메뉴 건너뛰기




Volumn 581, Issue 8, 2007, Pages 1644-1648

DNA-probes for the highly sensitive identification of single nucleotide polymorphism using single-molecule spectroscopy

Author keywords

DNA hairpin probes; Fluorescence spectroscopy; Single nucleotide polymorphism; Single molecule spectroscopy

Indexed keywords

DNA; GUANOSINE; OLIGONUCLEOTIDE;

EID: 34047120719     PISSN: 00145793     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.febslet.2007.03.031     Document Type: Article
Times cited : (19)

References (21)
  • 2
  • 3
    • 0348109503 scopus 로고    scopus 로고
    • Development and validation of a quantitative real-time PCR assay using fluorescence resonance energy transfer technology for detection of Aspergillus fumigatus in experimental invasive pulmonary aspergillosis
    • O'Sullivan C.E., Kasai M., Francesconi A., Petraitis V., Petraitiene R., Kelaher A.M., Sarafandi A.A., and Walsh T.J. Development and validation of a quantitative real-time PCR assay using fluorescence resonance energy transfer technology for detection of Aspergillus fumigatus in experimental invasive pulmonary aspergillosis. J. Clin. Microbiol. 41 12 (2003) 5676-5682
    • (2003) J. Clin. Microbiol. , vol.41 , Issue.12 , pp. 5676-5682
    • O'Sullivan, C.E.1    Kasai, M.2    Francesconi, A.3    Petraitis, V.4    Petraitiene, R.5    Kelaher, A.M.6    Sarafandi, A.A.7    Walsh, T.J.8
  • 4
    • 2442589349 scopus 로고    scopus 로고
    • Multiplex real-time quantitative RT-PCR assay for hepatitis B virus, hepatitis C virus, and human immunodeficiency virus type 1
    • Candotti D., Temple J., Owusu-Ofori S., and Allain J.P. Multiplex real-time quantitative RT-PCR assay for hepatitis B virus, hepatitis C virus, and human immunodeficiency virus type 1. J. Virol. Methods 118 1 (2004) 39-47
    • (2004) J. Virol. Methods , vol.118 , Issue.1 , pp. 39-47
    • Candotti, D.1    Temple, J.2    Owusu-Ofori, S.3    Allain, J.P.4
  • 5
    • 2942676469 scopus 로고    scopus 로고
    • Sequencing-based detection of low-frequency human immunodeficiency virus type 1 drug-resistant mutants by an RNA/DNA heteroduplex generator-tracking assay
    • Kapoor A., Jones M., Shafer R.W., Rhee S.Y., Kazanjian P., and Delwart E.L. Sequencing-based detection of low-frequency human immunodeficiency virus type 1 drug-resistant mutants by an RNA/DNA heteroduplex generator-tracking assay. J. Virol. 78 13 (2004) 7112-7123
    • (2004) J. Virol. , vol.78 , Issue.13 , pp. 7112-7123
    • Kapoor, A.1    Jones, M.2    Shafer, R.W.3    Rhee, S.Y.4    Kazanjian, P.5    Delwart, E.L.6
  • 6
    • 5444257178 scopus 로고    scopus 로고
    • Direct detection of rifampin- and isoniazid-resistant Mycobacterium tuberculosis in auramine-rhodamine-positive sputum specimens by real-time PCR
    • Ruiz M., Torres M.J., Llanos A.C., Arroyo A., Palomares J.C., and Aznar J. Direct detection of rifampin- and isoniazid-resistant Mycobacterium tuberculosis in auramine-rhodamine-positive sputum specimens by real-time PCR. J. Clin. Microbiol. 42 4 (2004) 1585-1589
    • (2004) J. Clin. Microbiol. , vol.42 , Issue.4 , pp. 1585-1589
    • Ruiz, M.1    Torres, M.J.2    Llanos, A.C.3    Arroyo, A.4    Palomares, J.C.5    Aznar, J.6
  • 7
    • 0036192549 scopus 로고    scopus 로고
    • New real-time PCR able to detect in a single tube multiple rifampin resistance mutations and high-level isoniazid resistance mutations in Mycobacterium tuberculosis
    • García de Viedma D., de Sol Díaz Infantes M., Lasala F., Chaves F., Alcalá L., and Bouza E. New real-time PCR able to detect in a single tube multiple rifampin resistance mutations and high-level isoniazid resistance mutations in Mycobacterium tuberculosis. J. Clin. Microbiol. 40 3 (2002) 988-995
    • (2002) J. Clin. Microbiol. , vol.40 , Issue.3 , pp. 988-995
    • García de Viedma, D.1    de Sol Díaz Infantes, M.2    Lasala, F.3    Chaves, F.4    Alcalá, L.5    Bouza, E.6
  • 8
    • 0030754954 scopus 로고    scopus 로고
    • Template-directed dye-terminator incorporation (TDI) assay: a homogeneous DNA diagnostic method based on fluorescence resonance energy transfer
    • Chen X., and Kwork P.Y. Template-directed dye-terminator incorporation (TDI) assay: a homogeneous DNA diagnostic method based on fluorescence resonance energy transfer. Nucleic Acid Res. 25 (1997) 337-353
    • (1997) Nucleic Acid Res. , vol.25 , pp. 337-353
    • Chen, X.1    Kwork, P.Y.2
  • 9
    • 0025861818 scopus 로고
    • Detection of specific polymerase chain reaction product by utilizing the 5′ → 3′ exonuclease activity of Thermus aquaticus DNA polymerase
    • Holland P.M., Abramson D.R., Watson R., and Gelfand H.D. Detection of specific polymerase chain reaction product by utilizing the 5′ → 3′ exonuclease activity of Thermus aquaticus DNA polymerase. Proc. Natl. Acad. Sci. USA 88 (1991) 7276-7280
    • (1991) Proc. Natl. Acad. Sci. USA , vol.88 , pp. 7276-7280
    • Holland, P.M.1    Abramson, D.R.2    Watson, R.3    Gelfand, H.D.4
  • 10
    • 0029670262 scopus 로고    scopus 로고
    • Molecular beacons: probes that fluoresce upon hybridization
    • Tyagi S., and Kramer F.R. Molecular beacons: probes that fluoresce upon hybridization. Nat. Biotechnol. 14 (1997) 303-308
    • (1997) Nat. Biotechnol. , vol.14 , pp. 303-308
    • Tyagi, S.1    Kramer, F.R.2
  • 11
    • 0035075442 scopus 로고    scopus 로고
    • Single-mismatch detection using gold-quenched fluorescent oligonucleotides
    • Dubertret B., Calame M., and Libchaber A.J. Single-mismatch detection using gold-quenched fluorescent oligonucleotides. Nat. Biotechnol. 19 (2001) 365-370
    • (2001) Nat. Biotechnol. , vol.19 , pp. 365-370
    • Dubertret, B.1    Calame, M.2    Libchaber, A.J.3
  • 12
  • 13
    • 0034663372 scopus 로고    scopus 로고
    • Probes for detection of specific DNA sequences at the single-molecule level
    • Knemeyer J.P., Marmé N., and Sauer M. Probes for detection of specific DNA sequences at the single-molecule level. Anal. Chem. 72 (2000) 3717-3724
    • (2000) Anal. Chem. , vol.72 , pp. 3717-3724
    • Knemeyer, J.P.1    Marmé, N.2    Sauer, M.3
  • 14
    • 0043234727 scopus 로고    scopus 로고
    • Nucleobase-specific quenching of fluorescent dyes in DNA-hairpins
    • Heinlein T., Knemeyer J.P., Piestert O., and Sauer M. Nucleobase-specific quenching of fluorescent dyes in DNA-hairpins. J. Phys. Chem. B. 107 31 (2003) 7957-7964
    • (2003) J. Phys. Chem. B. , vol.107 , Issue.31 , pp. 7957-7964
    • Heinlein, T.1    Knemeyer, J.P.2    Piestert, O.3    Sauer, M.4
  • 16
    • 0345129990 scopus 로고    scopus 로고
    • Multiplex detection of single-nucleotide variations using molecular beacons
    • Marras S.A.E., Kramer F.R., and Tyagi S. Multiplex detection of single-nucleotide variations using molecular beacons. Genet. Anal. 14 (1999) 151-156
    • (1999) Genet. Anal. , vol.14 , pp. 151-156
    • Marras, S.A.E.1    Kramer, F.R.2    Tyagi, S.3
  • 18
    • 0033562150 scopus 로고    scopus 로고
    • Detection and identification of single dye labeled mononucleotide molecules released from an optical fiber in a microcapillary: first steps towards a new single molecule DNA sequencing technique
    • Sauer M., Angerer B., Han K.T., and Zander C. Detection and identification of single dye labeled mononucleotide molecules released from an optical fiber in a microcapillary: first steps towards a new single molecule DNA sequencing technique. Phys. Chem. Chem. Phys. 1 (1999) 2471-2477
    • (1999) Phys. Chem. Chem. Phys. , vol.1 , pp. 2471-2477
    • Sauer, M.1    Angerer, B.2    Han, K.T.3    Zander, C.4
  • 19
    • 33746484594 scopus 로고    scopus 로고
    • Identification of single-point mutations in mycobacterial 16S rRNA sequences by confocal single-molecule fluorescence spectroscopy
    • Marmé N., Friedrich A., Müller M., Nolte O., Wolfrum J., Hoheisel J.D., Sauer M., and Knemeyer J.P. Identification of single-point mutations in mycobacterial 16S rRNA sequences by confocal single-molecule fluorescence spectroscopy. Nucleic Acid Res. 34 (2006) e90
    • (2006) Nucleic Acid Res. , vol.34
    • Marmé, N.1    Friedrich, A.2    Müller, M.3    Nolte, O.4    Wolfrum, J.5    Hoheisel, J.D.6    Sauer, M.7    Knemeyer, J.P.8
  • 20
    • 0026621730 scopus 로고
    • Very stable mismatch duplexes: structural and thermodynamics studies on tandem G-A mismatches in DNA
    • Ebel S., Lane A.N., and Brown T. Very stable mismatch duplexes: structural and thermodynamics studies on tandem G-A mismatches in DNA. Biochemistry 31 (1992) 12083-12086
    • (1992) Biochemistry , vol.31 , pp. 12083-12086
    • Ebel, S.1    Lane, A.N.2    Brown, T.3
  • 21
    • 0020524098 scopus 로고
    • Detection of a guanine-adenine base pair in a decadeoxyribonucleotide by proton magnetic resonance spectroscopy
    • Kan L.S., Chandrasegaran S., Pulford S.M., and Miller P.S. Detection of a guanine-adenine base pair in a decadeoxyribonucleotide by proton magnetic resonance spectroscopy. Proc. Natl. Acad. Sci. USA 80 (1983) 4263-4265
    • (1983) Proc. Natl. Acad. Sci. USA , vol.80 , pp. 4263-4265
    • Kan, L.S.1    Chandrasegaran, S.2    Pulford, S.M.3    Miller, P.S.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.