Why bicarbonate?

Biochemistry and Cell Biology

Volumn 84, Issue 6, 2006, Pages 930-939

  Casey, Joseph R ^a  

^a UNIVERSITY OF ALBERTA   (Canada)

Author keywords

Bicarbonate metabolism; Bicarbonate transport; pH regulation

Indexed keywords

CELL MEMBRANES; LIPID BILAYERS; METABOLISM; PH EFFECTS; PHOTOSYNTHESIS;

BICARBONATE METABOLISM; BICARBONATE TRANSPORT; MAMMALIAN MEMBRANES; PH REGULATION;

CARBONATES;

BICARBONATE; CALCINEURIN; CARBON DIOXIDE; CARBONATE DEHYDRATASE II; TRANSCRIPTION FACTOR NFAT;

BIOLOGY; CARBON FIXATION; CITRIC ACID CYCLE; CONFERENCE PAPER; HEART MUSCLE CONTRACTILE FORCE; LIPID BILAYER; PERMEABILITY; PH; PHOTOSYNTHESIS;

ACID-BASE EQUILIBRIUM; BICARBONATES; BIOLOGICAL TRANSPORT; CARBONIC ANHYDRASES; HUMANS; HYDROGEN-ION CONCENTRATION; ION TRANSPORT; MODELS, BIOLOGICAL; PHYLOGENY; SODIUM-BICARBONATE SYMPORTERS;

MAMMALIA;

EID: 33947423405     PISSN: 08298211     EISSN: None     Source Type: Journal    
DOI: 10.1139/O06-184     Document Type: Conference Paper

References (81)

1. Alper, S.L., Kopito, R.R., Libresco, S.M., and Lodish, H.F. 1988. Cloning and characterization of a murine Band 3-related cDNA from kidney and a lymphoid cell line. J. Biol. Chem. 263: 17092-17099.
2. - exchangers. J. Nephrol. 15: Suppl. 5, S41-S53.
3. Alvarez, B.V., Fujinaga, J., and Casey, J.R. 2001. Molecular Basis for angiotensin II-induced increase of chloride/bicarbonate exchange in the myocardium. Circ. Res. 89: 1246-1253.
4. Alvarez, B.V., Loiselle, F.B., Supuran, C.T., Schwartz, G.J., and Casey, J.R. 2003. Direct extracellular interaction between carbonic anhydrase IV and the human NBC1 sodium/bicarbonate cotransporter. Biochemistry, 42: 12321-12329. doi:10.1021/bi0353124.
5. Alvarez, B.V., Kieller, D.M., Quon, A.L., Markovich, D., and Casey, J.R. 2004. Slc26a6: a cardiac chloride/hydroxyl exchanger and predominant chloride/bicarbonate exchanger of the heart. J. Physiol. 561: 721-734. doi:10.1113/jphysiol.2004.077339.
6. Alvarez, B.V., Vilas, G.L., and Casey, J.R. 2005. Metabolon disruption: a mechanism that regulates bicarbonate transport. EMBO J. 24: 2499-2511. doi:10.1038/sj.emboj.7600736.
7. Boodhoo, A., and Reithmeier, R.A.F. 1984. Characterization of matrix-bound Band 3, the anion transport protein from human erythrocyte membranes. J. Biol. Chem. 259: 785-790.
8. - cotransporter. J. Biol. Chem. 272: 19111-19114. doi:10.1074/jbc.272.31.19111.
9. Cabantchik, Z.I., and Rothstein, A. 1974. Membrane proteins related to anion permeability of human red blood cells I. Localization of disulfonic stilbene binding sites in proteins involved in permeation. J. Membr. Biol. 15: 207-226.
10. + exchanger. Cardiovasc. Res. 53: 862-868.
11. Casey, J.R., and Reithmeier, R.A.F. 1991. Analysis of the oligomeric state of Band 3, the anion transport protein of the human erythrocyte membrane, by size exclusion high performance liquid chromatography: oligomeric stability and origin of heterogeneity. J. Biol. Chem. 266: 15726-15737.
12. + exchanger inhibition: a new antihypertrophic tool. Circ. Res. 90: 751-753. doi:10.1161/01.RES.0000016836.24179.AE.
13. - exchange on the slow force response to myocardial stretch. Circ. Res. 93: 1082-1088. doi:10.1161/01.RES. 0000102408.25664.01.
14. + exchangers. J. Biol. Chem. 275: 1-4. doi:10.1074/jbc.275.1.1.
15. Dhingra, A., Portis, A.R., Jr., and Daniell, H. 2004. Enhanced translation of a chloroplast-expressed RbcS gene restores small subunit levels and photosynthesis in nuclear RbcS antisense plants. Proc. Natl. Acad. Sci. U.S.A. 101: 6315-6320. doi:10.1073/pnas.0400981101.
16. + exchange prevents hypertrophy, fibrosis, and heart failure in beta(1)-adrenergic receptor transgenic mice. Circ. Res. 90: 814-819. doi:10.1161/01.RES.0000014966. 97486.C0.
17. Ennis, I.L., Alvarez, B.V., Camilion de Hurtado, M.C., and Cingolani, H.E. 1998. Enalapril induces regression of cardiac hypertrophy and normalization of pHi regulatory mechanisms. Hypertension, 31: 961-967.
18. + exchanger inhibition. Hypertension, 41: 1324-1329. doi:10.1161/01.HYP. 0000071180.12012.6E.
19. + exchanger overactivity in essential hypertension. Am. J. Hypertens. 10: 84-93.
20. Frey, N., and Olson, E.N. 2003. Cardiac hypertrophy: the good, the bad, and the ugly. Annu. Rev. Physiol. 65: 45-79. doi:10.1146/annurev.physiol. 65.092101.142243.
21. Frey, N., Katus, H.A., Olson, E.N., and Hill, J.A. 2004. Hypertrophy of the heart: a new therapeutic target? Circulation, 109: 1580-1589. doi:10.1161/01.CIR.0000120390.68287.BB.
22. Friedlingstein, P., and Solomon, S. 2005. Contributions of past and present human generations to committed wanning caused by carbon dioxide. Proc. Natl. Acad. Sci. U.S.A. 102: 10832-10836. doi:10.1073/pnas.0504755102.
23. Fujinaga, J., Tang, X.-B., and Casey, J.R. 1999. Topology of the membrane domain of human anion exchange protein, AE1. J. Biol. Chem. 274: 6626-6633. doi:10.1074/jbc.274.10.6626.
24. - exchanger are achlorhydric. J. Biol. Chem. 279: 30531-30539. doi:10.1074/jbc.M403779200.
25. Groves, J.D., and Tanner, M.J. 1999. Structural model for the organization of the transmembrane spans of the human red-cell anion exchanger (band 3; AE1). Biochem. J. 344: 699-711. doi:10.1042/0264-6021:3440699.
26. Groves, J.D., Wang, L., and Tanner, M.J.A. 1998a. Complementation studies with co-expressed fragments of human red cell band 3 (AE1): the assembly of the anion-transport domain in Xenopus oocytes and a cell-free translation system. Biochem. J. 332: 161-171.
27. Groves, J.D., Wang, L., and Tanner, M.J. 1998b. Functional reassembly of the anion transport domain of human red cell band 3 (AE1) from multiple and non-complementary fragments. FEBS Lett. 433: 223-227. doi:10.1016/S0014-5793(98)00909-0.
28. Ishibashi, K., Sasaki, S., and Marumo, F. 1998. Molecular cloning of a new sodium bicarbonate cotransporter cDNA from human retina. Biochem. Biophys. Res. Commun. 246: 535-538. doi:10.1006/bbrc.1998.8658.
29. 2DIDS. Biochem. Cell Biol. 76: 807-813. doi:10.1139/bcb-76-5-807.
30. + exchange. Am. J. Physiol. 255: H608-H615.
31. Karmazyn, M. 1996. The sodium-hydrogen exchange system in the heart: its role in ischemic and reperfusion injury and therapeutic implications. Can. J. Cardiol. 12: 1074-1082.
32. Karmazyn, M., Liu, Q., Gan, X.T., Brix, B.J., and Fliegel, L. 2003. Aldosterone increases NHE-1 expression and induces NHE-1-dependent hypertrophy in neonatal rat ventricular myocytes. Hypertension, 42: 1171-1176. doi:10.1161/01.HYP.0000102863.23854.0B.
33. - channel regulated by intracellular pH. J. Biol. Chem. 280: 6463-6470. doi:10.1074/jbc.M409162200.
34. Kopito, R.R., and Lodish, H.F. 1985. Primary structure and transmembrane orientation of the murine anion exchange protein. Nature (London), 316: 234-238. doi:10.1038/316234a0.
35. - exchanger. J. Biol. Chem. 265: 462-471.
36. + exchange inhibition reduces hypertrophy and heart failure after myocardial infarction in rats. Am. J. Physiol. Heart Circ. Physiol. 280: H738-H745.
37. Lehninger, A.L. 1982. Principles of biochemistry. Worth Publishers, Inc., New York.
38. Lemieux, M.J., Reithmeier, R.A., and Wang, D.N. 2002. Importance of detergent and phospholipid in the crystallization of the human erythrocyte anion-exchanger membrane domain. J. Struct. Biol. 137: 322-332.
39. + Exchanger. J. Biol. Chem. 277: 36085-36091. doi:10.1074/jbc.M111952200.
40. Lohi, H., Kujala, M., Makela, S., Lehtonen, E., Kestila, M., Saarialho-Kere, U., Markovich, D., and Kere, J. 2002. Functional characterization of three novel tissue-specific anion exchangers: SLC26A7, A8 and A9. J. Biol. Chem. 277: 14246-14254. doi:10.1074/jbc.M111802200.
41. - co-transporter by Carbonic Anhydrase II and Protein Kinase A. Am. J. Physiol. Cell Physiol. 286: C1423-C1433. doi:10.1152/ajpcell.00382.2003.
42. 2 concentrations. Science (Washington, D.C), 312: 1918-1921. doi:10.1126/science.1114722.
43. 3 cotransporter NBCel-A in Xenopus oocytes. J. Biol. Chem. 281: 19241-19250. doi:10.1074/jbc.M602181200.
44. + antiport in lymphocytes. Am. J. Physiol. 256: C428-C433.
45. + exchange inhibitor HOE 694. Ann. Thorac. Surg. 61: 1400-1406. doi:10. 1016/0003-4975(96)00088-4.
46. 2DIDS (4,4′-diisothiocyanodihydrostilbene-2,2′-disulfonic acid) molecule. J. Biol. Chem. 269: 1918-1926.
47. Parry, M.A., Andralojc, P.J., Mitchell, R.A., Madgwick, P.J., and Keys, A.J. 2003. Manipulation of Rubisco: the amount, activity, function and regulation. J. Exp. Bot. 54: 1321-1333. doi:10.1093/jxb/erg141.
48. Pastorekova, S., Parkkila, A.K., Pastorek, J., and Supuran, C. 2004. Carbonic anhydrases: current state of the art, therapeutic applications and future prospects. J. Enzyme Inhib. Med. Chem. 19: 199-229. doi:10.1080/14756360410001689540.
49. + exchanger. Circ. Res. 77: 1192-1200.
50. 2+ exchange after myocardial stretch: underlying mechanism of the slow force response. Circ. Res. 88: 376-382.
51. - exchanger specific to intercalated cells of the outer medullary collecting duct. Am. J. Physiol. Renal Physiol. 286: F161-F169.
52. Popov, M., Li, J., and Reithmeier, R.A. 1999. Transmembrane folding of the human erythrocyte anion exchanger (AE1, Band 3) determined by scanning and insertional N-glycosylation mutagenesis. Biochem. J. 339: 269-279. doi:10.1042/0264-6021:3390269.
53. Pushkin, A., Abuladze, N., Newman, D., Lee, I., Xu, G., and Kurtz, I. 2000. Two C-terminal variants of NBC4, a new member of the sodium bicarbonate cotransporter family: cloning, characterization, and localization. IUBMB Life, 50: 13-19.
54. Reithmeier, R.A.F., Landolt-Marticorena, C., Casey, J.R., Sarabia, V.E., and Wang, J. 1993. Molecular characterization of the erythrocyte chloride bicarbonate exchanger. In Molecular biology and function of carrier proteins. Rockefeller University Press, Chicago, Illinois. pp. 161-168.
55. - cotransporter. Nature (London), 387: 409-413. doi:10.1038/387409a0.
56. + driven anion exchanger (NDAE1): a new bicarbonate transporter. J. Biol. Chem. 275: 24552-24559. doi:10.1074/jbc.M003476200.
57. Salhany, J.M. 1990. Erythrocyte band 3 protein. CRC Press, Boca Raton, Florida.
58. Schweinfest, C.W., Henderson, K.W., Suster, S., Kondoh, N., and Papas, T.S. 1993. Identification of a colon mucosa gene that is down-regulated in colon adenomas and adenocarcinomas. Proc. Natl. Acad. Sci. U.S.A. 90: 4166-4170. doi:10.1073/pnas.90.9.4166.
59. Scott, D.A., Wang, R., Kreman, T.M., Sheffield, V.C., and Karnishki, L.P. 1999. The Pendred syndrome gene encodes a chloride-iodide transport protein. Nat. Genet. 21: 440-443.
60. Srere, P.A. 1987. Complexes of sequential metabolic enzymes. Annu. Rev. Biochem. 56: 89-124. doi:10.1146/annurev.bi.56.070187.000513.
61. Sterling, D., and Casey, J.R. 2002. Bicarbonate transport proteins. Biochem. Cell Biol. 80: 483-497. doi:10.1139/o02-152.
62. Sterling, D., Reithmeier, R.A.F., and Casey, J.R. 2001a. Carbonic anhydrase: in the driver's seat for bicarbonate transport. JOP, 2: 165-170.
63. Sterling, D., Reithmeier, R.A., and Casey, J.R. 2001b. A rransport metabolon. functional interaction of carbonic anhydrase II and chloride/bicarbonate exchangers. J. Biol. Chem. 276: 47886-47894.
64. - exchanger binds carbonic anhydrase IV. J. Biol. Chem. 277: 25239-25246. doi:10.1074/jbc. M202562200.
65. Sterling, D Brown, N., Supuran, C.T., and Casey, J.R. 2002b. The functional and physical relationship between the downregulated in adenoma bicarbonate transporter and carbonic anhydrase II. Am. J. Physiol. Cell Physiol. 283: C1522-C1529.
66. Tang, X.B., Fujinaga, J., Kopito, R., and Casey, J.R. 1998. Topology of the region surrounding Glu681 of human AE1 protein, the erythrocyte anion exchanger. J. Biol. Chem. 273: 22545-22553. doi:10.1074/jbc.273.35.22545.
67. Tang, X.-B., Kovacs, M., Sterling, D., and Casey, J.R. 1999. Identification of residues lining the translocation pore of human AE1, plasma membrane anion exchange protein. J. Biol. Chem. 274: 3557-3564. doi:10.1074/jbc.274.6.3557.
68. Tatishchev, S., Abuladze, N., Pushkin, A., Newman, D., Liu, W., Weeks, D., Sachs, G., and Kurtz, I. 2003. Identification of membrane topography of the electrogenic sodium bicarbonate cotransporter pNBC1 by in vitro transcription/translation. Biochemistry, 42: 755-765.
69. Taylor, A.M., Zhu, Q., and Casey, J.R. 2001. Cysteine-directed cross-linking localizes regions of the human erythrocyte anion exchange protein (AE1) relative to the dimeric interface. Biochem. J. 359: 661-668. doi:10.1042/0264-6021:3590661.
70. - transporter superfamily is an apical anion exchanger of beta-intercalated cells in the kidney. J. Biol. Chem. 276: 8180-8189. doi:10.1074/jbc.M004513200.
71. Vandenberg, J.I., Metcalfe, J.C, and Grace, A.A. 1993. Mechanisms of pHi recovery after global ischemia in the perfused heart. Circ. Res. 72: 993-1003.
72. Vaughan-Jones, R.D. 1986. An investigation of chloride-bicarbonate exchange in sheep cardiac purkinje fibre. J. Physiol. 379: 377-406.
73. - exchanger. J. Biol. Chem. 273: 28430-28437. doi:10.1074/jbc.273.43.28430.
74. - anion exchanger AE1. Biochemistry, 39: 5527-5533. doi:10.1021/bi992564p.
75. - anion exchanger binding site to the amino-terminal region of carbonic anhydrase II. Biochemistry, 39: 13344-13349. doi:10.1021/bi0015111.
76. Waldegger, S., Moschen, I., Ramirez, A., Smith, R.J., Ayadi, H., Lang, F., and Kubisch, C. 2001. Cloning and characterization of SLC26A6, a novel member of the solute carrier 26 gene family. Genomics, 72: 43-50. doi:10.1006/geno.2000.6445.
77. Wang, D.N., Kuhlbrandt, W., Sarabia, V., and Reithmeier, R.A.F. 1993. Two-dimensional structure of the membrane domain of human band 3, the anion transport protein of the erythrocyte membrane. EMBO J. 12: 2233-2239.
78. Wang, D.N., Sarabia, V.E., Reithmeier, R.A., and Kuhlbrandt, W. 1994. Three-dimensional map of the dimeric membrane domain of the human erythrocyte anion exchanger, Band 3. EMBO J. 13: 3230-3235.
79. + exchange inhibition attenuates hypertrophy and heart failure in 1-week postinfarction rat myocardium. Am. J. Physiol. Heart Circ. Physiol. 278: H300-H304.
80. Zhang, D., Kiyatkin, A., Bolin, J.T., and Low, P.S. 2000. Crystallographic structure and functional interpretation of the cytoplasmic domain of erythrocyte membrane band 3. Blood, 96: 2925-2933.
81. Zhu, Q., Lee, D.W.K., and Casey, J.R. 2003. Novel Topology in C-terminal Region of the Human Plasma membrane anion exchanger, AE1. J. Biol. Chem. 278: 3112-3120. doi:10.1074/jbc.M207797200.