-
1
-
-
0028132223
-
Iron and manganese in anaerobic respiration: Environmental significance, physiology, and regulation
-
Nealson, K. H., and Saffarini, D. (1994) Iron and manganese in anaerobic respiration: Environmental significance, physiology, and regulation, Annu. Rev. Microbiol. 48, 311-343.
-
(1994)
Annu. Rev. Microbiol
, vol.48
, pp. 311-343
-
-
Nealson, K.H.1
Saffarini, D.2
-
2
-
-
0346887121
-
The distribution of RNA polymerase in Escherichia coli is dynamic and sensitive to environmental cues
-
Cabrera, J. E., and Jin, D. J. (2003) The distribution of RNA polymerase in Escherichia coli is dynamic and sensitive to environmental cues, Mol. Microbiol. 50, 1493-1505.
-
(2003)
Mol. Microbiol
, vol.50
, pp. 1493-1505
-
-
Cabrera, J.E.1
Jin, D.J.2
-
3
-
-
33744770679
-
Active transcription of rRNA operons is a driving force for the distribution of RNA polymerase in bacteria: Effect of extrachromosomal copies of rrnB on the in vivo localization of RNA polymerase
-
Cabrera, J. E., and Jin, D. J. (2006) Active transcription of rRNA operons is a driving force for the distribution of RNA polymerase in bacteria: Effect of extrachromosomal copies of rrnB on the in vivo localization of RNA polymerase, J. Bacteriol. 188, 4007-4014.
-
(2006)
J. Bacteriol
, vol.188
, pp. 4007-4014
-
-
Cabrera, J.E.1
Jin, D.J.2
-
4
-
-
33750529760
-
Coupling the distribution of RNA polymerase to global gene regulation and the dynamic structure of the bacterial nucleoid in Escherichia coli
-
Jin, D. J., and Cabrera, J. E. (2006) Coupling the distribution of RNA polymerase to global gene regulation and the dynamic structure of the bacterial nucleoid in Escherichia coli, J. Struct. Biol. 156, 284-291.
-
(2006)
J. Struct. Biol
, vol.156
, pp. 284-291
-
-
Jin, D.J.1
Cabrera, J.E.2
-
5
-
-
26444521691
-
Global transcriptome analysis of Shewanella oneidensis MR-1 exposed to different terminal electron acceptors
-
Beliaev, A. S., Klingeman, D. M., Klappenbach, J. A., Wu, L., Romine, M. F., Tiedje, J. M., Nealson, K. H., Fredrickson, J. K., and Zhou, J. (2005) Global transcriptome analysis of Shewanella oneidensis MR-1 exposed to different terminal electron acceptors, J. Bacteriol. 187, 7138-7145.
-
(2005)
J. Bacteriol
, vol.187
, pp. 7138-7145
-
-
Beliaev, A.S.1
Klingeman, D.M.2
Klappenbach, J.A.3
Wu, L.4
Romine, M.F.5
Tiedje, J.M.6
Nealson, K.H.7
Fredrickson, J.K.8
Zhou, J.9
-
6
-
-
13844316454
-
-
Kolker, E., Picone, A. F., Galperin, M. Y., Romine, M. F., Higdon, R., Makarova, K. S., Kolker, N., Anderson, G. A., Qiu, X., Auberry, K. J., Babnigg, G., Beliaev, A. S., Edlefsen, P., Elias, D. A., Gorby, Y. A., Holzman, T., Klappenbach, J. A., Konstantinidis, K. T., Land, M. L., Lipton, M. S., McCue, L. A., Monroe, M., Pasa-Tolic, L., Pinchuk, G., Purvine, S., Serres, M. H., Tsapin, S., Zakrajsek, B. A., Zhu, W., Zhou, J., Larimer, F. W., Lawrence, C. E., Riley, M., Collart, F. R., Yates, J. R., III, Smith, R. D., Giometti, C. S., Nealson, K. H., Fredrickson, J. K., and Tiedje, J. M. (2005) Global profiling of Shewanella oneidensis MR-1: Expression of hypothetical genes and improved functional annotations, Proc. Natl. Acad. Sci. U.S.A. 102, 2099-2104.
-
Kolker, E., Picone, A. F., Galperin, M. Y., Romine, M. F., Higdon, R., Makarova, K. S., Kolker, N., Anderson, G. A., Qiu, X., Auberry, K. J., Babnigg, G., Beliaev, A. S., Edlefsen, P., Elias, D. A., Gorby, Y. A., Holzman, T., Klappenbach, J. A., Konstantinidis, K. T., Land, M. L., Lipton, M. S., McCue, L. A., Monroe, M., Pasa-Tolic, L., Pinchuk, G., Purvine, S., Serres, M. H., Tsapin, S., Zakrajsek, B. A., Zhu, W., Zhou, J., Larimer, F. W., Lawrence, C. E., Riley, M., Collart, F. R., Yates, J. R., III, Smith, R. D., Giometti, C. S., Nealson, K. H., Fredrickson, J. K., and Tiedje, J. M. (2005) Global profiling of Shewanella oneidensis MR-1: Expression of hypothetical genes and improved functional annotations, Proc. Natl. Acad. Sci. U.S.A. 102, 2099-2104.
-
-
-
-
7
-
-
18144396807
-
Global transcriptional programs reveal a carbon source foraging strategy by Escherichia coli
-
Liu, M., Durfee, T., Cabrera, J. E., Zhao, K., Jin, D. J., and Blattner, F. R. (2005) Global transcriptional programs reveal a carbon source foraging strategy by Escherichia coli, J. Biol. Chem. 280, 15921-15927.
-
(2005)
J. Biol. Chem
, vol.280
, pp. 15921-15927
-
-
Liu, M.1
Durfee, T.2
Cabrera, J.E.3
Zhao, K.4
Jin, D.J.5
Blattner, F.R.6
-
8
-
-
0042233986
-
Regulated recruitment and cooperativity in the design of biological regulatory systems
-
Ptashne, M. (2003) Regulated recruitment and cooperativity in the design of biological regulatory systems, Philos. Trans. R. Soc. London, Ser. A 361, 1223-1234.
-
(2003)
Philos. Trans. R. Soc. London, Ser. A
, vol.361
, pp. 1223-1234
-
-
Ptashne, M.1
-
9
-
-
0030960672
-
Transcriptional activation by recruitment
-
Ptashne, M., and Gann, A. (1997) Transcriptional activation by recruitment, Nature 386, 569-577.
-
(1997)
Nature
, vol.386
, pp. 569-577
-
-
Ptashne, M.1
Gann, A.2
-
10
-
-
0025997230
-
Growth phase-dependent modification of RNA polymerase in Escherichia coli
-
Ozaki, M., Wada, A., Fujita, N., and Ishihama, A. (1991) Growth phase-dependent modification of RNA polymerase in Escherichia coli, Mol. Gen. Genet. 230, 17-23.
-
(1991)
Mol. Gen. Genet
, vol.230
, pp. 17-23
-
-
Ozaki, M.1
Wada, A.2
Fujita, N.3
Ishihama, A.4
-
11
-
-
33644811688
-
One-step, non-denaturing isolation of an RNA polymerase enzyme complex using an improved multi-use affinity probe resin
-
Mayer, M. U., Shi, L., and Squier, T. C. (2005) One-step, non-denaturing isolation of an RNA polymerase enzyme complex using an improved multi-use affinity probe resin, Mol. BioSyst. 1, 53-56.
-
(2005)
Mol. BioSyst
, vol.1
, pp. 53-56
-
-
Mayer, M.U.1
Shi, L.2
Squier, T.C.3
-
12
-
-
33645723896
-
Differential label-free quantitative proteomic analysis of Shewanella oneidensis cultured under aerobic and suboxic conditions by accurate mass and time tag approach
-
Fang, R., Elias, D. A., Monroe, M. E., Shen, Y., McIntosh, M., Wang, P., Goddard, C. D., Callister, S. J., Moore, R. J., Gorby, Y. A., Adkins, J. N., Fredrickson, J. K., Lipton, M. S., and Smith, R. D. (2006) Differential label-free quantitative proteomic analysis of Shewanella oneidensis cultured under aerobic and suboxic conditions by accurate mass and time tag approach, Mol. Cell. Proteomics 5, 714-725.
-
(2006)
Mol. Cell. Proteomics
, vol.5
, pp. 714-725
-
-
Fang, R.1
Elias, D.A.2
Monroe, M.E.3
Shen, Y.4
McIntosh, M.5
Wang, P.6
Goddard, C.D.7
Callister, S.J.8
Moore, R.J.9
Gorby, Y.A.10
Adkins, J.N.11
Fredrickson, J.K.12
Lipton, M.S.13
Smith, R.D.14
-
13
-
-
0037140742
-
New biarsenical ligands and tetracysteine motifs for protein labeling in vitro and in vivo: Synthesis and biological applications
-
Adams, S. R., Campbell, R. E., Gross, L. A., Martin, B. R., Walkup, G. K., Yao, Y., Llopis, J., and Tsien, R. Y. (2002) New biarsenical ligands and tetracysteine motifs for protein labeling in vitro and in vivo: Synthesis and biological applications, J. Am. Chem. Soc. 124, 6063-6076.
-
(2002)
J. Am. Chem. Soc
, vol.124
, pp. 6063-6076
-
-
Adams, S.R.1
Campbell, R.E.2
Gross, L.A.3
Martin, B.R.4
Walkup, G.K.5
Yao, Y.6
Llopis, J.7
Tsien, R.Y.8
-
14
-
-
33745213371
-
CrAsH: A biarsenical multi-use affinity probe with low non-specific fluorescence
-
Cao, H., Chen, B., Squier, T. C., and Mayer, M. U. (2006) CrAsH: A biarsenical multi-use affinity probe with low non-specific fluorescence, Chem. Commun., 2601-2603.
-
(2006)
Chem. Commun
, pp. 2601-2603
-
-
Cao, H.1
Chen, B.2
Squier, T.C.3
Mayer, M.U.4
-
15
-
-
0025018122
-
Respiration-linked proton translocation coupled to anaerobic reduction of manganese(IV) and iron(III) in Shewanella putrefaciens MR-1
-
Myers, C. R., and Nealson, K. H. (1990) Respiration-linked proton translocation coupled to anaerobic reduction of manganese(IV) and iron(III) in Shewanella putrefaciens MR-1, J. Bacteriol. 172, 6232-6238.
-
(1990)
J. Bacteriol
, vol.172
, pp. 6232-6238
-
-
Myers, C.R.1
Nealson, K.H.2
-
16
-
-
0032433868
-
Bacterial reduction of crystalline Fe3+ oxides in single phase suspensions and subsurface materials
-
Zachara, J. M., Fredrickson, J. K., Li, S., Kennedy, D. W., Smith, S. C., and Gassman, P. L. (1998) Bacterial reduction of crystalline Fe3+ oxides in single phase suspensions and subsurface materials, Am. Mineral. 83, 1426-1443.
-
(1998)
Am. Mineral
, vol.83
, pp. 1426-1443
-
-
Zachara, J.M.1
Fredrickson, J.K.2
Li, S.3
Kennedy, D.W.4
Smith, S.C.5
Gassman, P.L.6
-
17
-
-
7044241336
-
Validation of Shewanella oneidensis MR-1 small proteins by AMT tag-based proteome analysis
-
Romine, M. F., Elias, D. A., Monroe, M. E., Auberry, K., Fang, R., Fredrickson, J. K., Anderson, G. A., Smith, R. D., and Lipton, M. S. (2004) Validation of Shewanella oneidensis MR-1 small proteins by AMT tag-based proteome analysis, OMICS 8, 239-254.
-
(2004)
OMICS
, vol.8
, pp. 239-254
-
-
Romine, M.F.1
Elias, D.A.2
Monroe, M.E.3
Auberry, K.4
Fang, R.5
Fredrickson, J.K.6
Anderson, G.A.7
Smith, R.D.8
Lipton, M.S.9
-
18
-
-
33644653354
-
Proteomic analysis of human meibomian gland secretions
-
Tsai, P. S., Evans, J. E., Green, K. M., Sullivan, R. M., Schaumberg, D. A., Richards, S. M., Dana, M. R., and Sullivan, D. A. (2006) Proteomic analysis of human meibomian gland secretions, Br. J. Ophthalmol. 90, 372-377.
-
(2006)
Br. J. Ophthalmol
, vol.90
, pp. 372-377
-
-
Tsai, P.S.1
Evans, J.E.2
Green, K.M.3
Sullivan, R.M.4
Schaumberg, D.A.5
Richards, S.M.6
Dana, M.R.7
Sullivan, D.A.8
-
19
-
-
33745611162
-
Endogenously nitrated proteins in mouse brain: Links to neurodegenerative disease
-
Sacksteder, C. A., Qian, W. J., Knyushko, T. V., Wang, H., Chin, M. H., Lacan, G., Melega, W. P., Camp, D. G., II, Smith, R. D., Smith, D. J., Squier, T. C., and Bigelow, D. J. (2006) Endogenously nitrated proteins in mouse brain: Links to neurodegenerative disease, Biochemistry 45, 8009-8022.
-
(2006)
Biochemistry
, vol.45
, pp. 8009-8022
-
-
Sacksteder, C.A.1
Qian, W.J.2
Knyushko, T.V.3
Wang, H.4
Chin, M.H.5
Lacan, G.6
Melega, W.P.7
Camp II, D.G.8
Smith, R.D.9
Smith, D.J.10
Squier, T.C.11
Bigelow, D.J.12
-
20
-
-
0003490276
-
-
10th ed, Molecular Probes, Inc, Eugene, OR
-
Haugland, R. P. (2005) in Handbook of Fluorescent Probes and Research Chemicals, 10th ed., Molecular Probes, Inc., Eugene, OR.
-
(2005)
Handbook of Fluorescent Probes and Research Chemicals
-
-
Haugland, R.P.1
-
21
-
-
0035089132
-
Cytoplasmic RNA Polymerase in Escherichia coli
-
Shepherd, N., Dennis, P., and Bremer, H. (2001) Cytoplasmic RNA Polymerase in Escherichia coli, J. Bacteriol. 183, 2527-2534.
-
(2001)
J. Bacteriol
, vol.183
, pp. 2527-2534
-
-
Shepherd, N.1
Dennis, P.2
Bremer, H.3
-
22
-
-
33745160404
-
Large-scale identification of protein-protein interaction of Escherichia coli K-12
-
Arifuzzaraan, M., Maeda, M., Itoh, A., Nishikata, K., Takita, C., Saito, R., Ara, T., Nakahigashi, K., Huang, H. C., Hirai, A., Tsuzuki, K., Nakamura, S., Altaf-Ul-Amin, M., Oshima, T., Baba, T., Yamamoto, N., Kawamura, T., Ioka-Nakamichi, T., Kitagawa, M., Tomita, M., Kanaya, S., Wada, C., and Mori, H. (2006) Large-scale identification of protein-protein interaction of Escherichia coli K-12, Genome Res. 16, 686-691.
-
(2006)
Genome Res
, vol.16
, pp. 686-691
-
-
Arifuzzaraan, M.1
Maeda, M.2
Itoh, A.3
Nishikata, K.4
Takita, C.5
Saito, R.6
Ara, T.7
Nakahigashi, K.8
Huang, H.C.9
Hirai, A.10
Tsuzuki, K.11
Nakamura, S.12
Altaf-Ul-Amin, M.13
Oshima, T.14
Baba, T.15
Yamamoto, N.16
Kawamura, T.17
Ioka-Nakamichi, T.18
Kitagawa, M.19
Tomita, M.20
Kanaya, S.21
Wada, C.22
Mori, H.23
more..
-
23
-
-
0001229341
-
Calculation of hydrodynamic properties of globular proteins from their atomic-level structure
-
Garcia, De La Torre, J., Huertas, M. L., and Carrasco, B. (2000) Calculation of hydrodynamic properties of globular proteins from their atomic-level structure, Biophys. J. 78, 719-730.
-
(2000)
Biophys. J
, vol.78
, pp. 719-730
-
-
Garcia, D.1
La Torre, J.2
Huertas, M.L.3
Carrasco, B.4
-
24
-
-
0018821540
-
Translation initiation factor 2 alters transcriptional selectivity of Escherichia coli ribonucleic acid polymerase
-
Travers, A. A., Debenham, P. G., and Pongs, O. (1980) Translation initiation factor 2 alters transcriptional selectivity of Escherichia coli ribonucleic acid polymerase, Biochemistry 19, 1651-1656.
-
(1980)
Biochemistry
, vol.19
, pp. 1651-1656
-
-
Travers, A.A.1
Debenham, P.G.2
Pongs, O.3
-
25
-
-
14544287732
-
Escherichia coli ribosomal RNA transcription: Regulatory roles for ppGpp, NTPs, architectural proteins and a polymerase-binding protein
-
Gralla, J. D. (2005) Escherichia coli ribosomal RNA transcription: Regulatory roles for ppGpp, NTPs, architectural proteins and a polymerase-binding protein, Mol. Microbiol. 55, 973-977.
-
(2005)
Mol. Microbiol
, vol.55
, pp. 973-977
-
-
Gralla, J.D.1
-
26
-
-
0034982311
-
Microbial molecular chaperones
-
Lund, P. A. (2001) Microbial molecular chaperones, Adv. Microb. Physiol. 44, 93-140.
-
(2001)
Adv. Microb. Physiol
, vol.44
, pp. 93-140
-
-
Lund, P.A.1
-
27
-
-
23644454655
-
The E. coli NusA carboxy-terminal domains are structurally similar and show specific RNAP- and λN interaction
-
Eisenmann, A., Schwarz, S., Prasch, S., Schweimer, K., and Rosch, P. (2005) The E. coli NusA carboxy-terminal domains are structurally similar and show specific RNAP- and λN interaction, Protein Sci. 14, 2018-2029.
-
(2005)
Protein Sci
, vol.14
, pp. 2018-2029
-
-
Eisenmann, A.1
Schwarz, S.2
Prasch, S.3
Schweimer, K.4
Rosch, P.5
-
28
-
-
2442657884
-
Interactions between the nitrogen signal transduction protein PII and N-acetyl glutamate kinase in organisms that perform oxygenic photosynthesis
-
Burillo, S., Luque, I., Fuentes, I., and Contreras, A. (2004) Interactions between the nitrogen signal transduction protein PII and N-acetyl glutamate kinase in organisms that perform oxygenic photosynthesis, J. Bacteriol. 186, 3346-3354.
-
(2004)
J. Bacteriol
, vol.186
, pp. 3346-3354
-
-
Burillo, S.1
Luque, I.2
Fuentes, I.3
Contreras, A.4
-
29
-
-
0036436247
-
Agrobacterium flagellar switch gene fliG is liquid inducible and important for virulence
-
Li, L., Jia, Y. H., and Pan, S. Q. (2002) Agrobacterium flagellar switch gene fliG is liquid inducible and important for virulence, Can. J. Microbiol. 48, 753-758.
-
(2002)
Can. J. Microbiol
, vol.48
, pp. 753-758
-
-
Li, L.1
Jia, Y.H.2
Pan, S.Q.3
-
30
-
-
33646032718
-
A complex of DNA gyrase and RNA polymerase fosters transcription in Mycobacterium smegmatis
-
Gupta, R., China, A., Manjunatha, U. H., Ponnanna, N. M., and Nagaraja, V. (2006) A complex of DNA gyrase and RNA polymerase fosters transcription in Mycobacterium smegmatis, Biochem. Biophys. Res. Commun. 343, 1141-1145.
-
(2006)
Biochem. Biophys. Res. Commun
, vol.343
, pp. 1141-1145
-
-
Gupta, R.1
China, A.2
Manjunatha, U.H.3
Ponnanna, N.M.4
Nagaraja, V.5
-
31
-
-
0042430577
-
Formate dehydrogenase: A versatile enzyme in changing environments
-
Jormakka, M., Byrne, B., and Iwata, S. (2003) Formate dehydrogenase: A versatile enzyme in changing environments, Curr. Opin. Struct. Biol. 13, 418-423.
-
(2003)
Curr. Opin. Struct. Biol
, vol.13
, pp. 418-423
-
-
Jormakka, M.1
Byrne, B.2
Iwata, S.3
-
32
-
-
33745449038
-
Isolation of a high-affinity functional protein complex between OmcA and MtrC: Two outer membrane decaheme c-type cytochromes of Shewanella oneidensis MR-1
-
Shi, L., Chen, B., Wang, Z., Elias, D. A., Mayer, M. U., Gorby, Y. A., Ni, S., Lower, B. H., Kennedy, D. W., Wunschel, D. S., Mottaz, H. M., Marshall, M. J., Hill, E. A., Beliaev, A. S., Zachara, J. M., Fredrickson, J. K., and Squier, T. C. (2006) Isolation of a high-affinity functional protein complex between OmcA and MtrC: Two outer membrane decaheme c-type cytochromes of Shewanella oneidensis MR-1, J. Bacteriol. 188, 4705-4714.
-
(2006)
J. Bacteriol
, vol.188
, pp. 4705-4714
-
-
Shi, L.1
Chen, B.2
Wang, Z.3
Elias, D.A.4
Mayer, M.U.5
Gorby, Y.A.6
Ni, S.7
Lower, B.H.8
Kennedy, D.W.9
Wunschel, D.S.10
Mottaz, H.M.11
Marshall, M.J.12
Hill, E.A.13
Beliaev, A.S.14
Zachara, J.M.15
Fredrickson, J.K.16
Squier, T.C.17
-
33
-
-
13444283630
-
Interaction network containing conserved and essential protein complexes in Escherichia coli
-
Butland, G., Peregrin-Alvarez, J. M., Li, J., Yang, W., Yang, X., Canadien, V., Starostine, A., Richards, D., Beattie, B., Krogan, N., Davey, M., Parkinson, J., Greenblatt, J., and Emili, A. (2005) Interaction network containing conserved and essential protein complexes in Escherichia coli, Nature 433, 531-537.
-
(2005)
Nature
, vol.433
, pp. 531-537
-
-
Butland, G.1
Peregrin-Alvarez, J.M.2
Li, J.3
Yang, W.4
Yang, X.5
Canadien, V.6
Starostine, A.7
Richards, D.8
Beattie, B.9
Krogan, N.10
Davey, M.11
Parkinson, J.12
Greenblatt, J.13
Emili, A.14
-
34
-
-
0025791939
-
Suppressor mutations in rpoA suggest that OmpR controls transcription by direct interaction with the α subunit of RNA polymerase
-
Slauch, J. M., Russo, F. D., and Silhavy, T. J. (1991) Suppressor mutations in rpoA suggest that OmpR controls transcription by direct interaction with the α subunit of RNA polymerase, J. Bacteriol. 173, 7501-7510.
-
(1991)
J. Bacteriol
, vol.173
, pp. 7501-7510
-
-
Slauch, J.M.1
Russo, F.D.2
Silhavy, T.J.3
-
35
-
-
0035695190
-
Growth-dependent DNA breakage and cell death in a gyrase mutant of Salmonella
-
Gari, E., Bossi, L., and Figueroa-Bossi, N. (2001) Growth-dependent DNA breakage and cell death in a gyrase mutant of Salmonella, Genetics 159, 1405-1414.
-
(2001)
Genetics
, vol.159
, pp. 1405-1414
-
-
Gari, E.1
Bossi, L.2
Figueroa-Bossi, N.3
-
36
-
-
0032947006
-
tRNA synthetase mutants of Escherichia coli K-12 are resistant to the gyrase inhibitor novobiocin
-
Jovanovic, M., Lilic, M., Janjusevic, R., Jovanovic, G., and Savic, D. J. (1999) tRNA synthetase mutants of Escherichia coli K-12 are resistant to the gyrase inhibitor novobiocin, J. Bacteriol. 181, 2979-2983.
-
(1999)
J. Bacteriol
, vol.181
, pp. 2979-2983
-
-
Jovanovic, M.1
Lilic, M.2
Janjusevic, R.3
Jovanovic, G.4
Savic, D.J.5
-
37
-
-
33744522928
-
Defining the role of the Escherichia coli chaperone SecB using comparative proteomics
-
Baars, L., Ytterberg, A. J., Drew, D., Wagner, S., Thilo, C., van Wijk, K. J., and de Gier, J. W. (2006) Defining the role of the Escherichia coli chaperone SecB using comparative proteomics, J. Biol. Chem. 281, 10024-10034.
-
(2006)
J. Biol. Chem
, vol.281
, pp. 10024-10034
-
-
Baars, L.1
Ytterberg, A.J.2
Drew, D.3
Wagner, S.4
Thilo, C.5
van Wijk, K.J.6
de Gier, J.W.7
-
38
-
-
0346366809
-
Structural and functional studies of FkpA from Escherichia coli, a cis/trans peptidyl-prolyl isomerase with chaperone activity
-
Saul, F. A., Arie, J. P., Vulliez-le Normand, B., Kahn, R., Betton, J. M., and Bentley, G. A. (2004) Structural and functional studies of FkpA from Escherichia coli, a cis/trans peptidyl-prolyl isomerase with chaperone activity, J. Mol. Biol. 335, 595-608.
-
(2004)
J. Mol. Biol
, vol.335
, pp. 595-608
-
-
Saul, F.A.1
Arie, J.P.2
Vulliez-le Normand, B.3
Kahn, R.4
Betton, J.M.5
Bentley, G.A.6
-
39
-
-
18844439956
-
Mechanistic insights on the folding of a large ribozyme during transcription
-
Wong, T., Sosnick, T. R., and Pan, T. (2005) Mechanistic insights on the folding of a large ribozyme during transcription, Biochemistry 44, 7535-7542.
-
(2005)
Biochemistry
, vol.44
, pp. 7535-7542
-
-
Wong, T.1
Sosnick, T.R.2
Pan, T.3
-
40
-
-
11144353051
-
Glyceraldehyde-3-phosphate dehydrogenase and actin associate with RNA polymerase II and interact with its Rpb7 subunit
-
Mitsuzawa, H., Kimura, M., Kanda, E., and Ishihama, A. (2005) Glyceraldehyde-3-phosphate dehydrogenase and actin associate with RNA polymerase II and interact with its Rpb7 subunit, FEBS Lett. 579, 48-52.
-
(2005)
FEBS Lett
, vol.579
, pp. 48-52
-
-
Mitsuzawa, H.1
Kimura, M.2
Kanda, E.3
Ishihama, A.4
-
41
-
-
0028935282
-
Heat shock-dependent transcriptional activation of the metA gene of Escherichia coli
-
Biran, D., Brot, N., Weissbach, H., and Ron, E. Z. (1995) Heat shock-dependent transcriptional activation of the metA gene of Escherichia coli, J. Bacteriol. 177, 1374-1379.
-
(1995)
J. Bacteriol
, vol.177
, pp. 1374-1379
-
-
Biran, D.1
Brot, N.2
Weissbach, H.3
Ron, E.Z.4
-
42
-
-
25144439855
-
Signal transduction protein PII phosphatase PphA is required for light-dependent control of nitrate utilization in Synechocystis sp. strain PCC 6803
-
Kloft, N., and Forchhammer, K. (2005) Signal transduction protein PII phosphatase PphA is required for light-dependent control of nitrate utilization in Synechocystis sp. strain PCC 6803, J. Bacteriol. 187, 6683-6690.
-
(2005)
J. Bacteriol
, vol.187
, pp. 6683-6690
-
-
Kloft, N.1
Forchhammer, K.2
-
43
-
-
0034444676
-
Coupling of flagellar gene expression to flagellar assembly in Salmonella enterica serovar typhimurium and Escherichia coli
-
Chilcott, G. S., and Hughes, K. T. (2000) Coupling of flagellar gene expression to flagellar assembly in Salmonella enterica serovar typhimurium and Escherichia coli, Microbiol. Mol. Biol. Rev. 64, 694-708.
-
(2000)
Microbiol. Mol. Biol. Rev
, vol.64
, pp. 694-708
-
-
Chilcott, G.S.1
Hughes, K.T.2
-
44
-
-
0032725978
-
Identification of the miaB gene, involved in methylthiolation of isopentenylated A37 derivatives in the tRNA of Salmonella typhimurium and Escherichia coli
-
Esberg, B., Leung, H. C., Tsui, H. C., Bjork, G. R., and Winkler, M. E. (1999) Identification of the miaB gene, involved in methylthiolation of isopentenylated A37 derivatives in the tRNA of Salmonella typhimurium and Escherichia coli, J. Bacteriol. 181, 7256-7265.
-
(1999)
J. Bacteriol
, vol.181
, pp. 7256-7265
-
-
Esberg, B.1
Leung, H.C.2
Tsui, H.C.3
Bjork, G.R.4
Winkler, M.E.5
-
45
-
-
0029077732
-
An anticodon sequence mutant of Escherichia coli initiator tRNA: Possible importance of a newly acquired base modification next to the anticodon on its activity in initiation
-
Mangroo, D., Limbach, P. A., McCloskey, J. A., and RajBhandary, U. L. (1995) An anticodon sequence mutant of Escherichia coli initiator tRNA: Possible importance of a newly acquired base modification next to the anticodon on its activity in initiation, J. Bacteriol. 177, 2858-2862.
-
(1995)
J. Bacteriol
, vol.177
, pp. 2858-2862
-
-
Mangroo, D.1
Limbach, P.A.2
McCloskey, J.A.3
RajBhandary, U.L.4
-
46
-
-
9144220291
-
MiaB protein is a bifunctional radical-S-adenosylmethionine enzyme involved in thiolation and methylation of tRNA
-
Pierrel, F., Douki, T., Fontecave, M., and Atta, M. (2004) MiaB protein is a bifunctional radical-S-adenosylmethionine enzyme involved in thiolation and methylation of tRNA, J. Biol. Chem. 279, 47555-47563.
-
(2004)
J. Biol. Chem
, vol.279
, pp. 47555-47563
-
-
Pierrel, F.1
Douki, T.2
Fontecave, M.3
Atta, M.4
-
47
-
-
0242500984
-
Isolation of Qβ polymerase complexes containing mutant species of elongation factor Tu
-
Mathu, S. G., Knudsen, C. R., van Duin, J., and Kraal, B. (2003) Isolation of Qβ polymerase complexes containing mutant species of elongation factor Tu, J. Chromatogr., B: Anal. Technol. Biomed. Life Sci. 786, 279-286.
-
(2003)
J. Chromatogr., B: Anal. Technol. Biomed. Life Sci
, vol.786
, pp. 279-286
-
-
Mathu, S.G.1
Knudsen, C.R.2
van Duin, J.3
Kraal, B.4
-
48
-
-
0028906657
-
A mutation in the rpoA gene encoding the α subunit of RNA polymerase that affects metE-metR transcription in Escherichia coli
-
Jafri, S., Urbanowski, M. L., and Stauffer, G. V. (1995) A mutation in the rpoA gene encoding the α subunit of RNA polymerase that affects metE-metR transcription in Escherichia coli, J. Bacteriol. 177, 524-529.
-
(1995)
J. Bacteriol
, vol.177
, pp. 524-529
-
-
Jafri, S.1
Urbanowski, M.L.2
Stauffer, G.V.3
-
49
-
-
0018860566
-
Studies of RNA chain initiation by Escherichia coli RNA polymerase bound to T7 DNA. Direct analysis of the kinetics of RNA chain initiation at T7 promoter A2
-
Nierman, W. C., and Chamberlin, M. J. (1980) Studies of RNA chain initiation by Escherichia coli RNA polymerase bound to T7 DNA. Direct analysis of the kinetics of RNA chain initiation at T7 promoter A2, J. Biol. Chem. 255, 1819-1823.
-
(1980)
J. Biol. Chem
, vol.255
, pp. 1819-1823
-
-
Nierman, W.C.1
Chamberlin, M.J.2
-
50
-
-
0038690474
-
Regulation by proteolysis in bacterial cells
-
Jenal, U., and Hengge-Aronis, R. (2003) Regulation by proteolysis in bacterial cells, Curr. Opin. Microbiol. 6, 163-172.
-
(2003)
Curr. Opin. Microbiol
, vol.6
, pp. 163-172
-
-
Jenal, U.1
Hengge-Aronis, R.2
-
51
-
-
33745838984
-
The RNA degradosome: Life in the fast lane of adaptive molecular evolution
-
Marcaida, M. J., DePristo, M. A., Chandran, V., Carpousis, A. J., and Luisi, B. F. (2006) The RNA degradosome: life in the fast lane of adaptive molecular evolution, Trends Biochem. Sci. 31, 359-365.
-
(2006)
Trends Biochem. Sci
, vol.31
, pp. 359-365
-
-
Marcaida, M.J.1
DePristo, M.A.2
Chandran, V.3
Carpousis, A.J.4
Luisi, B.F.5
-
52
-
-
33748753648
-
Widespread, but Non-identical, Association of Proteasomal 19 and 20 S Proteins with Yeast Chromatin
-
Sikder, D., Johnston, S. A., and Kodadek, T. (2006) Widespread, but Non-identical, Association of Proteasomal 19 and 20 S Proteins with Yeast Chromatin, J. Biol. Chem. 281, 27346-27355.
-
(2006)
J. Biol. Chem
, vol.281
, pp. 27346-27355
-
-
Sikder, D.1
Johnston, S.A.2
Kodadek, T.3
-
53
-
-
0029985489
-
Mutational analysis of the Escherichia coli spoT gene identifies distinct but overlapping regions involved in ppGpp synthesis and degradation
-
Gentry, D. R., and Cashel, M. (1996) Mutational analysis of the Escherichia coli spoT gene identifies distinct but overlapping regions involved in ppGpp synthesis and degradation, Mol. Microbiol. 19, 1373-1384.
-
(1996)
Mol. Microbiol
, vol.19
, pp. 1373-1384
-
-
Gentry, D.R.1
Cashel, M.2
-
54
-
-
1342324078
-
Escherichia coli proton-translocating FOF1-ATP synthase and its association with solute secondary transporters and/or enzymes of anaerobic oxidation-reduction under fermentation
-
Trchounian, A. (2004) Escherichia coli proton-translocating FOF1-ATP synthase and its association with solute secondary transporters and/or enzymes of anaerobic oxidation-reduction under fermentation, Biochem. Biophys. Res. Commun. 315, 1051-1057.
-
(2004)
Biochem. Biophys. Res. Commun
, vol.315
, pp. 1051-1057
-
-
Trchounian, A.1
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