3    IKUTA, K.4    OHAMA, T.5
  • 65
    • 0030683599 scopus 로고    scopus 로고
    • PAML: A program package for phylogenetic analysis by maximum likelihood
    • YANG, Z., 1997 PAML: a program package for phylogenetic analysis by maximum likelihood. Comput. Appl. Biosci. 13: 555-556.
    • (1997) Comput. Appl. Biosci , vol.13 , pp. 555-556
    • YANG, Z.1


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