메뉴 건너뛰기




Volumn 23, Issue 1, 2007, Pages 9-20

Computational analysis of genetic loci required for amphid structure and functions and their possibly corresponding microRNAs in C. elegans

Author keywords

C. Elegans; Cilia structure; Computational analysis; Interneuron; microRNA; Sensory neuron

Indexed keywords

MICRORNA;

EID: 33847785158     PISSN: 16737067     EISSN: None     Source Type: Journal    
DOI: 10.1007/s12264-007-0002-5     Document Type: Article
Times cited : (7)

References (32)
  • 1
    • 0347444723 scopus 로고    scopus 로고
    • MicroRNAs: Genomics, biogenesis, mechanism, and function
    • Bartel DP. MicroRNAs: Genomics, biogenesis, mechanism, and function. Cell 2004, 116: 281-297.
    • (2004) Cell , vol.116 , pp. 281-297
    • Bartel, D.P.1
  • 2
    • 0347906099 scopus 로고    scopus 로고
    • Towards a complete description of the microRNA complement of animal genomes
    • Brennecke J, Cohen SM. Towards a complete description of the microRNA complement of animal genomes. Genome Biol 2003, 4: 228.
    • (2003) Genome Biol , vol.4 , pp. 228
    • Brennecke, J.1    Cohen, S.M.2
  • 3
    • 0027751663 scopus 로고
    • The C. elegans heterochromic gene lin-4 encodes small RNA with antisens complementary to lin-14
    • Lee RC, Feinbaum RL, Ambros V. The C. elegans heterochromic gene lin-4 encodes small RNA with antisens complementary to lin-14. Cell 1993, 75: 843-854.
    • (1993) Cell , vol.75 , pp. 843-854
    • Lee, R.C.1    Feinbaum, R.L.2    Ambros, V.3
  • 4
  • 5
    • 2442604466 scopus 로고    scopus 로고
    • Viral virulence protein suppresses RNA silencing-mediated defense but upregulates the role of microrna in host gene expression
    • Chen J, Li WX, Xie D, Peng JR, Ding SW. Viral virulence protein suppresses RNA silencing-mediated defense but upregulates the role of microrna in host gene expression. Plant Cell 2004, 16: 1302-1313.
    • (2004) Plant Cell , vol.16 , pp. 1302-1313
    • Chen, J.1    Li, W.X.2    Xie, D.3    Peng, J.R.4    Ding, S.W.5
  • 6
    • 33747851117 scopus 로고    scopus 로고
    • MicroRNA: Biogenetic and functional mechanisms and involvements in cell differentiation and cancer
    • Tsuchiya S, Okuno Y, Tsujimoto G. MicroRNA: biogenetic and functional mechanisms and involvements in cell differentiation and cancer. J Pharmacol Sci 2006, 101: 267-270.
    • (2006) J Pharmacol Sci , vol.101 , pp. 267-270
    • Tsuchiya, S.1    Okuno, Y.2    Tsujimoto, G.3
  • 8
    • 0037205228 scopus 로고    scopus 로고
    • HEN-1, a secretory protein with an LDL receptor motif, regulates sensory integration and learning in Caenorhabditis elegans
    • Ishihara T, Iino Y, Mohri A, Mori I, Gengyo-Ando K, Mitani S, et al. HEN-1, a secretory protein with an LDL receptor motif, regulates sensory integration and learning in Caenorhabditis elegans. Cell 2002, 109: 639-649.
    • (2002) Cell , vol.109 , pp. 639-649
    • Ishihara, T.1    Iino, Y.2    Mohri, A.3    Mori, I.4    Gengyo-Ando, K.5    Mitani, S.6
  • 9
    • 4043072675 scopus 로고    scopus 로고
    • Chang S, Johnston RJ Jr, Frokjaer-Jensen C, Lockery S, Hobert O. MicroRNAs act sequentially and asymmetrically to control chemosensory laterality in the nematode. Nature 2004, 430: 785-789.v
    • Chang S, Johnston RJ Jr, Frokjaer-Jensen C, Lockery S, Hobert O. MicroRNAs act sequentially and asymmetrically to control chemosensory laterality in the nematode. Nature 2004, 430: 785-789.v
  • 10
    • 33644750115 scopus 로고    scopus 로고
    • Griffiths-Jones S, Grocock RJ, van Dongen S, Bateman A, Enright AJ. miRBase: microRNA sequences, targets and gene nomenclature. Nucleic Acids Res 2006, 34 (Database issue): D140-D144.
    • Griffiths-Jones S, Grocock RJ, van Dongen S, Bateman A, Enright AJ. miRBase: microRNA sequences, targets and gene nomenclature. Nucleic Acids Res 2006, 34 (Database issue): D140-D144.
  • 11
    • 0033576579 scopus 로고    scopus 로고
    • Regulation of lifespan by sensory perception in Caenorhabditis elegans
    • Apfeld J, Kenyon C. Regulation of lifespan by sensory perception in Caenorhabditis elegans. Nature 1999, 402: 804-809.
    • (1999) Nature , vol.402 , pp. 804-809
    • Apfeld, J.1    Kenyon, C.2
  • 12
    • 0000569744 scopus 로고    scopus 로고
    • Chemotaxis and thermotaxis
    • Eds, II. New York: Cold Springs Harbor Laboratory Press
    • Bargmann CI, Mori I. Chemotaxis and thermotaxis. In: Riddel DL, Blumenthal T, Meyer BJ, Priess JR (Eds.). C. elegans II. New York: Cold Springs Harbor Laboratory Press 1997, 717-737.
    • (1997) C. elegans , pp. 717-737
    • Bargmann, C.I.1    Mori, I.2
  • 13
    • 0032966884 scopus 로고    scopus 로고
    • Sensory activity affects sensory axon development in C. elegans
    • Peckol EL, Zallen JA, Yarrow JC, Bargmann CI. Sensory activity affects sensory axon development in C. elegans. Development 1999, 126: 1891-1902.
    • (1999) Development , vol.126 , pp. 1891-1902
    • Peckol, E.L.1    Zallen, J.A.2    Yarrow, J.C.3    Bargmann, C.I.4
  • 14
    • 0028067425 scopus 로고
    • Multiple chemosensory defects in daf-11 and daf-21 mutants of Caenorhabditis elegans
    • Vowels JJ, Thomas JH. Multiple chemosensory defects in daf-11 and daf-21 mutants of Caenorhabditis elegans. Genetics 1994, 138: 303-316.
    • (1994) Genetics , vol.138 , pp. 303-316
    • Vowels, J.J.1    Thomas, J.H.2
  • 15
    • 0037186030 scopus 로고    scopus 로고
    • Negative regulation and gain control of sensory neurons by the C. elegans calcineurin TAX-6
    • Kuhara A, Inada H, Katsura I, Mori I. Negative regulation and gain control of sensory neurons by the C. elegans calcineurin TAX-6. Neuron 2002, 33: 751-763.
    • (2002) Neuron , vol.33 , pp. 751-763
    • Kuhara, A.1    Inada, H.2    Katsura, I.3    Mori, I.4
  • 16
    • 33748787713 scopus 로고    scopus 로고
    • Both insulin and calcium channel signaling are required for developmental regulation of serotonin synthesis in the chemosensory ADF neurons of Caenorhabditis elegans
    • Estevez AO, Cowie RH, Gardner KL, Estevez M. Both insulin and calcium channel signaling are required for developmental regulation of serotonin synthesis in the chemosensory ADF neurons of Caenorhabditis elegans. Dev Biol 2006, 298: 32-44.
    • (2006) Dev Biol , vol.298 , pp. 32-44
    • Estevez, A.O.1    Cowie, R.H.2    Gardner, K.L.3    Estevez, M.4
  • 17
    • 0037137698 scopus 로고    scopus 로고
    • The cyclic GMP-dependent protein kinase EGL-4 regulates olfactory adaptation in C. elegans
    • L'Etoile ND, Coburn CM, Eastham J, Kistler A, Gallegos G, Bargmann CI. The cyclic GMP-dependent protein kinase EGL-4 regulates olfactory adaptation in C. elegans. Neuron 2002, 36: 1079-1089.
    • (2002) Neuron , vol.36 , pp. 1079-1089
    • L'Etoile, N.D.1    Coburn, C.M.2    Eastham, J.3    Kistler, A.4    Gallegos, G.5    Bargmann, C.I.6
  • 18
    • 0033559456 scopus 로고    scopus 로고
    • Distinct signaling pathways mediate touch and osmosensory responses in a polymodal sensory neuron
    • Hart AC, Kass J, Shapiro JE, Kaplan JM. Distinct signaling pathways mediate touch and osmosensory responses in a polymodal sensory neuron. J Neurosci 1999, 19: 1952-1958.
    • (1999) J Neurosci , vol.19 , pp. 1952-1958
    • Hart, A.C.1    Kass, J.2    Shapiro, J.E.3    Kaplan, J.M.4
  • 19
    • 1842524194 scopus 로고    scopus 로고
    • Worms taste bitter: ASH neurons, QUI-1, GPA-3 and ODR-3 mediate quinine avoidance in Caenorhabditis elegans
    • Hilliard MA, Bergamasco C, Arbucci S, Plasterk RH, Bazzicalupo P. Worms taste bitter: ASH neurons, QUI-1, GPA-3 and ODR-3 mediate quinine avoidance in Caenorhabditis elegans. EMBO J, 2004, 23: 1101-1111.
    • (2004) EMBO J , vol.23 , pp. 1101-1111
    • Hilliard, M.A.1    Bergamasco, C.2    Arbucci, S.3    Plasterk, R.H.4    Bazzicalupo, P.5
  • 20
    • 13244275002 scopus 로고    scopus 로고
    • In vivo imaging of C. elegans ASH neurons: Cellular response and adaptation to chemical repellents
    • Hilliard MA, Apicella AJ, Kerr R, Suzuki H, Bazzicalupo P, Schafer WR. In vivo imaging of C. elegans ASH neurons: cellular response and adaptation to chemical repellents. EMBO J 2005, 24: 63-72.
    • (2005) EMBO J , vol.24 , pp. 63-72
    • Hilliard, M.A.1    Apicella, A.J.2    Kerr, R.3    Suzuki, H.4    Bazzicalupo, P.5    Schafer, W.R.6
  • 21
    • 0034799894 scopus 로고    scopus 로고
    • The lin-11 LIM homeobox gene specifies olfactory and chemosensory neuron fates in C. elegans
    • Sarafi-Reinach TR, Melkman T, Hobert O, Sengupta P. The lin-11 LIM homeobox gene specifies olfactory and chemosensory neuron fates in C. elegans. Development 2001, 128: 3269-3281.
    • (2001) Development , vol.128 , pp. 3269-3281
    • Sarafi-Reinach, T.R.1    Melkman, T.2    Hobert, O.3    Sengupta, P.4
  • 22
    • 3042738924 scopus 로고    scopus 로고
    • Loss of C. elegans BBS-7 and BBS-8 protein function results in cilia defects and compromised intraflagellar transport
    • Blacque OE, Reardon MJ, Li C, McCarthy J, Mahjoub MR, Ansley SJ, et al. Loss of C. elegans BBS-7 and BBS-8 protein function results in cilia defects and compromised intraflagellar transport. Genes Dev 2004, 18: 1630-1642.
    • (2004) Genes Dev , vol.18 , pp. 1630-1642
    • Blacque, O.E.1    Reardon, M.J.2    Li, C.3    McCarthy, J.4    Mahjoub, M.R.5    Ansley, S.J.6
  • 23
    • 0033384875 scopus 로고    scopus 로고
    • Control of DAF-7 TGF-(alpha) expression and neuronal process development by a receptor tyrosine kinase KIN-8 in Caenorhabditis elegans
    • Koga M, Take-uchi M, Tameishi T, Ohshima Y. Control of DAF-7 TGF-(alpha) expression and neuronal process development by a receptor tyrosine kinase KIN-8 in Caenorhabditis elegans. Development 1999, 126: 5387-5398.
    • (1999) Development , vol.126 , pp. 5387-5398
    • Koga, M.1    Take-uchi, M.2    Tameishi, T.3    Ohshima, Y.4
  • 24
    • 23044496671 scopus 로고    scopus 로고
    • An interneuronal chemoreceptor required for olfactory imprinting in C. elegans
    • Remy JJ, Hobert O. An interneuronal chemoreceptor required for olfactory imprinting in C. elegans. Science 2005, 309: 787-790.
    • (2005) Science , vol.309 , pp. 787-790
    • Remy, J.J.1    Hobert, O.2
  • 25
    • 0034743423 scopus 로고    scopus 로고
    • A regulatory cascade of three homeobox genes, ceh-10, ttx-3 and ceh-23, controls cell fate specification of a defined interneuron class in C. elegans
    • Altun-Gultekin Z, Andachi Y, Tsalik EL, Pilgrim D, Kohara Y, Hobert O. A regulatory cascade of three homeobox genes, ceh-10, ttx-3 and ceh-23, controls cell fate specification of a defined interneuron class in C. elegans. Development 2001, 128: 1951-1969.
    • (2001) Development , vol.128 , pp. 1951-1969
    • Altun-Gultekin, Z.1    Andachi, Y.2    Tsalik, E.L.3    Pilgrim, D.4    Kohara, Y.5    Hobert, O.6
  • 26
    • 0032520848 scopus 로고    scopus 로고
    • Control of neural development and function in a thermoregulatory network by the LIM homeobox gene lin-11
    • Hobert O, D'Alberti T, Liu Y, Ruvkun G. Control of neural development and function in a thermoregulatory network by the LIM homeobox gene lin-11. J Neurosci 1998, 18: 2084-2096.
    • (1998) J Neurosci , vol.18 , pp. 2084-2096
    • Hobert, O.1    D'Alberti, T.2    Liu, Y.3    Ruvkun, G.4
  • 27
    • 33748068817 scopus 로고    scopus 로고
    • The insulin/PI 3-kinase pathway regulates salt chemotaxis learning in Caenorhabditis elegans
    • Tomioka M, Adachi T, Suzuki H, Kunitomo H, Schafer WR, lino Y. The insulin/PI 3-kinase pathway regulates salt chemotaxis learning in Caenorhabditis elegans. Neuron 2006, 51: 613-625.
    • (2006) Neuron , vol.51 , pp. 613-625
    • Tomioka, M.1    Adachi, T.2    Suzuki, H.3    Kunitomo, H.4    Schafer, W.R.5    lino, Y.6
  • 28
    • 0034121775 scopus 로고    scopus 로고
    • Patterton HG, Graves S. DNAassist, a C++ program for editing and analysis of nucleic acid and protein sequences on PC-compatible computers running Windows 95, 98, NT4.0 or 2000. Biotechniques 2000, 28: 1192-1197.
    • Patterton HG, Graves S. DNAassist, a C++ program for editing and analysis of nucleic acid and protein sequences on PC-compatible computers running Windows 95, 98, NT4.0 or 2000. Biotechniques 2000, 28: 1192-1197.
  • 29
    • 33847790271 scopus 로고    scopus 로고
    • Computational analysis of genetic loci required for synapse structure and function and their corresponding microRNAs in C. elegans
    • Sun Y, Zhao YN, Wang DY. Computational analysis of genetic loci required for synapse structure and function and their corresponding microRNAs in C. elegans. Neurosci Bull 2006, 22: 339-349.
    • (2006) Neurosci Bull , vol.22 , pp. 339-349
    • Sun, Y.1    Zhao, Y.N.2    Wang, D.Y.3
  • 30
    • 33847768001 scopus 로고    scopus 로고
    • Learning and learning choice in the nematode Caenorhabditis elegans
    • Ye HY, Ye BP, Wang DY. Learning and learning choice in the nematode Caenorhabditis elegans. Neurosci Bull 2006, 22: 355-360.
    • (2006) Neurosci Bull , vol.22 , pp. 355-360
    • Ye, H.Y.1    Ye, B.P.2    Wang, D.Y.3
  • 32
    • 0142074784 scopus 로고    scopus 로고
    • LIM homeobox gene-dependent expression of biogenic amine receptors in restricted regions of the C. elegans nervous system
    • Tsalik EL, Niacaris T, Wenick AS, Pau K, Avery L, Hobert O. LIM homeobox gene-dependent expression of biogenic amine receptors in restricted regions of the C. elegans nervous system. Dev Biol 2003, 263: 81-102.
    • (2003) Dev Biol , vol.263 , pp. 81-102
    • Tsalik, E.L.1    Niacaris, T.2    Wenick, A.S.3    Pau, K.4    Avery, L.5    Hobert, O.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.