-
1
-
-
11944267365
-
Antisense oligonucleotides: A new therapeutic principle
-
Uhlmann, E., and Peyman, A. (1990) Antisense oligonucleotides: a new therapeutic principle. Chem. Rev. 90, 543-584.
-
(1990)
Chem. Rev
, vol.90
, pp. 543-584
-
-
Uhlmann, E.1
Peyman, A.2
-
2
-
-
0024041180
-
Role of RNase H in hybrid-arrested translation by antisense oligonucleotides
-
Walder, R. Y., and Walder, J. (1988) Role of RNase H in hybrid-arrested translation by antisense oligonucleotides. Proc. Nad. Acad. Sci. U.S.A. 55,5011-5015.
-
(1988)
Proc. Nad. Acad. Sci. U.S.A
, vol.55
, pp. 5011-5015
-
-
Walder, R.Y.1
Walder, J.2
-
3
-
-
0034603771
-
Structural basis of cleavage by RNase H of hybrids of arabinonucleic acids and RNA
-
Minasov, G., Teplova, M., Nielsen, P., Wengel, J., and EgIi, M. (2000) Structural basis of cleavage by RNase H of hybrids of arabinonucleic acids and RNA. Biochemistry 39, 3525-3532.
-
(2000)
Biochemistry
, vol.39
, pp. 3525-3532
-
-
Minasov, G.1
Teplova, M.2
Nielsen, P.3
Wengel, J.4
EgIi, M.5
-
4
-
-
0035962892
-
A critical survey of the structure-function of the antisense oligo/ RNA heteroduplex as substrate for RNase H
-
Zamaratski, E., Pradeepkumar, P. I., and Chattopadhyaya, J. (2001) A critical survey of the structure-function of the antisense oligo/ RNA heteroduplex as substrate for RNase H. J. Biochem. Biophys. Methods 48, 189-208.
-
(2001)
J. Biochem. Biophys. Methods
, vol.48
, pp. 189-208
-
-
Zamaratski, E.1
Pradeepkumar, P.I.2
Chattopadhyaya, J.3
-
5
-
-
0032503562
-
A novel class of oligonucleotide analogs containing 2'-O,3'-C-linked [3.2.0]bicycloarabinonucleoside mono-mers: Synthesis, thermal affinity studies, and molecular modeling
-
Christensen, N. K., Peterssen, M., Nielsen, P., Jacobsen, J. P., Olsen, C. E., and Wengel, J. (1998) A novel class of oligonucleotide analogs containing 2'-O,3'-C-linked [3.2.0]bicycloarabinonucleoside mono-mers: synthesis, thermal affinity studies, and molecular modeling. J. Am. Chem. Soc. 120, 5458-5463.
-
(1998)
J. Am. Chem. Soc
, vol.120
, pp. 5458-5463
-
-
Christensen, N.K.1
Peterssen, M.2
Nielsen, P.3
Jacobsen, J.P.4
Olsen, C.E.5
Wengel, J.6
-
6
-
-
0037460131
-
Efficient RNase H-directed cleavage of RNA promoted by antisense DNA or 2'F-ANA constructs containing acyclic nucleotide inserts
-
Mangos, M. M., Min, K.-L., Viazovkina, E., Galarneau, A., Elzagheid, M. I., Parniak, M. A., and Damha, M. J. (2003) Efficient RNase H-directed cleavage of RNA promoted by antisense DNA or 2'F-ANA constructs containing acyclic nucleotide inserts. J. Am. Chem. Soc. 125, 654-661.
-
(2003)
J. Am. Chem. Soc
, vol.125
, pp. 654-661
-
-
Mangos, M.M.1
Min, K.-L.2
Viazovkina, E.3
Galarneau, A.4
Elzagheid, M.I.5
Parniak, M.A.6
Damha, M.J.7
-
7
-
-
0026341239
-
Sequence-selective recognition of DNA by strand displacement with a thymine-substituted polyamide
-
Nielsen, P. E., Egholm, M., Berg, R. H., and Buchardt, O. (1991) Sequence-selective recognition of DNA by strand displacement with a thymine-substituted polyamide. Science, 254, 1497-1500.
-
(1991)
Science
, vol.254
, pp. 1497-1500
-
-
Nielsen, P.E.1
Egholm, M.2
Berg, R.H.3
Buchardt, O.4
-
8
-
-
0001666442
-
Some pyrimidine deriva-tives
-
Rabinowtiz, J. L., and Gurin, S. (1953) Some pyrimidine deriva-tives. J. Am. Chem. Soc. 75, 5758-5759.
-
(1953)
J. Am. Chem. Soc
, vol.75
, pp. 5758-5759
-
-
Rabinowtiz, J.L.1
Gurin, S.2
-
9
-
-
0021349884
-
Synthesis of analogs and oligomers of N-(2-aminoethyl)glycine and their gas-trointestinal absorption in the rate
-
Heimer, E. P., Gallo-Torres, H. E., Felix, A. M., Ahmad, M., Lambros, T. J., Scheidl, F., and Meienhofer, J. (1984) Synthesis of analogs and oligomers of N-(2-aminoethyl)glycine and their gas-trointestinal absorption in the rate. Int. J. Pept. Res. 23, 203-211.
-
(1984)
Int. J. Pept. Res
, vol.23
, pp. 203-211
-
-
Heimer, E.P.1
Gallo-Torres, H.E.2
Felix, A.M.3
Ahmad, M.4
Lambros, T.J.5
Scheidl, F.6
Meienhofer, J.7
-
10
-
-
0028866843
-
The synthesis of polyamide nucleic acids using a novel monomethoxytrityl protecting-group strategy
-
Will, D. W., Breipohl, G., Langner, D., Knolle, J., and Uhlmann, E. (1995) The synthesis of polyamide nucleic acids using a novel monomethoxytrityl protecting-group strategy. Tetrahedron 51, 12069-12082.
-
(1995)
Tetrahedron
, vol.51
, pp. 12069-12082
-
-
Will, D.W.1
Breipohl, G.2
Langner, D.3
Knolle, J.4
Uhlmann, E.5
-
11
-
-
0030002597
-
New approach to the solid phase synthesis of polyamide nucleic acid analogues (PNA) and PNA-DNA conjugates
-
Stetsenko, D. A., Lubyako, E. N., Potapov, V. K., Azhikina, T. L., and Sverdlov, E. D. (1996) New approach to the solid phase synthesis of polyamide nucleic acid analogues (PNA) and PNA-DNA conjugates. Tetrahedron Lett. 37, 3571-3576.
-
(1996)
Tetrahedron Lett
, vol.37
, pp. 3571-3576
-
-
Stetsenko, D.A.1
Lubyako, E.N.2
Potapov, V.K.3
Azhikina, T.L.4
Sverdlov, E.D.5
-
12
-
-
0029837776
-
Synthesis and properties of DNA-PNA chimeric oligomers
-
Finn, P. J., Gibson, N. J., Fallon, R., Hamilton, A., and Brown, T. (1996) Synthesis and properties of DNA-PNA chimeric oligomers. Nucleic Acids Res. 24, 3357-3363.
-
(1996)
Nucleic Acids Res
, vol.24
, pp. 3357-3363
-
-
Finn, P.J.1
Gibson, N.J.2
Fallon, R.3
Hamilton, A.4
Brown, T.5
-
13
-
-
32644451295
-
Synthesis of 2'-fluoroarabino nucleoside phosphora-midites and their use in the synthesis of 2'F-ANA
-
Chapter 4.15, W. J. Sons, New York
-
Viazovkina, E. V., Mangos, M. M., Elzagheid, M. I., and Damha, M. J. (2002). Synthesis of 2'-fluoroarabino nucleoside phosphora-midites and their use in the synthesis of 2'F-ANA. In Current Protocols in Nucleic Acid Chemistry, Chapter 4.15, W. J. Sons, New York.
-
(2002)
Current Protocols in Nucleic Acid Chemistry
-
-
Viazovkina, E.V.1
Mangos, M.M.2
Elzagheid, M.I.3
Damha, M.J.4
-
14
-
-
37049092683
-
One-step synthesis of 5'-azido nucleosides
-
Yamamoto, I., Sekine, M., and Hata, T. (1980) One-step synthesis of 5'-azido nucleosides. J. Chem. Soc., Perkin Trans, l l, 306-310.
-
(1980)
J. Chem. Soc., Perkin Trans
, vol.50
, Issue.L
, pp. 306-310
-
-
Yamamoto, I.1
Sekine, M.2
Hata, T.3
-
15
-
-
0024380077
-
Synthesis and selective cleavage of oligodeoxyribonucleotides containing non-chiral inter-nucleotide phosphoramidate linkages
-
Mag, M., and Engels, J. W. (1989) Synthesis and selective cleavage of oligodeoxyribonucleotides containing non-chiral inter-nucleotide phosphoramidate linkages. Nucleic Acids Res. 17, 5973 - 1588.
-
(1989)
Nucleic Acids Res
, vol.17
, pp. 5973-1588
-
-
Mag, M.1
Engels, J.W.2
-
16
-
-
0036713090
-
Synthesis and polymerase incorporation of 5'-amino-2',5'-dideoxy-5'-N- triphosphate nucleotides
-
Wolfe, J. L., Kawate, T., Belenky, A., and Stanton, V., Jr. (2002) Synthesis and polymerase incorporation of 5'-amino-2',5'-dideoxy-5'-N- triphosphate nucleotides. Nucleic Acids Res. 30 (17), 3739-3747.
-
(2002)
Nucleic Acids Res
, vol.30
, Issue.17
, pp. 3739-3747
-
-
Wolfe, J.L.1
Kawate, T.2
Belenky, A.3
Stanton Jr., V.4
-
17
-
-
0032539186
-
Hybrids of RNA and arabinonucleic acids (ANA and 2'F-ANA) are substrates of ribo-nuclease H
-
Damha, M. J., Wilds, C. J., Noronha, A., Brukner, I., Borkow, G., Arion, D., and Parniak, M. A. (1998) Hybrids of RNA and arabinonucleic acids (ANA and 2'F-ANA) are substrates of ribo-nuclease H. J. Am. Chem. Soc. 120, 12976-12977.
-
(1998)
J. Am. Chem. Soc
, vol.120
, pp. 12976-12977
-
-
Damha, M.J.1
Wilds, C.J.2
Noronha, A.3
Brukner, I.4
Borkow, G.5
Arion, D.6
Parniak, M.A.7
-
18
-
-
0034666192
-
2'-Deoxy-2'-fluoro-β-D- arabinonucleosides and oligonucleotides (2'F-ANA): Synthesis and physicochemical studies
-
Wilds, C. J., and Damha, M. J. (2000) 2'-Deoxy-2'-fluoro-β-D- arabinonucleosides and oligonucleotides (2'F-ANA): synthesis and physicochemical studies. Nucleic Acids Res. 28, 3625-3635.
-
(2000)
Nucleic Acids Res
, vol.28
, pp. 3625-3635
-
-
Wilds, C.J.1
Damha, M.J.2
-
19
-
-
0031592576
-
A convenient automated solid-phase synthesis of PNA-(5')-DNA-(3')-PNA chimera
-
van der Laan, A. C., Brill, R., Kuimelis, R. G., Kuyl-Yeheskiely, E., van Boom, J. H., Andrus, A., and Vinayak, R. (1997) A convenient automated solid-phase synthesis of PNA-(5')-DNA-(3')-PNA chimera. Tetrahedron Lett. 38, 2249-2252.
-
(1997)
Tetrahedron Lett
, vol.38
, pp. 2249-2252
-
-
van der Laan, A.C.1
Brill, R.2
Kuimelis, R.G.3
Kuyl-Yeheskiely, E.4
van Boom, J.H.5
Andrus, A.6
Vinayak, R.7
-
20
-
-
85047670181
-
Solid phase synthesis of directly linked PNA-DNA hybrids
-
Bergmann, F., Bannwarth, W., and Tarn, S. (1995) Solid phase synthesis of directly linked PNA-DNA hybrids. Tetrahedron Lett. 36, 6823-6826.
-
(1995)
Tetrahedron Lett
, vol.36
, pp. 6823-6826
-
-
Bergmann, F.1
Bannwarth, W.2
Tarn, S.3
-
21
-
-
0030833028
-
Synthesis and hybridization properties of modified oligonucleotides with PNA-DNA dimmer blocks
-
Wenninger, D., and Seliger, H. (1997) Synthesis and hybridization properties of modified oligonucleotides with PNA-DNA dimmer blocks. Nucleosides Nucleotides 16, 977-980.
-
(1997)
Nucleosides Nucleotides
, vol.16
, pp. 977-980
-
-
Wenninger, D.1
Seliger, H.2
-
22
-
-
0032476790
-
PNA: Synthetic polyamide nucleic acids with unusual binding properties
-
Ed. 37
-
Uhlmann, E., Peyman, A., Breipohl, G., and Will, D. W. (1998) PNA: Synthetic polyamide nucleic acids with unusual binding properties. Angew. Chem., Int. Ed. 37, 2796-2823.
-
(1998)
Angew. Chem., Int
, pp. 2796-2823
-
-
Uhlmann, E.1
Peyman, A.2
Breipohl, G.3
Will, D.W.4
-
23
-
-
0032539878
-
Optimiza-tion of the binding properties of PNA-(5')-DNA chimerae
-
van der Laan, A. C., Havenaar, P., Costing, R. S., Kuyl-Yeheskiely, E., Uhlmann, E., and van Boom, J. H. (1998) Optimiza-tion of the binding properties of PNA-(5')-DNA chimerae. Bioorg. Med. Chem. Lett. 8, 663-668.
-
(1998)
Bioorg. Med. Chem. Lett
, vol.8
, pp. 663-668
-
-
van der Laan, A.C.1
Havenaar, P.2
Costing, R.S.3
Kuyl-Yeheskiely, E.4
Uhlmann, E.5
van Boom, J.H.6
-
24
-
-
0032524080
-
Crystal structures of B-DNA with incorporated 2'-deoxy-2'-fluoro-arabino- furanosyl thymines: Implications of conformational preorganization for duplex stability
-
Berger, I., Tereshko, V., Ikeda, H., Marquez, V. E., and EgIi, M. (1998) Crystal structures of B-DNA with incorporated 2'-deoxy-2'-fluoro-arabino- furanosyl thymines: implications of conformational preorganization for duplex stability. Nucleic Acids Res. 26, 2473-2480.
-
(1998)
Nucleic Acids Res
, vol.26
, pp. 2473-2480
-
-
Berger, I.1
Tereshko, V.2
Ikeda, H.3
Marquez, V.E.4
EgIi, M.5
-
25
-
-
0035504940
-
Solution structure of an arabinonucleic acid (ANA)/RNA duplex in a chimeric hairpin: Comparison with 2'-fluoro-ANA/RNA and DNA/RNA hybrids
-
Denisov, A. Y., Noronha, A. M., Wilds, C. J., Trempe, J. F., Pon, R. T., Gehring, K., and Damha, M. J. (2001) Solution structure of an arabinonucleic acid (ANA)/RNA duplex in a chimeric hairpin: comparison with 2'-fluoro-ANA/RNA and DNA/RNA hybrids. Nucleic Acids Res. 29, 4284-4293.
-
(2001)
Nucleic Acids Res
, vol.29
, pp. 4284-4293
-
-
Denisov, A.Y.1
Noronha, A.M.2
Wilds, C.J.3
Trempe, J.F.4
Pon, R.T.5
Gehring, K.6
Damha, M.J.7
-
26
-
-
0026027075
-
Transforming function of proto-ras genes depends on heterologous promoters and is enhanced by specific point mutations
-
Chakraborty, A. K., Cichutek, K., and Duesberg, P. H. (1991) Transforming function of proto-ras genes depends on heterologous promoters and is enhanced by specific point mutations. Proc. Natl. Acad. Sci. U.S.A. 88, 2217-2221.
-
(1991)
Proc. Natl. Acad. Sci. U.S.A
, vol.88
, pp. 2217-2221
-
-
Chakraborty, A.K.1
Cichutek, K.2
Duesberg, P.H.3
-
27
-
-
0029022018
-
Mutations of Ras genes in human tumors
-
Kiaris, H., and Spandidos, D. A. (1995) Mutations of Ras genes in human tumors. Int. J. Oncol. 7, 413-421.
-
(1995)
Int. J. Oncol
, vol.7
, pp. 413-421
-
-
Kiaris, H.1
Spandidos, D.A.2
-
28
-
-
0029034208
-
Analysis of H-Ras, K-Ras and N-Ras genes for expression, mutation and amplification in laryngeal tumors
-
Kiaris, H., and Spandidos, D. A. (1995) Analysis of H-Ras, K-Ras and N-Ras genes for expression, mutation and amplification in laryngeal tumors. Int. J. Oncol. 7, 75-80.
-
(1995)
Int. J. Oncol
, vol.7
, pp. 75-80
-
-
Kiaris, H.1
Spandidos, D.A.2
-
29
-
-
0030954858
-
Dominant transformation by mutated human ras genes in vitro requires more than 100 times higher expression than is observed in cancers
-
Hua, V. Y., Wang, W. K., and Duesberg, P. H. (1997) Dominant transformation by mutated human ras genes in vitro requires more than 100 times higher expression than is observed in cancers. Proc. Natl. Acad. Sci. U.S.A. 94, 9614-9619.
-
(1997)
Proc. Natl. Acad. Sci. U.S.A
, vol.94
, pp. 9614-9619
-
-
Hua, V.Y.1
Wang, W.K.2
Duesberg, P.H.3
-
30
-
-
33947635987
-
-
Zuker, M, Mathews, D. H, and Turner, D. H, Eds, Kluwer Academic Publishers, Norwell, MA
-
Zuker, M., Mathews, D. H., and Turner, D. H., Eds. (1999) Biochemistry and Biotechnology, Kluwer Academic Publishers, Norwell, MA.
-
(1999)
Biochemistry and Biotechnology
-
-
-
31
-
-
0033591465
-
Expanded sequence dependence of thermodynamic parameters improves prediction of RNA secondary structure
-
Mathews, D. H., Sabina, J., Zuker, M., and Turner, D. H. (1999) Expanded sequence dependence of thermodynamic parameters improves prediction of RNA secondary structure. J. Mol. Biol. 288, 911-940.
-
(1999)
J. Mol. Biol
, vol.288
, pp. 911-940
-
-
Mathews, D.H.1
Sabina, J.2
Zuker, M.3
Turner, D.H.4
-
32
-
-
0035033346
-
Nuclease resistance and RNase H sensitivity of oligonucleotides bridged by oligomethylenediol and oligoethylene glycol linkers
-
Vorobjev, P. E., Pyshnaya, I. A., Pyshnyi, D. V., Venyaminova, A. G., Ivanova, E. M., Zarytova, V. F., Bonora, G. M., Scalfi-Happ, C., and Seliger, H. (2001) Nuclease resistance and RNase H sensitivity of oligonucleotides bridged by oligomethylenediol and oligoethylene glycol linkers. Antisense Nucleic Acid Drug Dev. 11, 77-85.
-
(2001)
Antisense Nucleic Acid Drug Dev
, vol.11
, pp. 77-85
-
-
Vorobjev, P.E.1
Pyshnaya, I.A.2
Pyshnyi, D.V.3
Venyaminova, A.G.4
Ivanova, E.M.5
Zarytova, V.F.6
Bonora, G.M.7
Scalfi-Happ, C.8
Seliger, H.9
-
33
-
-
0034331352
-
Cleavage of RNA in hybrid duplexes by the E. coli ribonuclease H: II. Substrate properties of oligonucleotides containing nonnucleotide linkers
-
Vorobjev, P. E., Pyshnaya, I. A., Pyshnyi, D. V., Repkova, M. N., Venyaminova, A. G., Zenkova, M. A., Ivanova, E. M., Scalfi-Happ, C., Seliger, H., Bonora, G. M., and Zarytova, V. F. (2000) Cleavage of RNA in hybrid duplexes by the E. coli ribonuclease H: II. Substrate properties of oligonucleotides containing nonnucleotide linkers. Bioorg. Khim. 26, 758-764.
-
(2000)
Bioorg. Khim
, vol.26
, pp. 758-764
-
-
Vorobjev, P.E.1
Pyshnaya, I.A.2
Pyshnyi, D.V.3
Repkova, M.N.4
Venyaminova, A.G.5
Zenkova, M.A.6
Ivanova, E.M.7
Scalfi-Happ, C.8
Seliger, H.9
Bonora, G.M.10
Zarytova, V.F.11
-
34
-
-
1842835804
-
Flexible and frozen sugar-modified nucleic acids - modulation of biological activity through furanose ring dynamics in the antisense strand
-
Mangos, M. M., and Damha, M. J. (2002) Flexible and frozen sugar-modified nucleic acids - modulation of biological activity through furanose ring dynamics in the antisense strand. Curr. Top. Med. Chem. (Sharjah, United Arab Emirates) 2, 1145-1169.
-
(2002)
Curr. Top. Med. Chem. (Sharjah, United Arab Emirates)
, vol.2
, pp. 1145-1169
-
-
Mangos, M.M.1
Damha, M.J.2
-
35
-
-
0037066105
-
Potent gene-specific inhibitory properties of mixed-backbone antisense oligonucleotides comprised of 2'-deoxy-2'-fluoro-D- arabinose and 2'-deoxy nucle-otides
-
Lok, C-N., Viazovkina, E., Min, K.-L., Nagy, E., Wilds, C. J., Damha, M. J., and Parniak, M. A. (2002) Potent gene-specific inhibitory properties of mixed-backbone antisense oligonucleotides comprised of 2'-deoxy-2'-fluoro-D- arabinose and 2'-deoxy nucle-otides. Biochemistry 41, 3457-3467.
-
(2002)
Biochemistry
, vol.41
, pp. 3457-3467
-
-
Lok, C.-N.1
Viazovkina, E.2
Min, K.-L.3
Nagy, E.4
Wilds, C.J.5
Damha, M.J.6
Parniak, M.A.7
-
36
-
-
0034846027
-
Properties of arabinonucleic acids (ANA & 2'F-ANA): Implications for the design of antisense therapeutics that invoke RNase H cleavage of RNA
-
Damha, M. J., Noronha, A. M., Wilds, C. J., Trempe, J.-F., Denisov, A., and Gehring, K. (2001) Properties of arabinonucleic acids (ANA & 2'F-ANA): Implications for the design of antisense therapeutics that invoke RNase H cleavage of RNA. Nucleosides, Nucleotides Nucleic Acids 20, 429-440.
-
(2001)
Nucleosides, Nucleotides Nucleic Acids
, vol.20
, pp. 429-440
-
-
Damha, M.J.1
Noronha, A.M.2
Wilds, C.J.3
Trempe, J.-F.4
Denisov, A.5
Gehring, K.6
-
37
-
-
0037187812
-
Structural basis for the unusual properties of 2',5' nucleic acids and their.'complexes with RNA and DNA
-
Premraj, B. J., Raja, S., and Yathindra, N. (2002) Structural basis for the unusual properties of 2',5' nucleic acids and their.'complexes with RNA and DNA. Biophys. Chem. 95, 253-272.
-
(2002)
Biophys. Chem
, vol.95
, pp. 253-272
-
-
Premraj, B.J.1
Raja, S.2
Yathindra, N.3
-
38
-
-
0345305429
-
NMR structure of an α-L-LNA:RNA hybrid: Structural implications for RNase H recognition
-
Nielsen, J. T., Stein, P. C., and Petersen, M. (2003). NMR structure of an α-L-LNA:RNA hybrid: structural implications for RNase H recognition, Nucleic Acids Res. 31, 5858-5867.
-
(2003)
Nucleic Acids Res
, vol.31
, pp. 5858-5867
-
-
Nielsen, J.T.1
Stein, P.C.2
Petersen, M.3
|